RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ASTLQ6HA08 431 aaPredicted RBP9.51□□□□□ -0.89
ATM-230ENST00000640388 VASPP50552 380 aaPredicted RBP9.5□□□□□ -0.89
ATM-230ENST00000640388 PLCD3Q8N3E9 789 aa9.5□□□□□ -0.89
ATM-230ENST00000640388 TSPYL2Q9H2G4 693 aaPredicted RBP9.48□□□□□ -0.89
ATM-230ENST00000640388 KIF12Q96FN5 646 aa9.46□□□□□ -0.9
ATM-230ENST00000640388 ATMINO43313 823 aaPredicted RBP9.45□□□□□ -0.9
ATM-230ENST00000640388 PELP1Q8IZL8 1130 aaKnown RBP9.45□□□□□ -0.9
ATM-230ENST00000640388 RASEFQ8IZ41 740 aa9.43□□□□□ -0.9
ATM-230ENST00000640388 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
ATM-230ENST00000640388 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
ATM-230ENST00000640388 SLC39A7Q92504 469 aa9.42□□□□□ -0.9
ATM-230ENST00000640388 C7P10643 843 aa9.41□□□□□ -0.9
ATM-230ENST00000640388 OTUD5Q96G74 571 aa9.4□□□□□ -0.9
ATM-230ENST00000640388 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
ATM-230ENST00000640388 KLHL34Q8N239 644 aa9.39□□□□□ -0.91
ATM-230ENST00000640388 METRNQ9UJH8 293 aa9.39□□□□□ -0.91
ATM-230ENST00000640388 TIE1P35590 1138 aa9.38□□□□□ -0.91
ATM-230ENST00000640388 NUBP1P53384 320 aa9.38□□□□□ -0.91
ATM-230ENST00000640388 SGIP1Q9BQI5 828 aa9.38□□□□□ -0.91
ATM-230ENST00000640388 MAP3K13O43283 966 aa9.36□□□□□ -0.91
ATM-230ENST00000640388 ATN1P54259 1190 aaPredicted RBP9.35□□□□□ -0.91
ATM-230ENST00000640388 BMP2KQ9NSY1 1161 aaPredicted RBP9.35□□□□□ -0.91
ATM-230ENST00000640388 TRPC6Q9Y210 931 aa9.33□□□□□ -0.92
ATM-230ENST00000640388 POTEJP0CG39 1038 aa9.3□□□□□ -0.92
ATM-230ENST00000640388 FAM212AQ96EL1 285 aa9.3□□□□□ -0.92
ATM-230ENST00000640388 MAMSTRQ6ZN01 415 aa9.29□□□□□ -0.92
ATM-230ENST00000640388 TTLL13PA6NNM8 815 aa9.28□□□□□ -0.92
ATM-230ENST00000640388 POTEFA5A3E0 1075 aa9.27□□□□□ -0.93
ATM-230ENST00000640388 SPOCK2Q92563 424 aa9.27□□□□□ -0.93
ATM-230ENST00000640388 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
ATM-230ENST00000640388 IER5LQ5T953 404 aa9.25□□□□□ -0.93
ATM-230ENST00000640388 IFNL1Q8IU54 200 aa9.22□□□□□ -0.93
ATM-230ENST00000640388 SCUBE2Q9NQ36 999 aa9.22□□□□□ -0.93
ATM-230ENST00000640388 TRIM35Q9UPQ4 493 aa9.2□□□□□ -0.94
ATM-230ENST00000640388 DCAF8Q5TAQ9 597 aa9.19□□□□□ -0.94
ATM-230ENST00000640388 COLQQ9Y215 455 aaPredicted RBP9.18□□□□□ -0.94
ATM-230ENST00000640388 CIZ1Q9ULV3 898 aaPredicted RBP9.17□□□□□ -0.94
ATM-230ENST00000640388 TMEM106CQ9BVX2 250 aa9.15□□□□□ -0.94
ATM-230ENST00000640388 POTEMA6NI47 508 aa9.14□□□□□ -0.95
ATM-230ENST00000640388 SEC24BO95487 1268 aa9.14□□□□□ -0.95
ATM-230ENST00000640388 GSE1Q14687 1217 aa9.14□□□□□ -0.95
ATM-230ENST00000640388 PYGBP11216 843 aa9.11□□□□□ -0.95
ATM-230ENST00000640388 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
ATM-230ENST00000640388 POTEGQ6S5H5 508 aa9.11□□□□□ -0.95
ATM-230ENST00000640388 IRX5P78411 483 aaPredicted RBP9.1□□□□□ -0.95
ATM-230ENST00000640388 CHRM1P11229 460 aaPredicted RBP9.09□□□□□ -0.95
ATM-230ENST00000640388 PCDH10Q9P2E7 1040 aa9.09□□□□□ -0.95
ATM-230ENST00000640388 ZNF467Q7Z7K2 595 aaPredicted RBP9.07□□□□□ -0.96
ATM-230ENST00000640388 PLCG2P16885 1265 aa9.06□□□□□ -0.96
ATM-230ENST00000640388 PKD2Q13563 968 aa9.05□□□□□ -0.96
ATM-230ENST00000640388 AMER1Q5JTC6 1135 aaPredicted RBP9.05□□□□□ -0.96
ATM-230ENST00000640388 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
ATM-230ENST00000640388 OCEL1Q9H607 264 aa9.04□□□□□ -0.96
ATM-230ENST00000640388 RTN4Q9NQC3 1192 aaKnown RBP9.04□□□□□ -0.96
ATM-230ENST00000640388 ECM2O94769 699 aaPredicted RBP9.02□□□□□ -0.97
ATM-230ENST00000640388 TRIM41Q8WV44 630 aa9.01□□□□□ -0.97
ATM-230ENST00000640388 FAM163AQ96GL9 167 aaPredicted RBP9.01□□□□□ -0.97
ATM-230ENST00000640388 SLAIN1Q8ND83 568 aa8.98□□□□□ -0.97
ATM-230ENST00000640388 PDCD7Q8N8D1 485 aaKnown RBP8.97□□□□□ -0.97
ATM-230ENST00000640388 PSEN1P49768 467 aa8.95□□□□□ -0.98
ATM-230ENST00000640388 ILDR1Q86SU0 546 aaPredicted RBP8.95□□□□□ -0.98
ATM-230ENST00000640388 RGL2O15211 777 aa8.93□□□□□ -0.98
ATM-230ENST00000640388 PDAP1Q13442 181 aaKnown RBP8.93□□□□□ -0.98
ATM-230ENST00000640388 MKRN3Q13064 507 aaKnown RBP8.92□□□□□ -0.98
ATM-230ENST00000640388 GOLGA2Q08379 1002 aa8.91□□□□□ -0.98
ATM-230ENST00000640388 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
ATM-230ENST00000640388 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.91□□□□□ -0.98
ATM-230ENST00000640388 L3MBTL3Q96JM7 780 aaPredicted RBP8.9□□□□□ -0.98
ATM-230ENST00000640388 RIOK3O14730 519 aaKnown RBP8.89□□□□□ -0.99
ATM-230ENST00000640388 ST18O60284 1047 aa8.89□□□□□ -0.99
ATM-230ENST00000640388 SNPHO15079 494 aa8.88□□□□□ -0.99
ATM-230ENST00000640388 TMEM121BQ9BXQ6 578 aaPredicted RBP8.88□□□□□ -0.99
ATM-230ENST00000640388 DCAF8L2P0C7V8 631 aa8.86□□□□□ -0.99
ATM-230ENST00000640388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.86□□□□□ -0.996e-8■■■■□ 22.7
ATM-230ENST00000640388 VGFO15240 615 aaPredicted RBP8.84□□□□□ -0.99
ATM-230ENST00000640388 C3orf67Q6ZVT6 689 aa8.84□□□□□ -0.99
ATM-230ENST00000640388 CDAN1Q8IWY9 1227 aa8.83□□□□□ -1
ATM-230ENST00000640388 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
ATM-230ENST00000640388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.81□□□□□ -1
ATM-230ENST00000640388 ZFP91Q96JP5 570 aaPredicted RBP8.81□□□□□ -1
ATM-230ENST00000640388 CABP2Q9NPB3 220 aa8.81□□□□□ -1
ATM-230ENST00000640388 STK25O00506 426 aa8.77□□□□□ -1.01
ATM-230ENST00000640388 CHGAP10645 457 aaKnown RBP8.76□□□□□ -1.01
ATM-230ENST00000640388 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
ATM-230ENST00000640388 BOLA1Q9Y3E2 137 aa8.76□□□□□ -1.01
ATM-230ENST00000640388 DPY19L2Q6NUT2 758 aa8.75□□□□□ -1.01
ATM-230ENST00000640388 STK24Q9Y6E0 443 aa8.75□□□□□ -1.01
ATM-230ENST00000640388 G3V3G9 751 aa8.71□□□□□ -1.02
ATM-230ENST00000640388 HS6ST3Q8IZP7 471 aa8.71□□□□□ -1.02
ATM-230ENST00000640388 EFCAB3Q8N7B9 438 aa8.71□□□□□ -1.02
ATM-230ENST00000640388 SOX12O15370 315 aa8.69□□□□□ -1.02
ATM-230ENST00000640388 MARVELD3Q96A59 401 aa8.69□□□□□ -1.02
ATM-230ENST00000640388 HOXB3P14651 431 aaPredicted RBP8.68□□□□□ -1.02
ATM-230ENST00000640388 EMP3P54852 163 aa8.67□□□□□ -1.02
ATM-230ENST00000640388 MICALL2Q8IY33 904 aa8.64□□□□□ -1.03
ATM-230ENST00000640388 SPNS2Q8IVW8 549 aa8.63□□□□□ -1.03
ATM-230ENST00000640388 MS4A4AQ96JQ5 239 aa8.63□□□□□ -1.03
ATM-230ENST00000640388 HOXB1P14653 301 aaPredicted RBP8.62□□□□□ -1.03
ATM-230ENST00000640388 DOK7Q18PE1 504 aa8.62□□□□□ -1.03
ATM-230ENST00000640388 HS3ST6Q96QI5 342 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms