RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 BCCIPQ9P287 314 aaKnown RBP eCLIP15.79■□□□□ 0.12
CDH3-201ENST00000264012 LUC7L2Q9Y383 392 aaKnown RBP15.79■□□□□ 0.12
CDH3-201ENST00000264012 ERBB3P21860 1342 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 POLR2DO15514 142 aaKnown RBP15.79■□□□□ 0.12
CDH3-201ENST00000264012 PDE6AP16499 860 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 ZNF445P59923 1031 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 HOOK3Q86VS8 718 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 KRT86O43790 486 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 HSPD1P10809 573 aaKnown RBP15.79■□□□□ 0.12
CDH3-201ENST00000264012 NEK11Q8NG66 645 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 EZRP15311 586 aaKnown RBP15.79■□□□□ 0.12
CDH3-201ENST00000264012 CALCOCO1Q9P1Z2 691 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 KCNJ14Q9UNX9 436 aa15.79■□□□□ 0.12
CDH3-201ENST00000264012 PHACTR2O75167 634 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 TCHPQ9BT92 498 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 ZSWIM6Q9HCJ5 1215 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 PRDM10Q9NQV6 1147 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
CDH3-201ENST00000264012 TET3O43151 1660 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 PRAMEF22A3QJZ6 481 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 ZNF202O95125 648 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 TFAP4Q01664 338 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 PPARAQ07869 468 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 TGFBRAP1Q8WUH2 860 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 PODXL2Q9NZ53 605 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 GYG1P46976 350 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 CTR9Q6PD62 1173 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 TBC1D22AQ8WUA7 517 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 LOC102724428A0A0B4J2F2 783 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 CTAGE9A4FU28 777 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 SIK1P57059 783 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 FCHSD1Q86WN1 690 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 ZNF274Q96GC6 653 aaPredicted RBP15.78■□□□□ 0.12
CDH3-201ENST00000264012 OSBPL3Q9H4L5 887 aa15.78■□□□□ 0.12
CDH3-201ENST00000264012 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
CDH3-201ENST00000264012 USP17L12C9JPN9 530 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 USP17L21D6R901 530 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 H0YIN7 160 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 SLU7O95391 586 aaKnown RBP15.77■□□□□ 0.12
CDH3-201ENST00000264012 KARSQ15046 597 aaKnown RBP15.77■□□□□ 0.12
CDH3-201ENST00000264012 CCDC65Q8IXS2 484 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 SRRTQ9BXP5 876 aaKnown RBP15.77■□□□□ 0.12
CDH3-201ENST00000264012 GREM2Q9H772 168 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 LZTFL1Q9NQ48 299 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 hCG_1642624A0A1W2PR95 340 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 NF2P35240 595 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 BCAMP50895 628 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 CNGA4Q8IV77 575 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 ZBTB21Q9ULJ3 1066 aa15.77■□□□□ 0.12
CDH3-201ENST00000264012 CCNT1O60563 726 aaKnown RBP15.77■□□□□ 0.11
CDH3-201ENST00000264012 B4DLN1 442 aa15.77■□□□□ 0.11
CDH3-201ENST00000264012 CCT6AP40227 531 aaKnown RBP15.77■□□□□ 0.11
CDH3-201ENST00000264012 KIAA0753Q2KHM9 967 aa15.77■□□□□ 0.11
CDH3-201ENST00000264012 GIGYF2Q6Y7W6 1299 aaKnown RBP15.77■□□□□ 0.11
CDH3-201ENST00000264012 UNC5CLQ8IV45 518 aa15.77■□□□□ 0.11
CDH3-201ENST00000264012 IFNL3Q8IZI9 196 aa15.77■□□□□ 0.11
CDH3-201ENST00000264012 PLVAPQ9BX97 442 aa15.77■□□□□ 0.11
CDH3-201ENST00000264012 PUS3Q9BZE2 481 aaKnown RBP15.77■□□□□ 0.11
CDH3-201ENST00000264012 TPCN1Q9ULQ1 816 aa15.77■□□□□ 0.11
CDH3-201ENST00000264012 WDR17Q8IZU2 1322 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 GCOM1H8Y6P7 765 aaPredicted RBP15.76■□□□□ 0.11
CDH3-201ENST00000264012 MYZAPP0CAP1 466 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 PDE4DQ08499 809 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 FAM47AQ5JRC9 791 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 GUCA1BQ9UMX6 200 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 MRVI1Q9Y6F6 885 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 GOLGA6L10A0A0M3HER8 536 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 PPP1R2P41236 205 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 TXKP42681 527 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 NONOQ15233 471 aaKnown RBP eCLIP15.76■□□□□ 0.11
CDH3-201ENST00000264012 ZNF654Q8IZM8 581 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 CBX8Q9HC52 389 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 ARHGEF10LQ9HCE6 1279 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 ADCY10Q96PN6 1610 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 SLC1A4P43007 532 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 MAATS1Q7Z4T9 603 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 ARFGAP3Q9NP61 516 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 CTNND2Q9UQB3 1225 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 TRAF5O00463 557 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 FGAP02671 866 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 ARHGAP31Q2M1Z3 1444 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 GLT8D2Q9H1C3 349 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 ARPP21Q9UBL0 812 aaPredicted RBP15.76■□□□□ 0.11
CDH3-201ENST00000264012 ZBTB1Q9Y2K1 713 aa15.76■□□□□ 0.11
CDH3-201ENST00000264012 SPDYE4A6NLX3 237 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 PDE8BO95263 885 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 TLR7Q9NYK1 1049 aaKnown RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 VPS54Q9P1Q0 977 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 RPL13P26373 211 aaKnown RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 MYSM1Q5VVJ2 828 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 KRT25Q7Z3Z0 450 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 BAG1Q99933 345 aaPredicted RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 LZTS2Q9BRK4 669 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDH3-201ENST00000264012 V9GYY5 206 aaPredicted RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 AKR1B15C9JRZ8 316 aaPredicted RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 MFSD14BQ5SR56 506 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms