RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 HIRIP3Q9BW71 556 aaPredicted RBP22.76■■□□□ 1.23
CACNA1A-253ENST00000637927 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
CACNA1A-253ENST00000637927 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
CACNA1A-253ENST00000637927 PLCB2Q00722 1185 aa22.73■■□□□ 1.23
CACNA1A-253ENST00000637927 FBXO3Q9UK99 471 aa22.73■■□□□ 1.23
CACNA1A-253ENST00000637927 ISY1Q9ULR0 285 aaKnown RBP22.73■■□□□ 1.23
CACNA1A-253ENST00000637927 NAP1L2Q9ULW6 460 aaPredicted RBP22.72■■□□□ 1.23
CACNA1A-253ENST00000637927 GLIPR1L2Q4G1C9 344 aa22.68■■□□□ 1.22
CACNA1A-253ENST00000637927 LAS1LQ9Y4W2 734 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-253ENST00000637927 RTN4Q9NQC3 1192 aaKnown RBP22.67■■□□□ 1.22
CACNA1A-253ENST00000637927 TONSLQ96HA7 1378 aa22.67■■□□□ 1.22
CACNA1A-253ENST00000637927 DNTTIP2Q5QJE6 756 aaKnown RBP22.65■■□□□ 1.22
CACNA1A-253ENST00000637927 WDR43Q15061 677 aaKnown RBP eCLIP22.61■■□□□ 1.21
CACNA1A-253ENST00000637927 MYH16Q9H6N6 1097 aa22.61■■□□□ 1.21
CACNA1A-253ENST00000637927 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
CACNA1A-253ENST00000637927 ARID4BQ4LE39 1312 aaPredicted RBP22.6■■□□□ 1.21
CACNA1A-253ENST00000637927 PTMAP06454 111 aaKnown RBP22.59■■□□□ 1.21
CACNA1A-253ENST00000637927 CCDC136Q96JN2 1154 aa22.58■■□□□ 1.21
CACNA1A-253ENST00000637927 TMC1Q8TDI8 760 aa22.58■■□□□ 1.2
CACNA1A-253ENST00000637927 ERICH6BQ5W0A0 696 aa22.58■■□□□ 1.2
CACNA1A-253ENST00000637927 CSRNP3Q8WYN3 585 aa22.57■■□□□ 1.2
CACNA1A-253ENST00000637927 ZRSR1Q15695 479 aaKnown RBP22.56■■□□□ 1.2
CACNA1A-253ENST00000637927 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
CACNA1A-253ENST00000637927 KCNH8Q96L42 1107 aa22.52■■□□□ 1.2
CACNA1A-253ENST00000637927 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.51■■□□□ 1.19
CACNA1A-253ENST00000637927 PPP1R15AO75807 674 aaPredicted RBP22.51■■□□□ 1.19
CACNA1A-253ENST00000637927 ARID3AQ99856 593 aa22.51■■□□□ 1.19
CACNA1A-253ENST00000637927 SOX12O15370 315 aa22.51■■□□□ 1.19
CACNA1A-253ENST00000637927 TRIM44Q96DX7 344 aaPredicted RBP22.49■■□□□ 1.19
CACNA1A-253ENST00000637927 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
CACNA1A-253ENST00000637927 TNNT2P45379 298 aaPredicted RBP22.42■■□□□ 1.18
CACNA1A-253ENST00000637927 GOLGA2Q08379 1002 aa22.4■■□□□ 1.18
CACNA1A-253ENST00000637927 MRS2Q9HD23 443 aa22.39■■□□□ 1.18
CACNA1A-253ENST00000637927 RRP7BPQ9NSQ0 103 aa22.39■■□□□ 1.17
CACNA1A-253ENST00000637927 RGL3Q3MIN7 710 aa22.38■■□□□ 1.17
CACNA1A-253ENST00000637927 SPRYD3Q8NCJ5 442 aa22.38■■□□□ 1.17
CACNA1A-253ENST00000637927 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.17
CACNA1A-253ENST00000637927 NAP1L5Q96NT1 182 aaPredicted RBP22.33■■□□□ 1.17
CACNA1A-253ENST00000637927 OS9Q13438 667 aaPredicted RBP22.32■■□□□ 1.16
CACNA1A-253ENST00000637927 FGD1P98174 961 aa22.32■■□□□ 1.16
CACNA1A-253ENST00000637927 WWC1Q8IX03 1113 aa22.32■■□□□ 1.16
CACNA1A-253ENST00000637927 ZNF330Q9Y3S2 320 aaPredicted RBP22.3■■□□□ 1.16
CACNA1A-253ENST00000637927 TSPY4P0CV99 314 aa22.28■■□□□ 1.16
CACNA1A-253ENST00000637927 TSPY10P0CW01 314 aa22.28■■□□□ 1.16
CACNA1A-253ENST00000637927 TRHP20396 242 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-253ENST00000637927 KCNJ4P48050 445 aa22.21■■□□□ 1.15
CACNA1A-253ENST00000637927 KRI1Q8N9T8 703 aaKnown RBP22.18■■□□□ 1.14
CACNA1A-253ENST00000637927 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
CACNA1A-253ENST00000637927 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-253ENST00000637927 MIER1Q8N108 512 aa22.16■■□□□ 1.14
CACNA1A-253ENST00000637927 APBB1O00213 710 aa22.15■■□□□ 1.14
CACNA1A-253ENST00000637927 FRAT1Q92837 279 aaPredicted RBP22.14■■□□□ 1.14
CACNA1A-253ENST00000637927 MLECQ14165 292 aa22.14■■□□□ 1.13
CACNA1A-253ENST00000637927 CASC1Q6TDU7 716 aa22.13■■□□□ 1.13
CACNA1A-253ENST00000637927 RGS3P49796 1198 aa22.12■■□□□ 1.13
CACNA1A-253ENST00000637927 DRC7Q8IY82 874 aa22.12■■□□□ 1.13
CACNA1A-253ENST00000637927 GOLGA6L22H0YM25 854 aa22.12■■□□□ 1.13
CACNA1A-253ENST00000637927 NOC3LQ8WTT2 800 aaKnown RBP22.11■■□□□ 1.13
CACNA1A-253ENST00000637927 CCDC9Q9Y3X0 531 aaKnown RBP22.11■■□□□ 1.13
CACNA1A-253ENST00000637927 CREBRFQ8IUR6 639 aa22.11■■□□□ 1.13
CACNA1A-253ENST00000637927 BECN1Q14457 450 aa22.08■■□□□ 1.13
CACNA1A-253ENST00000637927 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
CACNA1A-253ENST00000637927 SAFB2Q14151 953 aaKnown RBP eCLIP22.04■■□□□ 1.12
CACNA1A-253ENST00000637927 CC2D1BQ5T0F9 858 aaKnown RBP22.02■■□□□ 1.12
CACNA1A-253ENST00000637927 GNL2Q13823 731 aaKnown RBP22.02■■□□□ 1.12
CACNA1A-253ENST00000637927 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
CACNA1A-253ENST00000637927 EIF4G2P78344 907 aaKnown RBP eCLIP22.01■■□□□ 1.11
CACNA1A-253ENST00000637927 VPS53Q5VIR6 699 aa21.97■■□□□ 1.11
CACNA1A-253ENST00000637927 PNNQ9H307 717 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-253ENST00000637927 PATL2C9JE40 543 aaKnown RBP21.96■■□□□ 1.11
CACNA1A-253ENST00000637927 POGKQ9P215 609 aa21.95■■□□□ 1.1
CACNA1A-253ENST00000637927 GOLGA6L6A8MZA4 724 aa21.94■■□□□ 1.1
CACNA1A-253ENST00000637927 KNSTRNQ9Y448 316 aa21.93■■□□□ 1.1
CACNA1A-253ENST00000637927 A0A0U1RQG5 324 aaPredicted RBP21.93■■□□□ 1.1
CACNA1A-253ENST00000637927 GOLGA6L4A6NEF3 574 aa21.92■■□□□ 1.1
CACNA1A-253ENST00000637927 PAK3O75914 559 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-253ENST00000637927 SUPT16HQ9Y5B9 1047 aaKnown RBP21.92■■□□□ 1.1
CACNA1A-253ENST00000637927 CFAP53Q96M91 514 aa21.91■■□□□ 1.1
CACNA1A-253ENST00000637927 HSP90B1P14625 803 aaKnown RBP21.9■■□□□ 1.1
CACNA1A-253ENST00000637927 PLEKHD1A6NEE1 506 aa21.9■■□□□ 1.1
CACNA1A-253ENST00000637927 G3V3G9 751 aa21.9■■□□□ 1.1
CACNA1A-253ENST00000637927 DCAF8Q5TAQ9 597 aa21.9■■□□□ 1.1
CACNA1A-253ENST00000637927 KLHL34Q8N239 644 aa21.89■■□□□ 1.1
CACNA1A-253ENST00000637927 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.09
CACNA1A-253ENST00000637927 CHMP3Q9Y3E7 222 aa21.88■■□□□ 1.09
CACNA1A-253ENST00000637927 MAPK8IP3Q9UPT6 1336 aa21.87■■□□□ 1.09
CACNA1A-253ENST00000637927 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-253ENST00000637927 DDRGK1Q96HY6 314 aa21.85■■□□□ 1.09
CACNA1A-253ENST00000637927 KIAA2012Q0VF49 1180 aa21.83■■□□□ 1.09
CACNA1A-253ENST00000637927 RAD21O60216 631 aa21.83■■□□□ 1.08
CACNA1A-253ENST00000637927 CNKSR2Q8WXI2 1034 aa21.81■■□□□ 1.08
CACNA1A-253ENST00000637927 NOL8Q76FK4 1167 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-253ENST00000637927 MSH5O43196 834 aa21.8■■□□□ 1.08
CACNA1A-253ENST00000637927 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
CACNA1A-253ENST00000637927 GZF1Q9H116 711 aaPredicted RBP21.79■■□□□ 1.08
CACNA1A-253ENST00000637927 SIN3AQ96ST3 1273 aa21.78■■□□□ 1.08
CACNA1A-253ENST00000637927 CSB-PGBD3P0DP91 1061 aa21.77■■□□□ 1.08
CACNA1A-253ENST00000637927 CLIP1P30622 1438 aa21.77■■□□□ 1.08
CACNA1A-253ENST00000637927 B4GALNT3Q6L9W6 998 aa21.77■■□□□ 1.07
CACNA1A-253ENST00000637927 STK26Q9P289 416 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms