RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 YEATS4O95619 227 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 UTP14CQ5TAP6 766 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 KRT40Q6A162 431 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 ZNF397Q8NF99 534 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 DDX41Q9UJV9 622 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 ERICH4A6NGS2 130 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 SUSD4Q5VX71 490 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 DEFB132Q7Z7B7 95 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 MB21D2Q8IYB1 491 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 CMTR1Q8N1G2 835 aaKnown RBP16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 ZKSCAN3Q9BRR0 538 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 GPR108Q9NPR9 543 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 NRAPQ86VF7 1730 aa16.69■□□□□ 0.26
SFSWAP-201ENST00000261674 EN1Q05925 392 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 BRAPQ7Z569 592 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 ERO1AQ96HE7 468 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 CNNM3Q8NE01 707 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 MROH7-TTC4A0A0A0MT08 1334 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 UBN2Q6ZU65 1347 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 RFX7Q2KHR2 1363 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 AXDND1Q5T1B0 1012 aaPredicted RBP16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 OLFM4Q6UX06 510 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
SFSWAP-201ENST00000261674 ZFYP08048 801 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 CMA1P23946 247 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 IARSP41252 1262 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 ARHGEF1Q92888 912 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.67■□□□□ 0.265e-11■□□□□ 9.7
SFSWAP-201ENST00000261674 TFCP2L1Q9NZI6 479 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 ANGEL1Q9UNK9 670 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 TMEM232C9JQI7 657 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 FOXN1O15353 648 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 ZPR1O75312 459 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 CDC27P30260 824 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 RFC4P35249 363 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 MCAMP43121 646 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 TBC1D10CQ8IV04 446 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 KRT222Q8N1A0 295 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 CCDC150Q8NCX0 1101 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 MNS1Q8NEH6 495 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 FANCLQ9NW38 375 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 RTCBQ9Y3I0 505 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 MRC1P22897 1456 aa16.67■□□□□ 0.26
SFSWAP-201ENST00000261674 ATRNO75882 1429 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 ARHGAP29Q52LW3 1261 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 GOLGA8AA7E2F4 631 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 IRS4O14654 1257 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 TOP1P11387 765 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 SLC39A14Q15043 492 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 PROM2Q8N271 834 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 OSBPL5Q9H0X9 879 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 ZBTB43O43298 467 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 LONRF3Q496Y0 759 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 AIDAQ96BJ3 306 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 GREM2Q9H772 168 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 IMPACTQ9P2X3 320 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 KCNJ14Q9UNX9 436 aa16.66■□□□□ 0.26
SFSWAP-201ENST00000261674 IFIT3O14879 490 aaKnown RBP16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 ITGA6P23229 1130 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 NCAPHQ15003 741 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 SHC4Q6S5L8 630 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 JMYQ8N9B5 988 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 SEC31BQ9NQW1 1179 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 ITGB4P16144 1822 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 SYCP1Q15431 976 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 CREBRFQ8IUR6 639 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 NUP133Q8WUM0 1156 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 EPC1Q9H2F5 836 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 PCDHA5Q9Y5H7 936 aa16.65■□□□□ 0.26
SFSWAP-201ENST00000261674 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.26
SFSWAP-201ENST00000261674 TRMT44Q8IYL2 757 aaKnown RBP16.64■□□□□ 0.26
SFSWAP-201ENST00000261674 UBXN4Q92575 508 aa16.64■□□□□ 0.26
SFSWAP-201ENST00000261674 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 MYL5Q02045 173 aa16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 CCDC102BQ68D86 513 aa16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 APOA5Q6Q788 366 aa16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 KIF2AO00139 706 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 CIAO1O76071 339 aa16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 PHKA1P46020 1223 aa16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 GRAMD1CQ8IYS0 662 aa16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 PIH1D3Q9NQM4 214 aaKnown RBP16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
SFSWAP-201ENST00000261674 WTIPA6NIX2 430 aaPredicted RBP16.63■□□□□ 0.25
SFSWAP-201ENST00000261674 BTBD18B2RXH4 712 aa16.63■□□□□ 0.25
SFSWAP-201ENST00000261674 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms