RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 CABS1Q96KC9 395 aa5.87□□□□□ -1.47
SCN1A-201ENST00000303395 IQCGQ9H095 443 aaKnown RBP5.87□□□□□ -1.47
SCN1A-201ENST00000303395 GGA2Q9UJY4 613 aa5.87□□□□□ -1.47
SCN1A-201ENST00000303395 ZBTB16Q05516 673 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 BIRC3Q13489 604 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 MAATS1Q7Z4T9 603 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 NUMA1Q14980 2115 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 AK9Q5TCS8 1911 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 SLC4A2P04920 1241 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 TMOD2Q9NZR1 351 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 FOSBP53539 338 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 UBASH3AP57075 661 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 MAP3K7CLP57077 242 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 ICE2Q659A1 982 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 IQCA1Q86XH1 822 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 CCDC28BQ9BUN5 200 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 LMBRD1Q9NUN5 540 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 MRVI1Q9Y6F6 885 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 PTPRKQ15262 1439 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 AKR1B15C9JRZ8 316 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 ZNF853P0CG23 659 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 SYT1P21579 422 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 RPL13P26373 211 aaKnown RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 NEK1Q96PY6 1258 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 SPZ1Q9BXG8 430 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 DDX41Q9UJV9 622 aaKnown RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 CFAP73A6NFT4 308 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 BCAR3O75815 825 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 IL15P40933 162 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 SPTY2D1Q68D10 685 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 TTLL7Q6ZT98 887 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 LINS1Q8NG48 757 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 MIS12Q9H081 205 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 MORC2Q9Y6X9 1032 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 CCDC169A6NNP5 214 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 SPTLC2O15270 562 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 RLBP1P12271 317 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 SCP2P22307 547 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 PRR16Q569H4 304 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 THEMISQ8N1K5 641 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 RRP36Q96EU6 259 aaKnown RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 FOXP3Q9BZS1 431 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 PFDN4Q9NQP4 134 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 DISP3Q9P2K9 1392 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 E7ENQ6 273 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 CHUKO15111 745 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 EEF1GP26641 437 aaKnown RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 TTLL12Q14166 644 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 ZSCAN26Q16670 478 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 DHX32Q7L7V1 743 aaKnown RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 EIF1ADQ8N9N8 165 aaKnown RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 ZNF274Q96GC6 653 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 OSBPL5Q9H0X9 879 aaPredicted RBP5.86□□□□□ -1.47
SCN1A-201ENST00000303395 NDUFA13Q9P0J0 144 aa5.86□□□□□ -1.47
SCN1A-201ENST00000303395 SASH1O94885 1247 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 GKAP1Q5VSY0 366 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-201ENST00000303395 ADALQ6DHV7 355 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 ZNF365Q70YC5 407 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 CALML4Q96GE6 196 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 RMDN2Q96LZ7 410 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 HAUS2Q9NVX0 235 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 MXRA7P84157 204 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 CUL1Q13616 776 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 BAG1Q99933 345 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-201ENST00000303395 VEZTQ9HBM0 779 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 LDHCP07864 332 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 MAP3K12Q12852 859 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 FGFR1OP2Q9NVK5 253 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCN1A-201ENST00000303395 TTC16Q8NEE8 873 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 DSCC1Q9BVC3 393 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 RPL26L1Q9UNX3 145 aaKnown RBP5.85□□□□□ -1.47
SCN1A-201ENST00000303395 GGT6Q6P531 493 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 SEPT14Q6ZU15 432 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 MRPL50Q8N5N7 158 aaKnown RBP5.85□□□□□ -1.47
SCN1A-201ENST00000303395 PRPF38AQ8NAV1 312 aaKnown RBP5.85□□□□□ -1.47
SCN1A-201ENST00000303395 POLR3EQ9NVU0 708 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 GJB2P29033 226 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 TAF12Q16514 161 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 PANX2Q96RD6 677 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 OSBPL9Q96SU4 736 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 ANKFY1Q9P2R3 1169 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 ERVK-7P63135 1459 aa5.85□□□□□ -1.47
SCN1A-201ENST00000303395 ABLIM1O14639 778 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 CTIFO43310 598 aaKnown RBP5.84□□□□□ -1.47
SCN1A-201ENST00000303395 HSPA8P11142 646 aaKnown RBP5.84□□□□□ -1.47
SCN1A-201ENST00000303395 HCLS1P14317 486 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-201ENST00000303395 IARSP41252 1262 aaKnown RBP5.84□□□□□ -1.47
SCN1A-201ENST00000303395 CFAP221Q4G0U5 840 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 CCDC186Q7Z3E2 898 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 NUP88Q99567 741 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-201ENST00000303395 HAUS7Q99871 368 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 RAI14Q9P0K7 980 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 EPHB4P54760 987 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 FYB2Q5VWT5 728 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.84□□□□□ -1.47
SCN1A-201ENST00000303395 DLC1Q96QB1 1528 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 SGSM2O43147 1006 aa5.84□□□□□ -1.47
SCN1A-201ENST00000303395 THAP12O43422 761 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms