RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 MECOMQ03112 1051 aa18.51■□□□□ 0.55
UPK3A-201ENST00000216211 ZSCAN29Q8IWY8 852 aaPredicted RBP18.51■□□□□ 0.55
UPK3A-201ENST00000216211 ZNF384Q8TF68 577 aa18.51■□□□□ 0.55
UPK3A-201ENST00000216211 ARHGAP39Q9C0H5 1083 aa18.51■□□□□ 0.55
UPK3A-201ENST00000216211 KCNH4Q9UQ05 1017 aa18.51■□□□□ 0.55
UPK3A-201ENST00000216211 PTCH2Q9Y6C5 1203 aa18.51■□□□□ 0.55
UPK3A-201ENST00000216211 MGAMO43451 1857 aa18.51■□□□□ 0.55
UPK3A-201ENST00000216211 ATAD5Q96QE3 1844 aa18.51■□□□□ 0.55
UPK3A-201ENST00000216211 DDTLA6NHG4 134 aaPredicted RBP18.5■□□□□ 0.55
UPK3A-201ENST00000216211 SLURP2P0DP57 97 aa18.5■□□□□ 0.55
UPK3A-201ENST00000216211 ARHGEF6Q15052 776 aa18.5■□□□□ 0.55
UPK3A-201ENST00000216211 TBC1D9Q6ZT07 1266 aa18.5■□□□□ 0.55
UPK3A-201ENST00000216211 ANKRD23Q86SG2 305 aa18.5■□□□□ 0.55
UPK3A-201ENST00000216211 SPATA5Q8NB90 893 aa18.5■□□□□ 0.55
UPK3A-201ENST00000216211 ARMC5Q96C12 935 aa18.5■□□□□ 0.55
UPK3A-201ENST00000216211 MAST2Q6P0Q8 1798 aa18.5■□□□□ 0.55
UPK3A-201ENST00000216211 CDK5RAP2Q96SN8 1893 aa18.5■□□□□ 0.55
UPK3A-201ENST00000216211 PHF20L1A8MW92 1017 aa18.49■□□□□ 0.55
UPK3A-201ENST00000216211 PDHXO00330 501 aa18.49■□□□□ 0.55
UPK3A-201ENST00000216211 ECM2O94769 699 aaPredicted RBP18.49■□□□□ 0.55
UPK3A-201ENST00000216211 ARID4AP29374 1257 aaPredicted RBP18.49■□□□□ 0.55
UPK3A-201ENST00000216211 LACTBP83111 547 aaPredicted RBP18.49■□□□□ 0.55
UPK3A-201ENST00000216211 MOGSQ13724 837 aa18.49■□□□□ 0.55
UPK3A-201ENST00000216211 KIF22Q14807 665 aa18.49■□□□□ 0.55
UPK3A-201ENST00000216211 CPA4Q9UI42 421 aa18.49■□□□□ 0.55
UPK3A-201ENST00000216211 KIAA0100Q14667 2235 aaKnown RBP18.49■□□□□ 0.55
UPK3A-201ENST00000216211 MKI67P46013 3256 aaKnown RBP18.48■□□□□ 0.55
UPK3A-201ENST00000216211 GPR75-ASB3A0A0A6YYF3 556 aa18.48■□□□□ 0.55
UPK3A-201ENST00000216211 MCAMP43121 646 aa18.48■□□□□ 0.55
UPK3A-201ENST00000216211 RHBDL3P58872 404 aa18.48■□□□□ 0.55
UPK3A-201ENST00000216211 PRPF38BQ5VTL8 546 aaKnown RBP18.48■□□□□ 0.55
UPK3A-201ENST00000216211 SCYL3Q8IZE3 742 aa18.48■□□□□ 0.55
UPK3A-201ENST00000216211 NSUN4Q96CB9 384 aaKnown RBP18.48■□□□□ 0.55
UPK3A-201ENST00000216211 C1orf115Q9H7X2 142 aa18.48■□□□□ 0.55
UPK3A-201ENST00000216211 SLC34A2O95436 690 aa18.47■□□□□ 0.55
UPK3A-201ENST00000216211 POLA2Q14181 598 aa18.47■□□□□ 0.55
UPK3A-201ENST00000216211 SLC9C1Q4G0N8 1177 aa18.47■□□□□ 0.55
UPK3A-201ENST00000216211 C17orf99Q6UX52 265 aa18.47■□□□□ 0.55
UPK3A-201ENST00000216211 ZNF333Q96JL9 665 aa18.47■□□□□ 0.55
UPK3A-201ENST00000216211 RAI14Q9P0K7 980 aa18.47■□□□□ 0.55
UPK3A-201ENST00000216211 FOCADQ5VW36 1801 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 CXCL11O14625 94 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 LDHCP07864 332 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 PTPRAP18433 802 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 GSTO1P78417 241 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 MAP3K10Q02779 954 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 FTSJ3Q8IY81 847 aaKnown RBP18.46■□□□□ 0.55
UPK3A-201ENST00000216211 SSH3Q8TE77 659 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 PICK1Q9NRD5 415 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 ZHX2Q9Y6X8 837 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 ADGRA2Q96PE1 1338 aa18.46■□□□□ 0.55
UPK3A-201ENST00000216211 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
UPK3A-201ENST00000216211 EN2P19622 333 aaPredicted RBP18.45■□□□□ 0.54
UPK3A-201ENST00000216211 CTGFP29279 349 aa18.45■□□□□ 0.54
UPK3A-201ENST00000216211 OS9Q13438 667 aaPredicted RBP18.45■□□□□ 0.54
UPK3A-201ENST00000216211 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
UPK3A-201ENST00000216211 GPAT2Q6NUI2 795 aa18.45■□□□□ 0.54
UPK3A-201ENST00000216211 NBPF11Q86T75 865 aa18.45■□□□□ 0.54
UPK3A-201ENST00000216211 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
UPK3A-201ENST00000216211 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.45■□□□□ 0.54
UPK3A-201ENST00000216211 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
UPK3A-201ENST00000216211 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 MYCP01106 439 aaPredicted RBP18.44■□□□□ 0.54
UPK3A-201ENST00000216211 RLBP1P12271 317 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 TTC39AQ5SRH9 613 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 ITPRIPQ8IWB1 547 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 SH3TC2Q8TF17 1288 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 DBNDD2Q9BQY9 259 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 TMEM106CQ9BVX2 250 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 GPR108Q9NPR9 543 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 LRP2BPQ9P2M1 347 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 AFG3L2Q9Y4W6 797 aa18.44■□□□□ 0.54
UPK3A-201ENST00000216211 A0A0G2JLL6 359 aaPredicted RBP18.43■□□□□ 0.54
UPK3A-201ENST00000216211 FAM196BA6NMK8 535 aa18.43■□□□□ 0.54
UPK3A-201ENST00000216211 CTNND1O60716 968 aaKnown RBP18.43■□□□□ 0.54
UPK3A-201ENST00000216211 SURF6O75683 361 aaKnown RBP18.43■□□□□ 0.54
UPK3A-201ENST00000216211 GNRH1P01148 92 aa18.43■□□□□ 0.54
UPK3A-201ENST00000216211 CYP2C8P10632 490 aa18.43■□□□□ 0.54
UPK3A-201ENST00000216211 PSMC4P43686 418 aa18.43■□□□□ 0.54
UPK3A-201ENST00000216211 GADL1Q6ZQY3 521 aa18.43■□□□□ 0.54
UPK3A-201ENST00000216211 PRRT2Q7Z6L0 340 aaPredicted RBP18.43■□□□□ 0.54
UPK3A-201ENST00000216211 CCDC84Q86UT8 332 aaPredicted RBP18.43■□□□□ 0.54
UPK3A-201ENST00000216211 COL2A1P02458 1487 aaPredicted RBP18.42■□□□□ 0.54
UPK3A-201ENST00000216211 ZBTB7BO15156 539 aaPredicted RBP18.42■□□□□ 0.54
UPK3A-201ENST00000216211 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
UPK3A-201ENST00000216211 CCDC158Q5M9N0 1113 aa18.42■□□□□ 0.54
UPK3A-201ENST00000216211 FASTKD5Q7L8L6 764 aaKnown RBP18.42■□□□□ 0.54
UPK3A-201ENST00000216211 TEX11Q8IYF3 940 aa18.42■□□□□ 0.54
UPK3A-201ENST00000216211 TRIM47Q96LD4 638 aa18.42■□□□□ 0.54
UPK3A-201ENST00000216211 PARK7Q99497 189 aaKnown RBP18.42■□□□□ 0.54
UPK3A-201ENST00000216211 OSBPL5Q9H0X9 879 aaPredicted RBP18.42■□□□□ 0.54
UPK3A-201ENST00000216211 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.42■□□□□ 0.54
UPK3A-201ENST00000216211 LOC285556D6RIA3 1793 aa18.42■□□□□ 0.54
UPK3A-201ENST00000216211 TBC1D12O60347 775 aa18.41■□□□□ 0.54
UPK3A-201ENST00000216211 FMNL1O95466 1100 aaPredicted RBP18.41■□□□□ 0.54
UPK3A-201ENST00000216211 MAP4K4O95819 1239 aaPredicted RBP18.41■□□□□ 0.54
UPK3A-201ENST00000216211 PRMT2P55345 433 aa18.41■□□□□ 0.54
UPK3A-201ENST00000216211 SLC4A8Q2Y0W8 1093 aa18.41■□□□□ 0.54
UPK3A-201ENST00000216211 SH3RF3Q8TEJ3 882 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms