RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Speer4dL7N216 212 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Cd3dP04235 173 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Tbx2Q60707 711 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Cyp7b1Q60991 507 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Olfr119Q7TRJ5 321 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Clec16aQ80U30 1036 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Tspyl4Q8VD63 406 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 GmnnO88513 206 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Snrpa1P57784 255 aaKnown RBP13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Fam170aQ66LM6 333 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ccdc150Q8CDI7 1110 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 4930548H24RikQ9D496 437 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Brwd3A2AHJ4 1799 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Zbtb21E9Q444 1094 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ampd3O08739 766 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Kcnj14Q8JZN3 434 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Mrps25Q9D125 171 aaKnown RBP13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Etnk1Q9D4V0 363 aa13.33□□□□□ -0.28
Trim11-202ENSMUST00000108809 Nhsl1Q8CAF4 1587 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Q3TYL0 343 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Washc4Q3UMB9 1173 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Jmjd4Q8BFT6 427 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Susd4Q8BH32 490 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Trim11Q99PQ2 467 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Tubb4aQ9D6F9 444 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 MpndQ3TV65 487 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Rtn1Q8K0T0 780 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Wasf1Q8R5H6 559 aa13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Nup98Q6PFD9 1816 aaKnown RBP13.32□□□□□ -0.28
Trim11-202ENSMUST00000108809 Dnajc25A2ALW5 357 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Gm5624F6ZZG8 207 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 H2afxP27661 143 aaKnown RBP13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Pram1Q6BCL1 675 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Luc7l2Q7TNC4 392 aaKnown RBP13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Tubgcp2Q921G8 905 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Pold4Q9CWP8 107 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Acad12D3Z7X0 555 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Etf1Q8BWY3 437 aaKnown RBP13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ufl1Q8CCJ3 793 aaKnown RBP13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Evc2Q8K1G2 1220 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Myo1aO88329 1043 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Tdo2P48776 406 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Gnat2P50149 354 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Siah1aP61092 282 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Sik1Q60670 779 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Agtpbp1Q641K1 1218 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ctdspl2Q8BG15 465 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Slfnl1Q8BHW9 410 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Terb1Q8C0V1 768 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Hic2Q9JLZ6 619 aaKnown RBP13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Dock5B2RY04 1868 aa13.31□□□□□ -0.28
Trim11-202ENSMUST00000108809 Paxbp1P58501 919 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Znf653Q6YND2 615 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Bap1Q99PU7 728 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Stk39Q9Z1W9 556 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Myh7bA2AQP0 1941 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ecm29Q6PDI5 1840 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Kat6bQ8BRB7 1872 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Rbbp6P97868 1790 aaKnown RBP13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Slc4a4O88343 1079 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Sec23aQ01405 765 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ric8aQ3TIR3 530 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Stac3Q8BZ71 360 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ulbp1Q8HWA3 334 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 WtapQ9ER69 396 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Zbtb7aO88939 569 aaKnown RBP13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 SsbP32067 415 aaKnown RBP13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Dpf2Q61103 391 aaKnown RBP13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Krt39Q6IFX4 482 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Abcb6Q9DC29 842 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Rapgef4Q9EQZ6 1011 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Myh13B1AR69 1938 aa13.3□□□□□ -0.28
Trim11-202ENSMUST00000108809 Pla2g4bP0C871 782 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Fam89aQ14BJ1 175 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 GabrdP22933 449 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Olfm5Q8BU90 496 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Fam53cQ8BXQ8 393 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Polr2dQ9D7M8 142 aaKnown RBP13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Diaph1O08808 1255 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Pde11aP0C1Q2 933 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Usp49Q6P9L4 685 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Enox1Q8BHR2 643 aaKnown RBP13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ccdc39Q9D5Y1 937 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Cbx6Q9DBY5 414 aa13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ktn1Q61595 1327 aaKnown RBP13.29□□□□□ -0.28
Trim11-202ENSMUST00000108809 Tbc1d8bA3KGB4 1114 aa13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 CrcpO35427 148 aa13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Nek1P51954 1203 aa13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Esco1Q69Z69 843 aa13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Klhl30Q8C3F7 581 aa13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 HdlbpQ8VDJ3 1268 aaKnown RBP13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Arl8aQ8VEH3 186 aa13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Dnajc2P54103 621 aaKnown RBP13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Znf496Q5SXI5 585 aa13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ankk1Q8BZ25 745 aa13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Brd3Q8K2F0 726 aaKnown RBP13.28□□□□□ -0.28
Trim11-202ENSMUST00000108809 Slc27a1Q60714 646 aa13.27□□□□□ -0.28
Trim11-202ENSMUST00000108809 Myh15E9Q264 1925 aa13.27□□□□□ -0.28
Trim11-202ENSMUST00000108809 Dennd3A2RT67 1274 aa13.27□□□□□ -0.28
Trim11-202ENSMUST00000108809 Ift122Q6NWV3 1182 aa13.27□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms