RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ADCY7P51828 1080 aa20.02■□□□□ 0.8
CDC42EP3-201ENST00000295324 ZNF174Q15697 407 aa20.02■□□□□ 0.8
CDC42EP3-201ENST00000295324 SV2BQ7L1I2 683 aa20.02■□□□□ 0.8
CDC42EP3-201ENST00000295324 FAM212AQ96EL1 285 aa20.02■□□□□ 0.8
CDC42EP3-201ENST00000295324 GREM2Q9H772 168 aa20.02■□□□□ 0.8
CDC42EP3-201ENST00000295324 ERVV-1B6SEH8 477 aa20.02■□□□□ 0.79
CDC42EP3-201ENST00000295324 PDE8BO95263 885 aa20.02■□□□□ 0.79
CDC42EP3-201ENST00000295324 RPL13P26373 211 aaKnown RBP20.02■□□□□ 0.79
CDC42EP3-201ENST00000295324 TAOK3Q9H2K8 898 aa20.02■□□□□ 0.79
CDC42EP3-201ENST00000295324 USP17L12C9JPN9 530 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 USP17L21D6R901 530 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 CPA1P15085 419 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 CCDC97Q96F63 343 aaPredicted RBP20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 KRT25Q7Z3Z0 450 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 PLEKHF1Q96S99 279 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 MYCLP12524 364 aaPredicted RBP20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 PPARAQ07869 468 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 NAA15Q9BXJ9 866 aaKnown RBP20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 VWA3AA6NCI4 1184 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 MCM3P25205 808 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 ACTN2P35609 894 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 EHBP1Q8NDI1 1231 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 COPRSQ9NQ92 184 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 CCT6AP40227 531 aaKnown RBP20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 SNX14Q9Y5W7 946 aa20.01■□□□□ 0.79
CDC42EP3-201ENST00000295324 SEMA3EO15041 775 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 CYLC1P35663 651 aaPredicted RBP20■□□□□ 0.79
CDC42EP3-201ENST00000295324 FAM193AP78312 1265 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 RBM10P98175 930 aaKnown RBP20■□□□□ 0.79
CDC42EP3-201ENST00000295324 PABPC4Q13310 644 aaKnown RBP eCLIP20■□□□□ 0.79
CDC42EP3-201ENST00000295324 SLC5A4Q9NY91 659 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 ADCY5O95622 1261 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 NONOQ15233 471 aaKnown RBP eCLIP20■□□□□ 0.79
CDC42EP3-201ENST00000295324 CRACR2AQ9BSW2 395 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 SMTNP53814 917 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 PIGBQ92521 554 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 AFF2P51816 1311 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 PPP1R2P41236 205 aa20■□□□□ 0.79
CDC42EP3-201ENST00000295324 MAP9Q49MG5 647 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 PIK3AP1Q6ZUJ8 805 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 PDE6AP16499 860 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 PRPF4BQ13523 1007 aaKnown RBP19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 CC2D2BQ6DHV5 1058 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 FAM200AQ8TCP9 573 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 EAF2Q96CJ1 260 aaPredicted RBP19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 MRVI1Q9Y6F6 885 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 TET3O43151 1660 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 PLCD4Q9BRC7 762 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 HEG1Q9ULI3 1381 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 SCNN1DP51172 638 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 LRRC24Q50LG9 513 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 TAF3Q5VWG9 929 aa19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 DIS3L2Q8IYB7 885 aaKnown RBP19.99■□□□□ 0.79
CDC42EP3-201ENST00000295324 CIAO1O76071 339 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 SYT1P21579 422 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 ANO6Q4KMQ2 910 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 SYNMO15061 1565 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 PALLDQ8WX93 1383 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 PROSER3Q2NL68 480 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 AZI2Q9H6S1 392 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 CHMP2AO43633 222 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 LRSAM1Q6UWE0 723 aa19.98■□□□□ 0.79
CDC42EP3-201ENST00000295324 CFBP00751 764 aa19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 IFT74Q96LB3 600 aa19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 PLIN2Q99541 437 aa19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 TCP10L2B9ZVM9 353 aa19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 BTDP43251 543 aa19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 ZSCAN23Q3MJ62 389 aa19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 PNMA2Q9UL42 364 aa19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 CCNT1O60563 726 aaKnown RBP19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 GPR108Q9NPR9 543 aa19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 TRMT1Q9NXH9 659 aaKnown RBP19.97■□□□□ 0.79
CDC42EP3-201ENST00000295324 USH1GQ495M9 461 aa19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 MSANTD4Q8NCY6 345 aa19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 TAF12Q16514 161 aa19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 HAUS7Q99871 368 aa19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 FAM47AQ5JRC9 791 aa19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 HOMER2Q9NSB8 354 aa19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 ARID4AP29374 1257 aaPredicted RBP19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 IFNL3Q8IZI9 196 aa19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 CCDC102AQ96A19 550 aa19.96■□□□□ 0.79
CDC42EP3-201ENST00000295324 ARHGEF35A5YM69 484 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 CERKLQ49MI3 558 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 CCDC93Q567U6 631 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 TTC12Q9H892 705 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 NCOA5Q9HCD5 579 aaKnown RBP19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 PLA2R1Q13018 1463 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 KIFC2Q96AC6 838 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 ELP1O95163 1332 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 KCNQ4P56696 695 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 CEP83Q9Y592 693 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 E7EWF7 191 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 TXKP42681 527 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 RBM6P78332 1123 aaKnown RBP19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 ERFEQ4G0M1 354 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 HSP90AA4PQ58FG1 418 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 TTC38Q5R3I4 469 aa19.95■□□□□ 0.78
CDC42EP3-201ENST00000295324 AOPEPQ8N6M6 819 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms