RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 MS4A3Q96HJ5 214 aa7.83□□□□□ -1.16
GYPB-216ENST00000638448 ZBTB47Q9UFB7 747 aaPredicted RBP7.83□□□□□ -1.16
GYPB-216ENST00000638448 NUBP1P53384 320 aa7.81□□□□□ -1.16
GYPB-216ENST00000638448 VASPP50552 380 aaPredicted RBP7.8□□□□□ -1.16
GYPB-216ENST00000638448 LHX8Q68G74 356 aa7.8□□□□□ -1.16
GYPB-216ENST00000638448 KIF12Q96FN5 646 aa7.78□□□□□ -1.16
GYPB-216ENST00000638448 MAP3K13O43283 966 aa7.75□□□□□ -1.17
GYPB-216ENST00000638448 FAM212AQ96EL1 285 aa7.75□□□□□ -1.17
GYPB-216ENST00000638448 PELP1Q8IZL8 1130 aaKnown RBP7.73□□□□□ -1.17
GYPB-216ENST00000638448 TRPC6Q9Y210 931 aa7.73□□□□□ -1.17
GYPB-216ENST00000638448 ASTLQ6HA08 431 aaPredicted RBP7.72□□□□□ -1.17
GYPB-216ENST00000638448 ATMINO43313 823 aaPredicted RBP7.71□□□□□ -1.18
GYPB-216ENST00000638448 KLHL34Q8N239 644 aa7.7□□□□□ -1.18
GYPB-216ENST00000638448 BMP2KQ9NSY1 1161 aaPredicted RBP7.69□□□□□ -1.18
GYPB-216ENST00000638448 PCDHB13Q9Y5F0 798 aa7.68□□□□□ -1.18
GYPB-216ENST00000638448 ATN1P54259 1190 aaPredicted RBP7.67□□□□□ -1.18
GYPB-216ENST00000638448 DCAF8Q5TAQ9 597 aa7.67□□□□□ -1.18
GYPB-216ENST00000638448 IFNLR1Q8IU57 520 aaPredicted RBP7.66□□□□□ -1.18
GYPB-216ENST00000638448 METRNQ9UJH8 293 aa7.66□□□□□ -1.18
GYPB-216ENST00000638448 PYGBP11216 843 aa7.65□□□□□ -1.18
GYPB-216ENST00000638448 TIE1P35590 1138 aa7.65□□□□□ -1.18
GYPB-216ENST00000638448 IFNL1Q8IU54 200 aa7.65□□□□□ -1.18
GYPB-216ENST00000638448 SGIP1Q9BQI5 828 aa7.65□□□□□ -1.18
GYPB-216ENST00000638448 TTLL13PA6NNM8 815 aa7.64□□□□□ -1.19
GYPB-216ENST00000638448 POTEB2H3BUK9 544 aa7.64□□□□□ -1.19
GYPB-216ENST00000638448 SLC39A7Q92504 469 aa7.64□□□□□ -1.19
GYPB-216ENST00000638448 C7P10643 843 aa7.62□□□□□ -1.19
GYPB-216ENST00000638448 AMER1Q5JTC6 1135 aaPredicted RBP7.62□□□□□ -1.19
GYPB-216ENST00000638448 GSE1Q14687 1217 aa7.61□□□□□ -1.19
GYPB-216ENST00000638448 SPOCK2Q92563 424 aa7.6□□□□□ -1.19
GYPB-216ENST00000638448 TMEM106CQ9BVX2 250 aa7.58□□□□□ -1.2
GYPB-216ENST00000638448 PCDHB8Q9UN66 801 aa7.58□□□□□ -1.2
GYPB-216ENST00000638448 TRIM35Q9UPQ4 493 aa7.58□□□□□ -1.2
GYPB-216ENST00000638448 POTEFA5A3E0 1075 aa7.57□□□□□ -1.2
GYPB-216ENST00000638448 OTUD5Q96G74 571 aa7.57□□□□□ -1.2
GYPB-216ENST00000638448 POTEJP0CG39 1038 aa7.56□□□□□ -1.2
GYPB-216ENST00000638448 CIZ1Q9ULV3 898 aaPredicted RBP7.55□□□□□ -1.2
GYPB-216ENST00000638448 COLQQ9Y215 455 aaPredicted RBP7.54□□□□□ -1.2
GYPB-216ENST00000638448 CHRM1P11229 460 aaPredicted RBP7.52□□□□□ -1.21
GYPB-216ENST00000638448 IER5LQ5T953 404 aa7.52□□□□□ -1.21
GYPB-216ENST00000638448 ZNF467Q7Z7K2 595 aaPredicted RBP7.52□□□□□ -1.21
GYPB-216ENST00000638448 SEC24BO95487 1268 aa7.51□□□□□ -1.21
GYPB-216ENST00000638448 RTN4Q9NQC3 1192 aaKnown RBP7.5□□□□□ -1.21
GYPB-216ENST00000638448 MAMSTRQ6ZN01 415 aa7.47□□□□□ -1.21
GYPB-216ENST00000638448 PLCG2P16885 1265 aa7.46□□□□□ -1.22
GYPB-216ENST00000638448 PSEN1P49768 467 aa7.46□□□□□ -1.22
GYPB-216ENST00000638448 IRX5P78411 483 aaPredicted RBP7.46□□□□□ -1.22
GYPB-216ENST00000638448 SCUBE2Q9NQ36 999 aa7.46□□□□□ -1.22
GYPB-216ENST00000638448 PDAP1Q13442 181 aaKnown RBP7.44□□□□□ -1.22
GYPB-216ENST00000638448 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
GYPB-216ENST00000638448 TRIM41Q8WV44 630 aa7.43□□□□□ -1.22
GYPB-216ENST00000638448 GOLGA2Q08379 1002 aa7.41□□□□□ -1.22
GYPB-216ENST00000638448 OCEL1Q9H607 264 aa7.41□□□□□ -1.22
GYPB-216ENST00000638448 MKRN3Q13064 507 aaKnown RBP7.39□□□□□ -1.23
GYPB-216ENST00000638448 PDCD7Q8N8D1 485 aaKnown RBP7.39□□□□□ -1.23
GYPB-216ENST00000638448 RNF25Q96BH1 459 aaPredicted RBP7.39□□□□□ -1.23
GYPB-216ENST00000638448 CABP2Q9NPB3 220 aa7.38□□□□□ -1.23
GYPB-216ENST00000638448 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.36□□□□□ -1.23
GYPB-216ENST00000638448 RIOK3O14730 519 aaKnown RBP7.35□□□□□ -1.23
GYPB-216ENST00000638448 LCE2DQ5TA82 110 aaPredicted RBP7.34□□□□□ -1.23
GYPB-216ENST00000638448 SLAIN1Q8ND83 568 aa7.34□□□□□ -1.23
GYPB-216ENST00000638448 ILDR1Q86SU0 546 aaPredicted RBP7.33□□□□□ -1.24
GYPB-216ENST00000638448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.32□□□□□ -1.24
GYPB-216ENST00000638448 POTEMA6NI47 508 aa7.32□□□□□ -1.24
GYPB-216ENST00000638448 ZFP91Q96JP5 570 aaPredicted RBP7.32□□□□□ -1.24
GYPB-216ENST00000638448 VGFO15240 615 aaPredicted RBP7.31□□□□□ -1.24
GYPB-216ENST00000638448 FAM163AQ96GL9 167 aaPredicted RBP7.31□□□□□ -1.24
GYPB-216ENST00000638448 DPY19L2Q6NUT2 758 aa7.3□□□□□ -1.24
GYPB-216ENST00000638448 POTEGQ6S5H5 508 aa7.3□□□□□ -1.24
GYPB-216ENST00000638448 EFCAB3Q8N7B9 438 aa7.3□□□□□ -1.24
GYPB-216ENST00000638448 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
GYPB-216ENST00000638448 C3orf67Q6ZVT6 689 aa7.29□□□□□ -1.24
GYPB-216ENST00000638448 L3MBTL3Q96JM7 780 aaPredicted RBP7.29□□□□□ -1.24
GYPB-216ENST00000638448 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
GYPB-216ENST00000638448 ECM2O94769 699 aaPredicted RBP7.28□□□□□ -1.24
GYPB-216ENST00000638448 PKD2Q13563 968 aa7.28□□□□□ -1.24
GYPB-216ENST00000638448 BOLA1Q9Y3E2 137 aa7.25□□□□□ -1.25
GYPB-216ENST00000638448 RGL2O15211 777 aa7.24□□□□□ -1.25
GYPB-216ENST00000638448 BCL11BQ9C0K0 894 aaPredicted RBP7.24□□□□□ -1.25
GYPB-216ENST00000638448 G3V3G9 751 aa7.22□□□□□ -1.25
GYPB-216ENST00000638448 ST18O60284 1047 aa7.22□□□□□ -1.25
GYPB-216ENST00000638448 MS4A4AQ96JQ5 239 aa7.22□□□□□ -1.25
GYPB-216ENST00000638448 PHF8Q9UPP1 1060 aa7.22□□□□□ -1.25
GYPB-216ENST00000638448 SOX12O15370 315 aa7.21□□□□□ -1.26
GYPB-216ENST00000638448 PLSCR2Q9NRY7 297 aa7.21□□□□□ -1.26
GYPB-216ENST00000638448 TAOK2Q9UL54 1235 aa7.21□□□□□ -1.26
GYPB-216ENST00000638448 STK24Q9Y6E0 443 aa7.21□□□□□ -1.26
GYPB-216ENST00000638448 STK25O00506 426 aa7.2□□□□□ -1.26
GYPB-216ENST00000638448 TMEM121BQ9BXQ6 578 aaPredicted RBP7.19□□□□□ -1.26
GYPB-216ENST00000638448 SNPHO15079 494 aa7.18□□□□□ -1.26
GYPB-216ENST00000638448 MICALL2Q8IY33 904 aa7.18□□□□□ -1.26
GYPB-216ENST00000638448 FBXO22Q8NEZ5 403 aa7.17□□□□□ -1.26
GYPB-216ENST00000638448 NLRP6P59044 892 aa7.16□□□□□ -1.26
GYPB-216ENST00000638448 MFRPQ9BY79 579 aa7.16□□□□□ -1.26
GYPB-216ENST00000638448 TMEM92Q6UXU6 159 aa7.14□□□□□ -1.27
GYPB-216ENST00000638448 MARVELD3Q96A59 401 aa7.14□□□□□ -1.27
GYPB-216ENST00000638448 HOXB3P14651 431 aaPredicted RBP7.12□□□□□ -1.27
GYPB-216ENST00000638448 CDAN1Q8IWY9 1227 aa7.1□□□□□ -1.27
GYPB-216ENST00000638448 EMP3P54852 163 aa7.09□□□□□ -1.27
GYPB-216ENST00000638448 HS6ST3Q8IZP7 471 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms