RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 AOC3Q16853 763 aa17.92■□□□□ 0.46
HDHD3-201ENST00000238379 CCDC93Q567U6 631 aa17.92■□□□□ 0.46
HDHD3-201ENST00000238379 MXD3Q9BW11 206 aa17.92■□□□□ 0.46
HDHD3-201ENST00000238379 ARPP21Q9UBL0 812 aaPredicted RBP17.92■□□□□ 0.46
HDHD3-201ENST00000238379 ECE2O60344 883 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 STK11IPQ8N1F8 1099 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 WDR33Q9C0J8 1336 aaKnown RBP17.91■□□□□ 0.46
HDHD3-201ENST00000238379 KLF18A0A0U1RQI7 1052 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 PCP11498 1178 aaKnown RBP17.91■□□□□ 0.46
HDHD3-201ENST00000238379 RHBDL3P58872 404 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 EVX2Q03828 476 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 RRP12Q5JTH9 1297 aaKnown RBP17.91■□□□□ 0.46
HDHD3-201ENST00000238379 STRIP1Q5VSL9 837 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 RTKN2Q8IZC4 609 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 SGIP1Q9BQI5 828 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 LLPHQ9BRT6 129 aaKnown RBP17.91■□□□□ 0.46
HDHD3-201ENST00000238379 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 MCM9Q9NXL9 1143 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 DAGLAQ9Y4D2 1042 aa17.91■□□□□ 0.46
HDHD3-201ENST00000238379 STX6O43752 255 aa17.9■□□□□ 0.46
HDHD3-201ENST00000238379 BAG4O95429 457 aaKnown RBP17.9■□□□□ 0.46
HDHD3-201ENST00000238379 CYP2D6P10635 497 aa17.9■□□□□ 0.46
HDHD3-201ENST00000238379 PLCG2P16885 1265 aa17.9■□□□□ 0.46
HDHD3-201ENST00000238379 USP5P45974 858 aa17.9■□□□□ 0.46
HDHD3-201ENST00000238379 FKBP1AP62942 108 aaKnown RBP17.9■□□□□ 0.46
HDHD3-201ENST00000238379 CCT2P78371 535 aaKnown RBP17.9■□□□□ 0.46
HDHD3-201ENST00000238379 MTA3Q9BTC8 594 aa17.9■□□□□ 0.46
HDHD3-201ENST00000238379 NCOA5Q9HCD5 579 aaKnown RBP17.9■□□□□ 0.46
HDHD3-201ENST00000238379 TTF2Q9UNY4 1162 aaKnown RBP17.9■□□□□ 0.46
HDHD3-201ENST00000238379 HPS5Q9UPZ3 1129 aa17.9■□□□□ 0.46
HDHD3-201ENST00000238379 JAK2O60674 1132 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 CTDNEP1O95476 244 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 USP17L8P0C7I0 530 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 LIFRP42702 1097 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 DACT2Q5SW24 774 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 FOXD4L5Q5VV16 416 aaPredicted RBP17.89■□□□□ 0.45
HDHD3-201ENST00000238379 SMARCC2Q8TAQ2 1214 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 TGFBRAP1Q8WUH2 860 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 FOXD4L4Q8WXT5 416 aaPredicted RBP17.89■□□□□ 0.45
HDHD3-201ENST00000238379 ESR2Q92731 530 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 PSMD1Q99460 953 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 LY9Q9HBG7 655 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 SENP2Q9HC62 589 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 NAP1L2Q9ULW6 460 aaPredicted RBP17.89■□□□□ 0.45
HDHD3-201ENST00000238379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDHD3-201ENST00000238379 SCN9AQ15858 1988 aa17.89■□□□□ 0.45
HDHD3-201ENST00000238379 F8W031 263 aaPredicted RBP17.88■□□□□ 0.45
HDHD3-201ENST00000238379 IFIT3O14879 490 aaKnown RBP17.88■□□□□ 0.45
HDHD3-201ENST00000238379 PPIP5K2O43314 1243 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 TMEM67Q5HYA8 995 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 C12orf60Q5U649 245 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 SGMS1Q86VZ5 419 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 NSUN7Q8NE18 718 aaKnown RBP17.88■□□□□ 0.45
HDHD3-201ENST00000238379 PIM2Q9P1W9 311 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 GOLGA8BA8MQT2 603 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 ORC4O43929 436 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 TEX11Q8IYF3 940 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 CHMP4CQ96CF2 233 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 LAMB1P07942 1786 aa17.88■□□□□ 0.45
HDHD3-201ENST00000238379 USP17L3A6NCW0 530 aa17.87■□□□□ 0.45
HDHD3-201ENST00000238379 USP17L4A6NCW7 530 aa17.87■□□□□ 0.45
HDHD3-201ENST00000238379 DDX11L8A8MPP1 907 aa17.87■□□□□ 0.45
HDHD3-201ENST00000238379 ZSCAN22P10073 491 aaPredicted RBP17.87■□□□□ 0.45
HDHD3-201ENST00000238379 PDCP20941 246 aa17.87■□□□□ 0.45
HDHD3-201ENST00000238379 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
HDHD3-201ENST00000238379 APOA5Q6Q788 366 aa17.87■□□□□ 0.45
HDHD3-201ENST00000238379 USP17L1Q7RTZ2 530 aa17.87■□□□□ 0.45
HDHD3-201ENST00000238379 MAPKAPK5Q8IW41 473 aa17.87■□□□□ 0.45
HDHD3-201ENST00000238379 MTMR6Q9Y217 621 aa17.87■□□□□ 0.45
HDHD3-201ENST00000238379 ZNF646O15015 1829 aaPredicted RBP17.87■□□□□ 0.45
HDHD3-201ENST00000238379 SLC3A2P08195 630 aaKnown RBP17.86■□□□□ 0.45
HDHD3-201ENST00000238379 PDIA4P13667 645 aaKnown RBP17.86■□□□□ 0.45
HDHD3-201ENST00000238379 SCNN1DP51172 638 aa17.86■□□□□ 0.45
HDHD3-201ENST00000238379 HHIPL2Q6UWX4 724 aa17.86■□□□□ 0.45
HDHD3-201ENST00000238379 ZKSCAN3Q9BRR0 538 aa17.86■□□□□ 0.45
HDHD3-201ENST00000238379 CDK5RAP2Q96SN8 1893 aa17.86■□□□□ 0.45
HDHD3-201ENST00000238379 PSDA5PKW4 1024 aaPredicted RBP17.86■□□□□ 0.45
HDHD3-201ENST00000238379 YDJCA8MPS7 323 aa17.86■□□□□ 0.45
HDHD3-201ENST00000238379 PRDM1O75626 825 aa17.86■□□□□ 0.45
HDHD3-201ENST00000238379 SART3Q15020 963 aaKnown RBP17.86■□□□□ 0.45
HDHD3-201ENST00000238379 MRIQ9BWK5 157 aa17.86■□□□□ 0.45
HDHD3-201ENST00000238379 ROBO3Q96MS0 1386 aa17.85■□□□□ 0.45
HDHD3-201ENST00000238379 PTPDC1A2A3K4 754 aa17.85■□□□□ 0.45
HDHD3-201ENST00000238379 PTGER2P43116 358 aa17.85■□□□□ 0.45
HDHD3-201ENST00000238379 SEC23AQ15436 765 aa17.85■□□□□ 0.45
HDHD3-201ENST00000238379 SOGA3Q5TF21 947 aa17.85■□□□□ 0.45
HDHD3-201ENST00000238379 RAB11FIP4Q86YS3 637 aa17.85■□□□□ 0.45
HDHD3-201ENST00000238379 FLT1P17948 1338 aa17.85■□□□□ 0.45
HDHD3-201ENST00000238379 DHX16O60231 1041 aaKnown RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 HMGN5P82970 282 aaKnown RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 PDE4BQ07343 736 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 APOBEC3HQ6NTF7 200 aaKnown RBP17.84■□□□□ 0.45
HDHD3-201ENST00000238379 NFXL1Q6ZNB6 911 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 TMTC2Q8N394 836 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 TEKT1Q969V4 418 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 DDX11Q96FC9 970 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 CHAMP1Q96JM3 812 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 UBAC1Q9BSL1 405 aa17.84■□□□□ 0.45
HDHD3-201ENST00000238379 VPS33BQ9H267 617 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms