RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GPAA1O43292 621 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 DYMQ7RTS9 669 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 TRPC3Q13507 836 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 C8orf34Q49A92 452 aa13.33□□□□□ -0.28
SHPRH-201ENST00000275233 SEC24BO95487 1268 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 SH3TC1Q8TE82 1336 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 MAP7D1Q3KQU3 841 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 HAUS7Q99871 368 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 TRAPPC8Q9Y2L5 1435 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 ATP10BO94823 1461 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 POLR2DO15514 142 aaKnown RBP13.32□□□□□ -0.28
SHPRH-201ENST00000275233 SNX16P57768 344 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 E7EVH7 732 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 STX10O60499 249 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 RPL13P26373 211 aaKnown RBP13.32□□□□□ -0.28
SHPRH-201ENST00000275233 SMTNP53814 917 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 LONRF3Q496Y0 759 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 SEL1L2Q5TEA6 688 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 IFT74Q96LB3 600 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 DAPK3O43293 454 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 HSPA4P34932 840 aa13.32□□□□□ -0.28
SHPRH-201ENST00000275233 EIF4G3O43432 1585 aaKnown RBP13.31□□□□□ -0.28
SHPRH-201ENST00000275233 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 CCDC160A6NGH7 325 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 SPOPO43791 374 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 TNFAIP3P21580 790 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 PPP2R5CQ13362 524 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 ARHGEF35A5YM69 484 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 CFBP00751 764 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 KRT19P08727 400 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 GEN1Q17RS7 908 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 CCDC122Q5T0U0 273 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 NSMFQ6X4W1 530 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 SUCLG2Q96I99 432 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
SHPRH-201ENST00000275233 SPOUT1Q5T280 376 aaKnown RBP13.31□□□□□ -0.28
SHPRH-201ENST00000275233 ZBTB40Q9NUA8 1239 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 VPS18Q9P253 973 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 ELP1O95163 1332 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 ZNF518AQ6AHZ1 1483 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
SHPRH-201ENST00000275233 ERCC5P28715 1186 aaPredicted RBP13.31□□□□□ -0.28
SHPRH-201ENST00000275233 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 PPANQ9NQ55 473 aaKnown RBP13.31□□□□□ -0.28
SHPRH-201ENST00000275233 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 OPA1O60313 960 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 USP21Q9UK80 565 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 ZMYM3Q14202 1370 aa13.31□□□□□ -0.28
SHPRH-201ENST00000275233 SLC1A4P43007 532 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 DEXIO95424 95 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 CFAP157Q5JU67 520 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 GAS8O95995 478 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 GABPAQ06546 454 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 NELFCDQ8IXH7 590 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 KCNJ14Q9UNX9 436 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 TRPM2O94759 1503 aa13.3□□□□□ -0.28
SHPRH-201ENST00000275233 ZAP70P43403 619 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 TBC1D8BQ0IIM8 1120 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 BEND3Q5T5X7 828 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 SLC52A2Q9HAB3 445 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
SHPRH-201ENST00000275233 PARP10Q53GL7 1025 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 CMTR1Q8N1G2 835 aaKnown RBP13.29□□□□□ -0.28
SHPRH-201ENST00000275233 MYCT1Q8N699 235 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 NACA2Q9H009 215 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 ZBED4O75132 1171 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 CRCPO75575 148 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 ATP2A2P16615 1042 aaKnown RBP13.29□□□□□ -0.28
SHPRH-201ENST00000275233 STAMQ92783 540 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 PRIMPOLQ96LW4 560 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 SEC62Q99442 399 aaKnown RBP13.29□□□□□ -0.28
SHPRH-201ENST00000275233 CLSTN2Q9H4D0 955 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 CALUO43852 315 aaPredicted RBP13.29□□□□□ -0.28
SHPRH-201ENST00000275233 SPATA5Q8NB90 893 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 SNX21Q969T3 373 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 SMC6Q96SB8 1091 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 PAGR1Q9BTK6 254 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 ANO3Q9BYT9 981 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 ZNF532Q9HCE3 1301 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 PLCD1P51178 756 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 ASIC2Q16515 512 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 BAG1Q99933 345 aaPredicted RBP13.29□□□□□ -0.28
SHPRH-201ENST00000275233 STMN4Q9H169 189 aaPredicted RBP13.29□□□□□ -0.28
SHPRH-201ENST00000275233 TTLL3Q9Y4R7 772 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 USP19O94966 1318 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 GCNT3O95395 438 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 SLC8A3P57103 927 aa13.29□□□□□ -0.28
SHPRH-201ENST00000275233 PPIP5K2O43314 1243 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 SLU7O95391 586 aaKnown RBP13.28□□□□□ -0.28
SHPRH-201ENST00000275233 CCDC14Q49A88 953 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 TIGD1Q96MW7 591 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 MTUS1Q9ULD2 1270 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHPRH-201ENST00000275233 TPD52P55327 224 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms