RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Haus7Q8BKT8 364 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 9230110C19RikQ8CC70 267 aa18.88■□□□□ 0.61
Shh-201ENSMUST00000002708 Naaladl2A0A0N4SUJ3 795 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Atp8b5A3FIN4 1183 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Mcm6P97311 821 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Ifit1bl2Q3U687 466 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Kmt5bQ3U8K7 883 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Q66JV7 365 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Abtb2Q7TQI7 1024 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Ube3cQ80U95 1083 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Ccdc102aQ3TMW1 549 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Ankrd23Q812A3 306 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Tmem143Q8VD26 458 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Ginm1Q91WR6 327 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Casp12O08736 419 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 H2afxP27661 143 aaKnown RBP18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Vgll3P85442 326 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Ccdc174Q3U155 467 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Nme8Q715T0 586 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Filip1Q9CS72 1211 aa18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Rbm33Q9CXK9 1231 aaKnown RBP18.87■□□□□ 0.61
Shh-201ENSMUST00000002708 Myh6Q02566 1938 aaKnown RBP18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Uri1Q3TLD5 531 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Mkrn3Q60764 544 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Ctdspl2Q8BG15 465 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Etf1Q8BWY3 437 aaKnown RBP18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Fam53cQ8BXQ8 393 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Pold4Q9CWP8 107 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Ccdc47Q9D024 483 aaKnown RBP18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Suclg2Q9Z2I8 433 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Ess2O70279 479 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Cdkl5Q3UTQ8 938 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Krt39Q6IFX4 482 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Spata32Q8C5V0 334 aa18.86■□□□□ 0.61
Shh-201ENSMUST00000002708 Slc4a4O88343 1079 aa18.85■□□□□ 0.61
Shh-201ENSMUST00000002708 Cplx2P84086 134 aa18.85■□□□□ 0.61
Shh-201ENSMUST00000002708 Trip6Q9Z1Y4 480 aa18.85■□□□□ 0.61
Shh-201ENSMUST00000002708 Kcnd1Q03719 651 aa18.85■□□□□ 0.61
Shh-201ENSMUST00000002708 Spag5Q7TME2 1165 aa18.85■□□□□ 0.61
Shh-201ENSMUST00000002708 Kcnj14Q8JZN3 434 aa18.85■□□□□ 0.61
Shh-201ENSMUST00000002708 Sirt2Q8VDQ8 389 aa18.85■□□□□ 0.61
Shh-201ENSMUST00000002708 Jakmip2D3YXK0 820 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 GmnnO88513 206 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Tubgcp2Q921G8 905 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Desi2Q9D291 194 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Fbxo3Q9DC63 480 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 FliiQ9JJ28 1271 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Dapk3O54784 448 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Rtel1Q0VGM9 1203 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Znf496Q5SXI5 585 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Znf526Q8BI66 675 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Lama4P97927 1816 aa18.84■□□□□ 0.61
Shh-201ENSMUST00000002708 Kat6bQ8BRB7 1872 aa18.83■□□□□ 0.61
Shh-201ENSMUST00000002708 NgdnQ9DB96 315 aaKnown RBP18.83■□□□□ 0.61
Shh-201ENSMUST00000002708 Ddb1Q3U1J4 1140 aaKnown RBP18.83■□□□□ 0.6
Shh-201ENSMUST00000002708 Glis3Q6XP49 780 aa18.83■□□□□ 0.6
Shh-201ENSMUST00000002708 Slc39a11Q8BWY7 342 aa18.83■□□□□ 0.6
Shh-201ENSMUST00000002708 BccipQ9CWI3 316 aa18.83■□□□□ 0.6
Shh-201ENSMUST00000002708 ChmQ9QXG2 665 aa18.83■□□□□ 0.6
Shh-201ENSMUST00000002708 Mapk8ip1Q9WVI9 707 aa18.83■□□□□ 0.6
Shh-201ENSMUST00000002708 Tnni2P13412 182 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Ankrd40Q5SUE8 363 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Efcc1Q9JJF6 558 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Frmd7A2AD83 703 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Usp49Q6P9L4 685 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Trak2Q6P9N8 913 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Klhl30Q8C3F7 581 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Nek9Q8K1R7 984 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Ybx3Q9JKB3 361 aaKnown RBP18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Kcnh3Q9WVJ0 1095 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Bicdl1A0JNT9 577 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Arhgef16Q3U5C8 713 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Vps37dQ810I0 261 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Clic6Q8BHB9 596 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Q8CEZ4 452 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 Etnk1Q9D4V0 363 aa18.82■□□□□ 0.6
Shh-201ENSMUST00000002708 AfdnQ9QZQ1 1820 aaKnown RBP18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Gm5624F6ZZG8 207 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 GabrdP22933 449 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Casp1P29452 402 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Ovgp1Q62010 721 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Bsdc1Q80Y55 427 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Klc3Q91W40 508 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Gpr108Q91WD0 569 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 BaatQ91X34 420 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Ankrd1Q9CR42 319 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Slc44a1Q6X893 653 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Slitrk3Q810B9 980 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Necab1Q8BG18 352 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Zmynd15Q8C0R7 736 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Fam76aQ922G2 307 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 CpvlQ9D3S9 478 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Wdr64Q9D565 1086 aa18.81■□□□□ 0.6
Shh-201ENSMUST00000002708 Ces1hD3Z298 562 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Foxp1P58462 705 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 NenfQ9CQ45 171 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Psrc1Q9D0P7 329 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Bcl2l12Q9D3J3 255 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Lonp2Q9DBN5 852 aa18.8■□□□□ 0.6
Shh-201ENSMUST00000002708 Tulp1Q9Z273 543 aa18.8■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms