RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ARID4AP29374 1257 aaPredicted RBP23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 MCAMP43121 646 aa23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 SSH3Q8TE77 659 aa23.43■■□□□ 1.34
TM6SF1-201ENST00000258909 ATRNL1Q5VV63 1379 aa23.42■■□□□ 1.34
TM6SF1-201ENST00000258909 SURF6O75683 361 aaKnown RBP23.42■■□□□ 1.34
TM6SF1-201ENST00000258909 SNRKQ9NRH2 765 aa23.42■■□□□ 1.34
TM6SF1-201ENST00000258909 RAI14Q9P0K7 980 aa23.42■■□□□ 1.34
TM6SF1-201ENST00000258909 GPR75-ASB3A0A0A6YYF3 556 aa23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 ZBTB7BO15156 539 aaPredicted RBP23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 ECM2O94769 699 aaPredicted RBP23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 RHBDL3P58872 404 aa23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 TNNI3KQ59H18 835 aa23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 NOL9Q5SY16 702 aaKnown RBP23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 NSUN4Q96CB9 384 aaKnown RBP23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 FPGT-TNNI3KV9GXZ4 949 aa23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 ZSWIM8A7E2V4 1837 aa23.41■■□□□ 1.34
TM6SF1-201ENST00000258909 PHF20L1A8MW92 1017 aa23.4■■□□□ 1.34
TM6SF1-201ENST00000258909 TLR2O60603 784 aa23.4■■□□□ 1.34
TM6SF1-201ENST00000258909 DBNDD2Q9BQY9 259 aa23.4■■□□□ 1.34
TM6SF1-201ENST00000258909 ZBED9Q6R2W3 1325 aa23.4■■□□□ 1.34
TM6SF1-201ENST00000258909 UQCRFS1P1P0C7P4 283 aa23.39■■□□□ 1.34
TM6SF1-201ENST00000258909 LRP2BPQ9P2M1 347 aa23.39■■□□□ 1.34
TM6SF1-201ENST00000258909 KCNH4Q9UQ05 1017 aa23.39■■□□□ 1.34
TM6SF1-201ENST00000258909 TTC39AQ5SRH9 613 aa23.38■■□□□ 1.33
TM6SF1-201ENST00000258909 ARHGAP39Q9C0H5 1083 aa23.38■■□□□ 1.33
TM6SF1-201ENST00000258909 ZCCHC17Q9NP64 241 aaKnown RBP23.38■■□□□ 1.33
TM6SF1-201ENST00000258909 PDHXO00330 501 aa23.37■■□□□ 1.33
TM6SF1-201ENST00000258909 LDHCP07864 332 aa23.37■■□□□ 1.33
TM6SF1-201ENST00000258909 GSTO1P78417 241 aa23.37■■□□□ 1.33
TM6SF1-201ENST00000258909 MOGSQ13724 837 aa23.37■■□□□ 1.33
TM6SF1-201ENST00000258909 PANK1Q8TE04 598 aa23.37■■□□□ 1.33
TM6SF1-201ENST00000258909 GPR108Q9NPR9 543 aa23.37■■□□□ 1.33
TM6SF1-201ENST00000258909 KIAA0100Q14667 2235 aaKnown RBP23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 ANKRD23Q86SG2 305 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 SCYL3Q8IZE3 742 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 PICK1Q9NRD5 415 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 CPA4Q9UI42 421 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 ZHX2Q9Y6X8 837 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 BRCA2P51587 3418 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 POTEFA5A3E0 1075 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 FAM196BA6NMK8 535 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 CCDC158Q5M9N0 1113 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 PTCH2Q9Y6C5 1203 aa23.36■■□□□ 1.33
TM6SF1-201ENST00000258909 MYO5AQ9Y4I1 1855 aaKnown RBP23.35■■□□□ 1.33
TM6SF1-201ENST00000258909 PTPRAP18433 802 aa23.35■■□□□ 1.33
TM6SF1-201ENST00000258909 LACTBP83111 547 aaPredicted RBP23.35■■□□□ 1.33
TM6SF1-201ENST00000258909 MAP3K10Q02779 954 aa23.35■■□□□ 1.33
TM6SF1-201ENST00000258909 ARHGEF6Q15052 776 aa23.35■■□□□ 1.33
TM6SF1-201ENST00000258909 CCDC8Q9H0W5 538 aaPredicted RBP23.35■■□□□ 1.33
TM6SF1-201ENST00000258909 TLR7Q9NYK1 1049 aaKnown RBP23.35■■□□□ 1.33
TM6SF1-201ENST00000258909 NOP58Q9Y2X3 529 aaKnown RBP23.35■■□□□ 1.33
TM6SF1-201ENST00000258909 C17orf99Q6UX52 265 aa23.34■■□□□ 1.33
TM6SF1-201ENST00000258909 CCDC84Q86UT8 332 aaPredicted RBP23.34■■□□□ 1.33
TM6SF1-201ENST00000258909 MKI67P46013 3256 aaKnown RBP23.34■■□□□ 1.33
TM6SF1-201ENST00000258909 CXCL11O14625 94 aa23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 KIF22Q14807 665 aa23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 GPAT2Q6NUI2 795 aa23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 CEP85Q6P2H3 762 aa23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 TEX11Q8IYF3 940 aa23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 SH3RF3Q8TEJ3 882 aaPredicted RBP23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 ARMC5Q96C12 935 aa23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 DBNLQ9UJU6 430 aaKnown RBP23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 DOCK1Q14185 1865 aa23.33■■□□□ 1.33
TM6SF1-201ENST00000258909 CYP2E1P05181 493 aaPredicted RBP23.32■■□□□ 1.32
TM6SF1-201ENST00000258909 NAA16Q6N069 864 aaPredicted RBP23.32■■□□□ 1.32
TM6SF1-201ENST00000258909 AATFQ9NY61 560 aaKnown RBP eCLIP23.32■■□□□ 1.32
TM6SF1-201ENST00000258909 CTNND1O60716 968 aaKnown RBP23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 NPM3O75607 178 aaKnown RBP23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 CYP2C8P10632 490 aa23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 CTGFP29279 349 aa23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 ZAP70P43403 619 aa23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 EAF2Q96CJ1 260 aaPredicted RBP23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 OSBPL5Q9H0X9 879 aaPredicted RBP23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 AFG3L2Q9Y4W6 797 aa23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 PHIPQ8WWQ0 1821 aa23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 ADGRA2Q96PE1 1338 aa23.31■■□□□ 1.32
TM6SF1-201ENST00000258909 MYCP01106 439 aaPredicted RBP23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 SLC9C1Q4G0N8 1177 aa23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 GADL1Q6ZQY3 521 aa23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 ADGRA1Q86SQ6 560 aa23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 NOL10Q9BSC4 688 aaKnown RBP23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 PIH1D3Q9NQM4 214 aaKnown RBP23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 EXOC6BQ9Y2D4 811 aa23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 MAST2Q6P0Q8 1798 aa23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 PTPRFP10586 1907 aa23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 A0A0G2JLL6 359 aaPredicted RBP23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 TRIM75PA6NK02 468 aa23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 PRRT2Q7Z6L0 340 aaPredicted RBP23.3■■□□□ 1.32
TM6SF1-201ENST00000258909 TBC1D12O60347 775 aa23.29■■□□□ 1.32
TM6SF1-201ENST00000258909 MAP4K4O95819 1239 aaPredicted RBP23.29■■□□□ 1.32
TM6SF1-201ENST00000258909 PSMC4P43686 418 aa23.29■■□□□ 1.32
TM6SF1-201ENST00000258909 SH3TC2Q8TF17 1288 aa23.29■■□□□ 1.32
TM6SF1-201ENST00000258909 ZNF333Q96JL9 665 aa23.29■■□□□ 1.32
TM6SF1-201ENST00000258909 ZNF512BQ96KM6 892 aaPredicted RBP23.29■■□□□ 1.32
TM6SF1-201ENST00000258909 NDUFB9Q9Y6M9 179 aa23.29■■□□□ 1.32
TM6SF1-201ENST00000258909 EN2P19622 333 aaPredicted RBP23.28■■□□□ 1.32
TM6SF1-201ENST00000258909 FASTKD5Q7L8L6 764 aaKnown RBP23.28■■□□□ 1.32
TM6SF1-201ENST00000258909 TRIM47Q96LD4 638 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms