RNA–Protein interactions for RNA: ENST00000637389.1

POLR1D-222, Transcript of RNA polymerase I and III subunit D, human

TSL 5

Gene POLR1D, Length 129 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1D-222	ENST00000637389	ASTL	Q6HA08	431 aa	Predicted RBP	4.72	□□□□□ -1.65
POLR1D-222	ENST00000637389	ATMIN	O43313	823 aa	Predicted RBP	4.7	□□□□□ -1.66
POLR1D-222	ENST00000637389	PHF12	Q96QT6	1004 aa		4.7	□□□□□ -1.66
POLR1D-222	ENST00000637389	CREBZF	Q9NS37	354 aa		4.69	□□□□□ -1.66
POLR1D-222	ENST00000637389	POTEJ	P0CG39	1038 aa		4.68	□□□□□ -1.66
POLR1D-222	ENST00000637389	MMRN1	Q13201	1228 aa		4.67	□□□□□ -1.66
POLR1D-222	ENST00000637389	SPNS2	Q8IVW8	549 aa		4.65	□□□□□ -1.67
POLR1D-222	ENST00000637389	MS4A3	Q96HJ5	214 aa		4.64	□□□□□ -1.67
POLR1D-222	ENST00000637389	SEC24B	O95487	1268 aa		4.63	□□□□□ -1.67
POLR1D-222	ENST00000637389	ATN1	P54259	1190 aa	Predicted RBP	4.62	□□□□□ -1.67
POLR1D-222	ENST00000637389	ST18	O60284	1047 aa		4.6	□□□□□ -1.67
POLR1D-222	ENST00000637389	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	4.59	□□□□□ -1.67
POLR1D-222	ENST00000637389	SNPH	O15079	494 aa		4.58	□□□□□ -1.68
POLR1D-222	ENST00000637389	SLAIN1	Q8ND83	568 aa		4.58	□□□□□ -1.68
POLR1D-222	ENST00000637389	ZBTB22	O15209	634 aa		4.57	□□□□□ -1.68
POLR1D-222	ENST00000637389	TIE1	P35590	1138 aa		4.56	□□□□□ -1.68
POLR1D-222	ENST00000637389	POTEF	A5A3E0	1075 aa		4.55	□□□□□ -1.68
POLR1D-222	ENST00000637389	IER5L	Q5T953	404 aa		4.54	□□□□□ -1.68
POLR1D-222	ENST00000637389	TSPYL2	Q9H2G4	693 aa	Predicted RBP	4.53	□□□□□ -1.68
POLR1D-222	ENST00000637389	BMP2K	Q9NSY1	1161 aa	Predicted RBP	4.53	□□□□□ -1.68
POLR1D-222	ENST00000637389	MNX1	P50219	401 aa	Predicted RBP	4.51	□□□□□ -1.69
POLR1D-222	ENST00000637389	KIF12	Q96FN5	646 aa		4.51	□□□□□ -1.69
POLR1D-222	ENST00000637389	COLQ	Q9Y215	455 aa	Predicted RBP	4.5	□□□□□ -1.69
POLR1D-222	ENST00000637389	CCDC61	Q9Y6R9	512 aa		4.5	□□□□□ -1.69
POLR1D-222	ENST00000637389	TTLL13P	A6NNM8	815 aa		4.48	□□□□□ -1.69
POLR1D-222	ENST00000637389	PLCG2	P16885	1265 aa		4.48	□□□□□ -1.69
POLR1D-222	ENST00000637389	PLEKHG5	O94827	1062 aa		4.47	□□□□□ -1.69
POLR1D-222	ENST00000637389	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	4.47	□□□□□ -1.69
POLR1D-222	ENST00000637389	MAP3K13	O43283	966 aa		4.46	□□□□□ -1.7
POLR1D-222	ENST00000637389	MARVELD3	Q96A59	401 aa		4.46	□□□□□ -1.7
POLR1D-222	ENST00000637389	SGIP1	Q9BQI5	828 aa		4.46	□□□□□ -1.7
POLR1D-222	ENST00000637389	TRIM35	Q9UPQ4	493 aa		4.46	□□□□□ -1.7
POLR1D-222	ENST00000637389	EMP3	P54852	163 aa		4.45	□□□□□ -1.7
POLR1D-222	ENST00000637389	SPDYE4	A6NLX3	237 aa		4.44	□□□□□ -1.7
POLR1D-222	ENST00000637389	TRPC6	Q9Y210	931 aa		4.43	□□□□□ -1.7
POLR1D-222	ENST00000637389	HS3ST6	Q96QI5	342 aa		4.41	□□□□□ -1.7
POLR1D-222	ENST00000637389	PCDHB13	Q9Y5F0	798 aa		4.41	□□□□□ -1.7
POLR1D-222	ENST00000637389	FAM205C	A6NFA0	338 aa		4.4	□□□□□ -1.71
POLR1D-222	ENST00000637389	RNF166	Q96A37	237 aa	Predicted RBP	4.4	□□□□□ -1.71
POLR1D-222	ENST00000637389	KRTAP3-3	Q9BYR6	98 aa		4.39	□□□□□ -1.71
POLR1D-222	ENST00000637389	KRTAP3-2	Q9BYR7	98 aa		4.39	□□□□□ -1.71
POLR1D-222	ENST00000637389	OCEL1	Q9H607	264 aa		4.39	□□□□□ -1.71
POLR1D-222	ENST00000637389	IRX5	P78411	483 aa	Predicted RBP	4.37	□□□□□ -1.71
POLR1D-222	ENST00000637389	TMEM106C	Q9BVX2	250 aa		4.37	□□□□□ -1.71
POLR1D-222	ENST00000637389	C3orf67	Q6ZVT6	689 aa		4.36	□□□□□ -1.71
POLR1D-222	ENST00000637389	L3MBTL3	Q96JM7	780 aa	Predicted RBP	4.35	□□□□□ -1.71
POLR1D-222	ENST00000637389	MYT1L	Q9UL68	1186 aa		4.35	□□□□□ -1.71
POLR1D-222	ENST00000637389	PTGER2	P43116	358 aa		4.34	□□□□□ -1.71
POLR1D-222	ENST00000637389	RASEF	Q8IZ41	740 aa		4.33	□□□□□ -1.72
POLR1D-222	ENST00000637389	MIER1	Q8N108	512 aa		4.32	□□□□□ -1.72
POLR1D-222	ENST00000637389	ZBTB47	Q9UFB7	747 aa	Predicted RBP	4.32	□□□□□ -1.72
POLR1D-222	ENST00000637389	ERBB3	P21860	1342 aa		4.31	□□□□□ -1.72
POLR1D-222	ENST00000637389	POTEB3	A0JP26	581 aa		4.31	□□□□□ -1.72
POLR1D-222	ENST00000637389	POTEB	Q6S5H4	581 aa		4.31	□□□□□ -1.72
POLR1D-222	ENST00000637389	IFNL1	Q8IU54	200 aa		4.31	□□□□□ -1.72
POLR1D-222	ENST00000637389	ZNF710	Q8N1W2	664 aa		4.3	□□□□□ -1.72
POLR1D-222	ENST00000637389	GOLGA2	Q08379	1002 aa		4.28	□□□□□ -1.72
POLR1D-222	ENST00000637389		G3V3G9	751 aa		4.27	□□□□□ -1.73
POLR1D-222	ENST00000637389	DCAF8	Q5TAQ9	597 aa		4.27	□□□□□ -1.73
POLR1D-222	ENST00000637389	FAM212A	Q96EL1	285 aa		4.27	□□□□□ -1.73
POLR1D-222	ENST00000637389	RIMBP2	O15034	1052 aa		4.26	□□□□□ -1.73
POLR1D-222	ENST00000637389	HOXB1	P14653	301 aa	Predicted RBP	4.26	□□□□□ -1.73
POLR1D-222	ENST00000637389	MKRN3	Q13064	507 aa	Known RBP	4.26	□□□□□ -1.73
POLR1D-222	ENST00000637389	DOK7	Q18PE1	504 aa		4.25	□□□□□ -1.73
POLR1D-222	ENST00000637389	PLCD3	Q8N3E9	789 aa		4.24	□□□□□ -1.73
POLR1D-222	ENST00000637389	PLA2G2E	Q9NZK7	142 aa		4.24	□□□□□ -1.73
POLR1D-222	ENST00000637389	ZNF687	Q8N1G0	1237 aa		4.22	□□□□□ -1.73
POLR1D-222	ENST00000637389	VARS2	Q5ST30	1063 aa	Known RBP	4.21	□□□□□ -1.74
POLR1D-222	ENST00000637389	PDCD7	Q8N8D1	485 aa	Known RBP	4.21	□□□□□ -1.74
POLR1D-222	ENST00000637389	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	8e-13	■□□□□ 10
POLR1D-222	ENST00000637389	HOXB3	P14651	431 aa	Predicted RBP	4.19	□□□□□ -1.74
POLR1D-222	ENST00000637389	NUBP1	P53384	320 aa		4.19	□□□□□ -1.74
POLR1D-222	ENST00000637389	ANKRD13D	Q6ZTN6	518 aa		4.19	□□□□□ -1.74
POLR1D-222	ENST00000637389	PROM2	Q8N271	834 aa		4.19	□□□□□ -1.74
POLR1D-222	ENST00000637389	ZSWIM6	Q9HCJ5	1215 aa		4.19	□□□□□ -1.74
POLR1D-222	ENST00000637389	HCST	Q9UBK5	93 aa		4.19	□□□□□ -1.74
POLR1D-222	ENST00000637389	RGS20	O76081	388 aa		4.16	□□□□□ -1.74
POLR1D-222	ENST00000637389	ZNF467	Q7Z7K2	595 aa	Predicted RBP	4.16	□□□□□ -1.74
POLR1D-222	ENST00000637389	BOLA1	Q9Y3E2	137 aa		4.16	□□□□□ -1.74
POLR1D-222	ENST00000637389	PYGB	P11216	843 aa		4.15	□□□□□ -1.75
POLR1D-222	ENST00000637389	IRX2	Q9BZI1	471 aa	Predicted RBP	4.15	□□□□□ -1.75
POLR1D-222	ENST00000637389	PCDHB8	Q9UN66	801 aa		4.15	□□□□□ -1.75
POLR1D-222	ENST00000637389	LSM11	P83369	360 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
POLR1D-222	ENST00000637389	PBX2	P40425	430 aa		4.1	□□□□□ -1.75
POLR1D-222	ENST00000637389	GSE1	Q14687	1217 aa		4.09	□□□□□ -1.75
POLR1D-222	ENST00000637389	ILDR1	Q86SU0	546 aa	Predicted RBP	4.09	□□□□□ -1.75
POLR1D-222	ENST00000637389	PSEN1	P49768	467 aa		4.08	□□□□□ -1.76
POLR1D-222	ENST00000637389	DPY19L2	Q6NUT2	758 aa		4.08	□□□□□ -1.76
POLR1D-222	ENST00000637389	GPR153	Q6NV75	609 aa		4.08	□□□□□ -1.76
POLR1D-222	ENST00000637389	ZNF316	A6NFI3	1004 aa	Predicted RBP	4.06	□□□□□ -1.76
POLR1D-222	ENST00000637389	CSRNP3	Q8WYN3	585 aa		4.06	□□□□□ -1.76
POLR1D-222	ENST00000637389	STAC3	Q96MF2	364 aa		4.06	□□□□□ -1.76
POLR1D-222	ENST00000637389	CHRM1	P11229	460 aa	Predicted RBP	4.05	□□□□□ -1.76
POLR1D-222	ENST00000637389	PDAP1	Q13442	181 aa	Known RBP	4.04	□□□□□ -1.76
POLR1D-222	ENST00000637389	CABP2	Q9NPB3	220 aa		4.04	□□□□□ -1.76
POLR1D-222	ENST00000637389	ARSI	Q5FYB1	569 aa		4.03	□□□□□ -1.76
POLR1D-222	ENST00000637389	IFFO2	Q5TF58	517 aa		4.03	□□□□□ -1.76
POLR1D-222	ENST00000637389		Q6ZNB5	142 aa		4.03	□□□□□ -1.76
POLR1D-222	ENST00000637389	ADGRD1	Q6QNK2	874 aa		4	□□□□□ -1.77
POLR1D-222	ENST00000637389	TK2	O00142	265 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms