RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 RFX7Q2KHR2 1363 aa25.83■■□□□ 1.73
CCNE1-201ENST00000262643 COL13A1Q5TAT6 717 aaPredicted RBP25.83■■□□□ 1.73
CCNE1-201ENST00000262643 SPRYD7Q5W111 196 aa25.83■■□□□ 1.73
CCNE1-201ENST00000262643 DCAF15Q66K64 600 aa25.83■■□□□ 1.73
CCNE1-201ENST00000262643 ZSCAN29Q8IWY8 852 aaPredicted RBP25.83■■□□□ 1.73
CCNE1-201ENST00000262643 ENTPD3O75355 529 aa25.83■■□□□ 1.73
CCNE1-201ENST00000262643 HSPA8P11142 646 aaKnown RBP25.83■■□□□ 1.73
CCNE1-201ENST00000262643 ELP3Q9H9T3 547 aa25.83■■□□□ 1.73
CCNE1-201ENST00000262643 UNCXA6NJT0 531 aa25.82■■□□□ 1.72
CCNE1-201ENST00000262643 MAP3K9P80192 1104 aa25.82■■□□□ 1.72
CCNE1-201ENST00000262643 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.82■■□□□ 1.72
CCNE1-201ENST00000262643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.82■■□□□ 1.72
CCNE1-201ENST00000262643 WRNIP1Q96S55 665 aa25.82■■□□□ 1.72
CCNE1-201ENST00000262643 BOLA2Q9H3K6 86 aa25.82■■□□□ 1.72
CCNE1-201ENST00000262643 BAG3O95817 575 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 CYP7A1P22680 504 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 MAP3K12Q12852 859 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 VGLL4Q14135 290 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 MAGEB6Q8N7X4 407 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 SH3RF3Q8TEJ3 882 aaPredicted RBP25.81■■□□□ 1.72
CCNE1-201ENST00000262643 WNK4Q96J92 1243 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 CSADQ9Y600 493 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 GOLIM4O00461 696 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 TEX11Q8IYF3 940 aa25.81■■□□□ 1.72
CCNE1-201ENST00000262643 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.81■■□□□ 1.72
CCNE1-201ENST00000262643 CA12O43570 354 aa25.8■■□□□ 1.72
CCNE1-201ENST00000262643 TTF1Q15361 905 aaPredicted RBP25.8■■□□□ 1.72
CCNE1-201ENST00000262643 EDC3Q96F86 508 aaKnown RBP25.8■■□□□ 1.72
CCNE1-201ENST00000262643 SH3BP5LQ7L8J4 393 aa25.8■■□□□ 1.72
CCNE1-201ENST00000262643 REM2Q8IYK8 340 aaPredicted RBP25.8■■□□□ 1.72
CCNE1-201ENST00000262643 ZKSCAN4Q969J2 545 aaPredicted RBP25.8■■□□□ 1.72
CCNE1-201ENST00000262643 ZNF341Q9BYN7 854 aa25.8■■□□□ 1.72
CCNE1-201ENST00000262643 DOCK2Q92608 1830 aa25.79■■□□□ 1.72
CCNE1-201ENST00000262643 DDTLA6NHG4 134 aaPredicted RBP25.79■■□□□ 1.72
CCNE1-201ENST00000262643 IGSF3O75054 1194 aa25.79■■□□□ 1.72
CCNE1-201ENST00000262643 TRPA1O75762 1119 aa25.79■■□□□ 1.72
CCNE1-201ENST00000262643 ATP5JP18859 108 aa25.79■■□□□ 1.72
CCNE1-201ENST00000262643 MAP4K4O95819 1239 aaPredicted RBP25.78■■□□□ 1.72
CCNE1-201ENST00000262643 ZBTB48P10074 688 aaPredicted RBP25.78■■□□□ 1.72
CCNE1-201ENST00000262643 CNKSR2Q8WXI2 1034 aa25.78■■□□□ 1.72
CCNE1-201ENST00000262643 OPTNQ96CV9 577 aa25.78■■□□□ 1.72
CCNE1-201ENST00000262643 RNF186Q9NXI6 227 aa25.78■■□□□ 1.72
CCNE1-201ENST00000262643 GJA5P36382 358 aa25.78■■□□□ 1.72
CCNE1-201ENST00000262643 MIGA1Q8NAN2 632 aa25.78■■□□□ 1.72
CCNE1-201ENST00000262643 PLCG2P16885 1265 aa25.77■■□□□ 1.72
CCNE1-201ENST00000262643 PPP4CP60510 307 aa25.77■■□□□ 1.72
CCNE1-201ENST00000262643 DYNLL1P63167 89 aaKnown RBP25.77■■□□□ 1.72
CCNE1-201ENST00000262643 C8orf34Q49A92 452 aa25.77■■□□□ 1.72
CCNE1-201ENST00000262643 PAG1Q9NWQ8 432 aa25.77■■□□□ 1.72
CCNE1-201ENST00000262643 SREBF2Q12772 1141 aa25.76■■□□□ 1.72
CCNE1-201ENST00000262643 PRDM10Q9NQV6 1147 aa25.76■■□□□ 1.72
CCNE1-201ENST00000262643 SLURP2P0DP57 97 aa25.76■■□□□ 1.71
CCNE1-201ENST00000262643 INPP5BP32019 993 aa25.76■■□□□ 1.71
CCNE1-201ENST00000262643 OSBPL5Q9H0X9 879 aaPredicted RBP25.76■■□□□ 1.71
CCNE1-201ENST00000262643 NPM3O75607 178 aaKnown RBP25.75■■□□□ 1.71
CCNE1-201ENST00000262643 TM4SF4P48230 202 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 SLC9C2Q5TAH2 1124 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 TSHZ3Q63HK5 1081 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 TGFBRAP1Q8WUH2 860 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 OTUD5Q96G74 571 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 HAUS7Q99871 368 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 ECHDC1Q9NTX5 307 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 SNCAIPQ9Y6H5 919 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 ATRNL1Q5VV63 1379 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 MAPKAPK5Q8IW41 473 aa25.75■■□□□ 1.71
CCNE1-201ENST00000262643 MANSC4A6NHS7 340 aaPredicted RBP25.74■■□□□ 1.71
CCNE1-201ENST00000262643 SAGE1Q9NXZ1 904 aa25.74■■□□□ 1.71
CCNE1-201ENST00000262643 PDE6AP16499 860 aa25.73■■□□□ 1.71
CCNE1-201ENST00000262643 GPATCH3Q96I76 525 aa25.73■■□□□ 1.71
CCNE1-201ENST00000262643 CDK5RAP2Q96SN8 1893 aa25.73■■□□□ 1.71
CCNE1-201ENST00000262643 ZNF112Q9UJU3 913 aa25.73■■□□□ 1.71
CCNE1-201ENST00000262643 FLT1P17948 1338 aa25.72■■□□□ 1.71
CCNE1-201ENST00000262643 SPDYE5A6NIY4 337 aa25.71■■□□□ 1.71
CCNE1-201ENST00000262643 ZBTB47Q9UFB7 747 aaPredicted RBP25.71■■□□□ 1.71
CCNE1-201ENST00000262643 ZNF532Q9HCE3 1301 aa25.71■■□□□ 1.71
CCNE1-201ENST00000262643 CASP8AP2Q9UKL3 1982 aa25.71■■□□□ 1.71
CCNE1-201ENST00000262643 FAM196BA6NMK8 535 aa25.71■■□□□ 1.71
CCNE1-201ENST00000262643 TMED8Q6PL24 325 aaPredicted RBP25.71■■□□□ 1.71
CCNE1-201ENST00000262643 ERO1BQ86YB8 467 aa25.71■■□□□ 1.71
CCNE1-201ENST00000262643 INHBEP58166 350 aa25.7■■□□□ 1.7
CCNE1-201ENST00000262643 OTUD7AQ8TE49 926 aaPredicted RBP25.7■■□□□ 1.7
CCNE1-201ENST00000262643 PHF20L1A8MW92 1017 aa25.7■■□□□ 1.7
CCNE1-201ENST00000262643 TBC1D8O95759 1140 aa25.69■■□□□ 1.7
CCNE1-201ENST00000262643 COL2A1P02458 1487 aaPredicted RBP25.69■■□□□ 1.7
CCNE1-201ENST00000262643 SLFNL1Q499Z3 407 aa25.69■■□□□ 1.7
CCNE1-201ENST00000262643 FOCADQ5VW36 1801 aa25.69■■□□□ 1.7
CCNE1-201ENST00000262643 IFNL1Q8IU54 200 aa25.69■■□□□ 1.7
CCNE1-201ENST00000262643 SAP30BPQ9UHR5 308 aaKnown RBP25.69■■□□□ 1.7
CCNE1-201ENST00000262643 MAGEB6P1A0A0J9YX57 407 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 USP5P45974 858 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 SLC4A8Q2Y0W8 1093 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 CERS3Q8IU89 383 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 TNS4Q8IZW8 715 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.68■■□□□ 1.7
CCNE1-201ENST00000262643 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.68■■□□□ 1.7
CCNE1-201ENST00000262643 PALD1Q9ULE6 856 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 TCRBV5S4A2TA0A5A2 114 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 IGF2BP3O00425 579 aaKnown RBP eCLIP25.68■■□□□ 1.7
CCNE1-201ENST00000262643 IRF6O14896 467 aa25.68■■□□□ 1.7
CCNE1-201ENST00000262643 MAP3K10Q02779 954 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms