RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 PICALMQ13492 652 aa10.96□□□□□ -0.65
TFF1-201ENST00000291527 SHROOM1Q2M3G4 852 aaPredicted RBP10.96□□□□□ -0.65
TFF1-201ENST00000291527 NOL9Q5SY16 702 aaKnown RBP10.96□□□□□ -0.65
TFF1-201ENST00000291527 SHISA4Q96DD7 197 aa10.96□□□□□ -0.65
TFF1-201ENST00000291527 API5Q9BZZ5 524 aaKnown RBP10.96□□□□□ -0.65
TFF1-201ENST00000291527 HMG20BQ9P0W2 317 aa10.96□□□□□ -0.65
TFF1-201ENST00000291527 ABCF2Q9UG63 623 aa10.96□□□□□ -0.65
TFF1-201ENST00000291527 DENND2AQ9ULE3 1009 aa10.96□□□□□ -0.65
TFF1-201ENST00000291527 GABRQQ9UN88 632 aa10.96□□□□□ -0.65
TFF1-201ENST00000291527 OSBPP22059 807 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 BTDP43251 543 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 PSMC4P43686 418 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 JAG1P78504 1218 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 SLC9C1Q4G0N8 1177 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 DCAF15Q66K64 600 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 ANKRD23Q86SG2 305 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 IDI2Q9BXS1 227 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 AFG3L2Q9Y4W6 797 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 DNAH12Q6ZR08 3092 aa10.95□□□□□ -0.66
TFF1-201ENST00000291527 ALPK3Q96L96 1907 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 LAMA3Q16787 3333 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 PEX10O60683 326 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 BCRP11274 1271 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 PTPRAP18433 802 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 MCAMP43121 646 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 MAP3K10Q02779 954 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 TMEM57Q8N5G2 664 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 FRAT1Q92837 279 aaPredicted RBP10.94□□□□□ -0.66
TFF1-201ENST00000291527 NEUROD6Q96NK8 337 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 C1orf115Q9H7X2 142 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 SNRKQ9NRH2 765 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 PCDH10Q9P2E7 1040 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 ZHX2Q9Y6X8 837 aa10.94□□□□□ -0.66
TFF1-201ENST00000291527 PLXNB2O15031 1838 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 MROH7-TTC4A0A0A0MT08 1334 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 RLBP1P12271 317 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 PRKCZQ05513 592 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 MTX1Q13505 466 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 SLC4A8Q2Y0W8 1093 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 HABP4Q5JVS0 413 aaKnown RBP10.93□□□□□ -0.66
TFF1-201ENST00000291527 TREML2Q5T2D2 321 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 GADL1Q6ZQY3 521 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 SCYL3Q8IZE3 742 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 FAM163AQ96GL9 167 aaPredicted RBP10.93□□□□□ -0.66
TFF1-201ENST00000291527 GNL3LQ9NVN8 582 aaKnown RBP10.93□□□□□ -0.66
TFF1-201ENST00000291527 SRRDQ9UH36 339 aa10.93□□□□□ -0.66
TFF1-201ENST00000291527 GPR75-ASB3A0A0A6YYF3 556 aa10.92□□□□□ -0.66
TFF1-201ENST00000291527 A0A0G2JLL6 359 aaPredicted RBP10.92□□□□□ -0.66
TFF1-201ENST00000291527 SEMA3EO15041 775 aa10.92□□□□□ -0.66
TFF1-201ENST00000291527 ENTPD3O75355 529 aa10.92□□□□□ -0.66
TFF1-201ENST00000291527 PRRT2Q7Z6L0 340 aaPredicted RBP10.92□□□□□ -0.66
TFF1-201ENST00000291527 DZIP1Q86YF9 867 aaKnown RBP10.92□□□□□ -0.66
TFF1-201ENST00000291527 ZSCAN29Q8IWY8 852 aaPredicted RBP10.92□□□□□ -0.66
TFF1-201ENST00000291527 SH3RF3Q8TEJ3 882 aaPredicted RBP10.92□□□□□ -0.66
TFF1-201ENST00000291527 ARHGAP45Q92619 1136 aa10.92□□□□□ -0.66
TFF1-201ENST00000291527 NSUN4Q96CB9 384 aaKnown RBP10.92□□□□□ -0.66
TFF1-201ENST00000291527 ZCCHC17Q9NP64 241 aaKnown RBP10.92□□□□□ -0.66
TFF1-201ENST00000291527 FOCADQ5VW36 1801 aa10.92□□□□□ -0.66
TFF1-201ENST00000291527 LOC285556D6RIA3 1793 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 TRIM75PA6NK02 468 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 H0YGN5 161 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 CCER2I3L3R5 266 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 CXCL11O14625 94 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 ZBTB22O15209 634 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 FMNL1O95466 1100 aaPredicted RBP10.91□□□□□ -0.66
TFF1-201ENST00000291527 CT47B1P0C2W7 299 aaPredicted RBP10.91□□□□□ -0.66
TFF1-201ENST00000291527 ELNP15502 786 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 ATF7IPQ6VMQ6 1270 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 SPATA5Q8NB90 893 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 HOOK2Q96ED9 719 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 DBNDD2Q9BQY9 259 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 TMEM106CQ9BVX2 250 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 TLR7Q9NYK1 1049 aaKnown RBP10.91□□□□□ -0.66
TFF1-201ENST00000291527 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
TFF1-201ENST00000291527 NDUFB9Q9Y6M9 179 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 COL6A3P12111 3177 aa10.91□□□□□ -0.66
TFF1-201ENST00000291527 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
TFF1-201ENST00000291527 MYPNQ86TC9 1320 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 GNAI2P04899 355 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 GNAI3P08754 354 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 CCL5P13501 91 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 ARID4AP29374 1257 aaPredicted RBP10.9□□□□□ -0.66
TFF1-201ENST00000291527 POLA2Q14181 598 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 UBE2Q1Q7Z7E8 422 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 NBPF11Q86T75 865 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 UNC93B1Q9H1C4 597 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 DNAJC18Q9H819 358 aa10.9□□□□□ -0.66
TFF1-201ENST00000291527 PIH1D3Q9NQM4 214 aaKnown RBP10.9□□□□□ -0.66
TFF1-201ENST00000291527 MYH1P12882 1939 aa10.9□□□□□ -0.67
TFF1-201ENST00000291527 PDS5AQ29RF7 1337 aaKnown RBP10.89□□□□□ -0.67
TFF1-201ENST00000291527 CYP2E1P05181 493 aaPredicted RBP10.89□□□□□ -0.67
TFF1-201ENST00000291527 GRK4P32298 578 aa10.89□□□□□ -0.67
TFF1-201ENST00000291527 FXR1P51114 621 aaKnown RBP eCLIP10.89□□□□□ -0.67
TFF1-201ENST00000291527 DYNLL1P63167 89 aaKnown RBP10.89□□□□□ -0.67
TFF1-201ENST00000291527 MVPQ14764 893 aaKnown RBP10.89□□□□□ -0.67
TFF1-201ENST00000291527 KIF22Q14807 665 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms