RNA–Protein interactions for RNA: ENST00000637406.1

ATP1A3-213, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 5

Gene ATP1A3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-213ENST00000637406 SAMD1Q6SPF0 538 aaPredicted RBP10.57□□□□□ -0.72
ATP1A3-213ENST00000637406 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
ATP1A3-213ENST00000637406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
ATP1A3-213ENST00000637406 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
ATP1A3-213ENST00000637406 C1orf115Q9H7X2 142 aa10.55□□□□□ -0.72
ATP1A3-213ENST00000637406 NECTIN2Q92692 538 aa10.54□□□□□ -0.72
ATP1A3-213ENST00000637406 IGSF3O75054 1194 aa10.52□□□□□ -0.73
ATP1A3-213ENST00000637406 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
ATP1A3-213ENST00000637406 ZNF219Q9P2Y4 722 aaPredicted RBP10.5□□□□□ -0.73
ATP1A3-213ENST00000637406 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
ATP1A3-213ENST00000637406 SLC24A3Q9HC58 644 aa10.47□□□□□ -0.73
ATP1A3-213ENST00000637406 ZC3H15Q8WU90 426 aaKnown RBP10.46□□□□□ -0.73
ATP1A3-213ENST00000637406 GTPBP6O43824 516 aaPredicted RBP10.45□□□□□ -0.74
ATP1A3-213ENST00000637406 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
ATP1A3-213ENST00000637406 NKX1-1Q15270 411 aaPredicted RBP10.43□□□□□ -0.74
ATP1A3-213ENST00000637406 APBB1O00213 710 aa10.42□□□□□ -0.74
ATP1A3-213ENST00000637406 ARID3CA6NKF2 412 aa10.41□□□□□ -0.74
ATP1A3-213ENST00000637406 RAD21O60216 631 aa10.41□□□□□ -0.74
ATP1A3-213ENST00000637406 CIZ1Q9ULV3 898 aaPredicted RBP10.4□□□□□ -0.74
ATP1A3-213ENST00000637406 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
ATP1A3-213ENST00000637406 KCNV2Q8TDN2 545 aa10.37□□□□□ -0.75
ATP1A3-213ENST00000637406 PUS7Q96PZ0 661 aaKnown RBP10.37□□□□□ -0.75
ATP1A3-213ENST00000637406 DMRT2Q9Y5R5 561 aa10.36□□□□□ -0.75
ATP1A3-213ENST00000637406 RGS22Q8NE09 1264 aa10.35□□□□□ -0.75
ATP1A3-213ENST00000637406 PLCD3Q8N3E9 789 aa10.34□□□□□ -0.75
ATP1A3-213ENST00000637406 TRAIPQ9BWF2 469 aa10.3□□□□□ -0.76
ATP1A3-213ENST00000637406 CHMP4AQ9BY43 222 aa10.29□□□□□ -0.76
ATP1A3-213ENST00000637406 WDR70Q9NW82 654 aa10.28□□□□□ -0.76
ATP1A3-213ENST00000637406 MTMR7Q9Y216 660 aa10.28□□□□□ -0.76
ATP1A3-213ENST00000637406 TMCO4Q5TGY1 634 aa10.27□□□□□ -0.77
ATP1A3-213ENST00000637406 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
ATP1A3-213ENST00000637406 RYDENQ9NUL5 291 aaKnown RBP10.27□□□□□ -0.77
ATP1A3-213ENST00000637406 STAG3Q9UJ98 1225 aa10.27□□□□□ -0.77
ATP1A3-213ENST00000637406 RBM25P49756 843 aaKnown RBP10.26□□□□□ -0.77
ATP1A3-213ENST00000637406 IL27Q8NEV9 243 aa10.25□□□□□ -0.77
ATP1A3-213ENST00000637406 ZMYND10O75800 440 aa10.24□□□□□ -0.77
ATP1A3-213ENST00000637406 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
ATP1A3-213ENST00000637406 RNF25Q96BH1 459 aaPredicted RBP10.24□□□□□ -0.77
ATP1A3-213ENST00000637406 MKRN3Q13064 507 aaKnown RBP10.23□□□□□ -0.77
ATP1A3-213ENST00000637406 AEBP1Q8IUX7 1158 aa10.22□□□□□ -0.77
ATP1A3-213ENST00000637406 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
ATP1A3-213ENST00000637406 MFAP1P55081 439 aaKnown RBP10.2□□□□□ -0.78
ATP1A3-213ENST00000637406 FLIIQ13045 1269 aa10.2□□□□□ -0.78
ATP1A3-213ENST00000637406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.2□□□□□ -0.78
ATP1A3-213ENST00000637406 MSH5O43196 834 aa10.19□□□□□ -0.78
ATP1A3-213ENST00000637406 FOXD4L5Q5VV16 416 aaPredicted RBP10.18□□□□□ -0.78
ATP1A3-213ENST00000637406 FOXD4L4Q8WXT5 416 aaPredicted RBP10.18□□□□□ -0.78
ATP1A3-213ENST00000637406 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
ATP1A3-213ENST00000637406 E9PSI1 815 aa10.16□□□□□ -0.78
ATP1A3-213ENST00000637406 STK25O00506 426 aa10.16□□□□□ -0.78
ATP1A3-213ENST00000637406 MIER1Q8N108 512 aa10.16□□□□□ -0.78
ATP1A3-213ENST00000637406 ZNF428Q96B54 188 aa10.16□□□□□ -0.78
ATP1A3-213ENST00000637406 RIOK3O14730 519 aaKnown RBP10.15□□□□□ -0.78
ATP1A3-213ENST00000637406 KDM4CQ9H3R0 1056 aa10.15□□□□□ -0.78
ATP1A3-213ENST00000637406 ARHGEF1Q92888 912 aaKnown RBP10.14□□□□□ -0.79
ATP1A3-213ENST00000637406 AK7Q96M32 723 aa10.14□□□□□ -0.79
ATP1A3-213ENST00000637406 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
ATP1A3-213ENST00000637406 TESPA1A2RU30 521 aaPredicted RBP10.13□□□□□ -0.79
ATP1A3-213ENST00000637406 BARGINQ6ZT62 677 aa10.13□□□□□ -0.79
ATP1A3-213ENST00000637406 GZF1Q9H116 711 aaPredicted RBP10.11□□□□□ -0.79
ATP1A3-213ENST00000637406 A6NJR5 290 aa10.1□□□□□ -0.79
ATP1A3-213ENST00000637406 TRAK2O60296 914 aa10.1□□□□□ -0.79
ATP1A3-213ENST00000637406 USP35Q9P2H5 1018 aa10.08□□□□□ -0.8
ATP1A3-213ENST00000637406 SEMA3EO15041 775 aa10.07□□□□□ -0.8
ATP1A3-213ENST00000637406 POLA2Q14181 598 aa10.07□□□□□ -0.8
ATP1A3-213ENST00000637406 VGFO15240 615 aaPredicted RBP10.05□□□□□ -0.8
ATP1A3-213ENST00000637406 GSE1Q14687 1217 aa10.05□□□□□ -0.8
ATP1A3-213ENST00000637406 SMYD5Q6GMV2 418 aa10.04□□□□□ -0.8
ATP1A3-213ENST00000637406 CADPS2Q86UW7 1296 aa10.04□□□□□ -0.8
ATP1A3-213ENST00000637406 RSPH4AQ5TD94 716 aa10.03□□□□□ -0.8
ATP1A3-213ENST00000637406 FBXW7Q969H0 707 aa10.02□□□□□ -0.81
ATP1A3-213ENST00000637406 BRD2P25440 801 aaKnown RBP10.01□□□□□ -0.81
ATP1A3-213ENST00000637406 CLUAP1Q96AJ1 413 aa10.01□□□□□ -0.81
ATP1A3-213ENST00000637406 CCDC97Q96F63 343 aaPredicted RBP10.01□□□□□ -0.81
ATP1A3-213ENST00000637406 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
ATP1A3-213ENST00000637406 ZNF316A6NFI3 1004 aaPredicted RBP9.99□□□□□ -0.81
ATP1A3-213ENST00000637406 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
ATP1A3-213ENST00000637406 STK24Q9Y6E0 443 aa9.99□□□□□ -0.81
ATP1A3-213ENST00000637406 ONECUT3O60422 494 aaPredicted RBP9.98□□□□□ -0.81
ATP1A3-213ENST00000637406 PDE4DQ08499 809 aa9.98□□□□□ -0.81
ATP1A3-213ENST00000637406 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
ATP1A3-213ENST00000637406 POLR3GLQ9BT43 218 aa9.97□□□□□ -0.81
ATP1A3-213ENST00000637406 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
ATP1A3-213ENST00000637406 E2F4Q16254 413 aa9.95□□□□□ -0.82
ATP1A3-213ENST00000637406 FAM177A1Q8N128 213 aaPredicted RBP9.95□□□□□ -0.82
ATP1A3-213ENST00000637406 PATL2C9JE40 543 aaKnown RBP9.94□□□□□ -0.82
ATP1A3-213ENST00000637406 TRIM66O15016 1216 aa9.94□□□□□ -0.82
ATP1A3-213ENST00000637406 SGIP1Q9BQI5 828 aa9.94□□□□□ -0.82
ATP1A3-213ENST00000637406 FAM117AQ9C073 453 aa9.94□□□□□ -0.82
ATP1A3-213ENST00000637406 IRF5Q13568 498 aa9.93□□□□□ -0.82
ATP1A3-213ENST00000637406 DHX37Q8IY37 1157 aaKnown RBP9.93□□□□□ -0.82
ATP1A3-213ENST00000637406 DDRGK1Q96HY6 314 aa9.91□□□□□ -0.82
ATP1A3-213ENST00000637406 ZNF777Q9ULD5 760 aaPredicted RBP9.91□□□□□ -0.82
ATP1A3-213ENST00000637406 AMOTL2Q9Y2J4 779 aa9.91□□□□□ -0.82
ATP1A3-213ENST00000637406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
ATP1A3-213ENST00000637406 PROSER2Q86WR7 435 aaPredicted RBP9.89□□□□□ -0.83
ATP1A3-213ENST00000637406 UBE2Q2Q8WVN8 375 aa9.89□□□□□ -0.83
ATP1A3-213ENST00000637406 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
ATP1A3-213ENST00000637406 GPIHBP1Q8IV16 184 aa9.88□□□□□ -0.83
ATP1A3-213ENST00000637406 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms