RNA–Protein interactions for RNA: ENST00000637368.1

NRXN1-256, Transcript of neurexin 1, human

TSL 5

Gene NRXN1, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-256	ENST00000637368	POTEJ	P0CG39	1038 aa		12.39	□□□□□ -0.43
NRXN1-256	ENST00000637368	LCE2D	Q5TA82	110 aa	Predicted RBP	12.39	□□□□□ -0.43
NRXN1-256	ENST00000637368	ATMIN	O43313	823 aa	Predicted RBP	12.37	□□□□□ -0.43
NRXN1-256	ENST00000637368	MS4A3	Q96HJ5	214 aa		12.34	□□□□□ -0.43
NRXN1-256	ENST00000637368	SCUBE2	Q9NQ36	999 aa		12.34	□□□□□ -0.43
NRXN1-256	ENST00000637368	MNX1	P50219	401 aa	Predicted RBP	12.33	□□□□□ -0.44
NRXN1-256	ENST00000637368	FAM163A	Q96GL9	167 aa	Predicted RBP	12.28	□□□□□ -0.44
NRXN1-256	ENST00000637368	ATN1	P54259	1190 aa	Predicted RBP	12.2	□□□□□ -0.46
NRXN1-256	ENST00000637368	SPDYE4	A6NLX3	237 aa		12.18	□□□□□ -0.46
NRXN1-256	ENST00000637368	POTEF	A5A3E0	1075 aa		12.13	□□□□□ -0.47
NRXN1-256	ENST00000637368	CCDC61	Q9Y6R9	512 aa		12.13	□□□□□ -0.47
NRXN1-256	ENST00000637368	CDAN1	Q8IWY9	1227 aa		12.12	□□□□□ -0.47
NRXN1-256	ENST00000637368	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.09	□□□□□ -0.47
NRXN1-256	ENST00000637368	TIE1	P35590	1138 aa		12.08	□□□□□ -0.48
NRXN1-256	ENST00000637368	KIF12	Q96FN5	646 aa		12.08	□□□□□ -0.48
NRXN1-256	ENST00000637368	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.07	□□□□□ -0.48
NRXN1-256	ENST00000637368	SEC24B	O95487	1268 aa		11.98	□□□□□ -0.49
NRXN1-256	ENST00000637368	TRPC6	Q9Y210	931 aa		11.98	□□□□□ -0.49
NRXN1-256	ENST00000637368	IER5L	Q5T953	404 aa		11.97	□□□□□ -0.49
NRXN1-256	ENST00000637368	COLQ	Q9Y215	455 aa	Predicted RBP	11.97	□□□□□ -0.49
NRXN1-256	ENST00000637368	TTLL13P	A6NNM8	815 aa		11.94	□□□□□ -0.5
NRXN1-256	ENST00000637368	MAP3K13	O43283	966 aa		11.94	□□□□□ -0.5
NRXN1-256	ENST00000637368	ST18	O60284	1047 aa		11.92	□□□□□ -0.5
NRXN1-256	ENST00000637368	CSRNP3	Q8WYN3	585 aa		11.91	□□□□□ -0.5
NRXN1-256	ENST00000637368	MMRN1	Q13201	1228 aa		11.9	□□□□□ -0.5
NRXN1-256	ENST00000637368	SLAIN1	Q8ND83	568 aa		11.87	□□□□□ -0.51
NRXN1-256	ENST00000637368	SGIP1	Q9BQI5	828 aa		11.87	□□□□□ -0.51
NRXN1-256	ENST00000637368	PROM2	Q8N271	834 aa		11.86	□□□□□ -0.51
NRXN1-256	ENST00000637368	TRIM35	Q9UPQ4	493 aa		11.86	□□□□□ -0.51
NRXN1-256	ENST00000637368	SPNS2	Q8IVW8	549 aa		11.85	□□□□□ -0.51
NRXN1-256	ENST00000637368	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.85	□□□□□ -0.51
NRXN1-256	ENST00000637368	RASEF	Q8IZ41	740 aa		11.81	□□□□□ -0.52
NRXN1-256	ENST00000637368	PLEKHG5	O94827	1062 aa		11.8	□□□□□ -0.52
NRXN1-256	ENST00000637368	PCDHB13	Q9Y5F0	798 aa		11.75	□□□□□ -0.53
NRXN1-256	ENST00000637368	PLCG2	P16885	1265 aa		11.74	□□□□□ -0.53
NRXN1-256	ENST00000637368	SNPH	O15079	494 aa		11.73	□□□□□ -0.53
NRXN1-256	ENST00000637368	IRX5	P78411	483 aa	Predicted RBP	11.69	□□□□□ -0.54
NRXN1-256	ENST00000637368	MIER1	Q8N108	512 aa		11.67	□□□□□ -0.54
NRXN1-256	ENST00000637368	TMEM106C	Q9BVX2	250 aa		11.66	□□□□□ -0.54
NRXN1-256	ENST00000637368	IFNL1	Q8IU54	200 aa		11.65	□□□□□ -0.54
NRXN1-256	ENST00000637368	OCEL1	Q9H607	264 aa		11.61	□□□□□ -0.55
NRXN1-256	ENST00000637368	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.61	□□□□□ -0.55
NRXN1-256	ENST00000637368	MARVELD3	Q96A59	401 aa		11.6	□□□□□ -0.55
NRXN1-256	ENST00000637368	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.59	□□□□□ -0.55
NRXN1-256	ENST00000637368	NUBP1	P53384	320 aa		11.56	□□□□□ -0.56
NRXN1-256	ENST00000637368	EMP3	P54852	163 aa		11.52	□□□□□ -0.57
NRXN1-256	ENST00000637368	FAM212A	Q96EL1	285 aa		11.52	□□□□□ -0.57
NRXN1-256	ENST00000637368	PLCD3	Q8N3E9	789 aa		11.51	□□□□□ -0.57
NRXN1-256	ENST00000637368	KRTAP3-3	Q9BYR6	98 aa		11.51	□□□□□ -0.57
NRXN1-256	ENST00000637368	KRTAP3-2	Q9BYR7	98 aa		11.51	□□□□□ -0.57
NRXN1-256	ENST00000637368	HS3ST6	Q96QI5	342 aa		11.47	□□□□□ -0.57
NRXN1-256	ENST00000637368	C3orf67	Q6ZVT6	689 aa		11.44	□□□□□ -0.58
NRXN1-256	ENST00000637368	POTEB3	A0JP26	581 aa		11.41	□□□□□ -0.58
NRXN1-256	ENST00000637368	POTEB	Q6S5H4	581 aa		11.41	□□□□□ -0.58
NRXN1-256	ENST00000637368	FAM205C	A6NFA0	338 aa		11.4	□□□□□ -0.58
NRXN1-256	ENST00000637368	PDCD7	Q8N8D1	485 aa	Known RBP	11.4	□□□□□ -0.58
NRXN1-256	ENST00000637368	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.39	□□□□□ -0.59
NRXN1-256	ENST00000637368	EHMT2	Q96KQ7	1210 aa		11.33	□□□□□ -0.6
NRXN1-256	ENST00000637368	PYGB	P11216	843 aa		11.3	□□□□□ -0.6
NRXN1-256	ENST00000637368	PCDHB8	Q9UN66	801 aa		11.29	□□□□□ -0.6
NRXN1-256	ENST00000637368	GOLGA2	Q08379	1002 aa		11.27	□□□□□ -0.61
NRXN1-256	ENST00000637368	MKRN3	Q13064	507 aa	Known RBP	11.27	□□□□□ -0.61
NRXN1-256	ENST00000637368	RNF166	Q96A37	237 aa	Predicted RBP	11.27	□□□□□ -0.61
NRXN1-256	ENST00000637368	DCAF8	Q5TAQ9	597 aa		11.25	□□□□□ -0.61
NRXN1-256	ENST00000637368	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.23	□□□□□ -0.61
NRXN1-256	ENST00000637368	HOXB1	P14653	301 aa	Predicted RBP	11.22	□□□□□ -0.61
NRXN1-256	ENST00000637368	ILDR1	Q86SU0	546 aa	Predicted RBP	11.22	□□□□□ -0.61
NRXN1-256	ENST00000637368	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
NRXN1-256	ENST00000637368	HOXB3	P14651	431 aa	Predicted RBP	11.2	□□□□□ -0.62
NRXN1-256	ENST00000637368	MYT1L	Q9UL68	1186 aa		11.16	□□□□□ -0.62
NRXN1-256	ENST00000637368	ERBB3	P21860	1342 aa		11.15	□□□□□ -0.62
NRXN1-256	ENST00000637368	DOK7	Q18PE1	504 aa		11.14	□□□□□ -0.63
NRXN1-256	ENST00000637368	ZNF710	Q8N1W2	664 aa		11.14	□□□□□ -0.63
NRXN1-256	ENST00000637368	PTGER2	P43116	358 aa		11.13	□□□□□ -0.63
NRXN1-256	ENST00000637368		G3V3G9	751 aa		11.09	□□□□□ -0.63
NRXN1-256	ENST00000637368	CHRM1	P11229	460 aa	Predicted RBP	11.09	□□□□□ -0.63
NRXN1-256	ENST00000637368	PSEN1	P49768	467 aa		11.09	□□□□□ -0.63
NRXN1-256	ENST00000637368	GSE1	Q14687	1217 aa		11.09	□□□□□ -0.63
NRXN1-256	ENST00000637368	BOLA1	Q9Y3E2	137 aa		11.09	□□□□□ -0.63
NRXN1-256	ENST00000637368	RIMBP2	O15034	1052 aa		11.07	□□□□□ -0.64
NRXN1-256	ENST00000637368	VARS2	Q5ST30	1063 aa	Known RBP	11.05	□□□□□ -0.64
NRXN1-256	ENST00000637368	DPY19L2	Q6NUT2	758 aa		11.04	□□□□□ -0.64
NRXN1-256	ENST00000637368	ZNF687	Q8N1G0	1237 aa		11.04	□□□□□ -0.64
NRXN1-256	ENST00000637368	ZSWIM6	Q9HCJ5	1215 aa		11.03	□□□□□ -0.64
NRXN1-256	ENST00000637368	PDAP1	Q13442	181 aa	Known RBP	11.01	□□□□□ -0.65
NRXN1-256	ENST00000637368	CABP2	Q9NPB3	220 aa		10.94	□□□□□ -0.66
NRXN1-256	ENST00000637368	FBXO3	Q9UK99	471 aa		10.94	□□□□□ -0.66
NRXN1-256	ENST00000637368	GPR153	Q6NV75	609 aa		10.9	□□□□□ -0.66
NRXN1-256	ENST00000637368	KLHL34	Q8N239	644 aa		10.85	□□□□□ -0.67
NRXN1-256	ENST00000637368	FKBP8	Q14318	412 aa		10.84	□□□□□ -0.67
NRXN1-256	ENST00000637368	ANKRD13D	Q6ZTN6	518 aa		10.84	□□□□□ -0.67
NRXN1-256	ENST00000637368	LSM11	P83369	360 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
NRXN1-256	ENST00000637368	PLA2G2E	Q9NZK7	142 aa		10.82	□□□□□ -0.68
NRXN1-256	ENST00000637368	TMEM92	Q6UXU6	159 aa		10.81	□□□□□ -0.68
NRXN1-256	ENST00000637368	MICALL2	Q8IY33	904 aa		10.8	□□□□□ -0.68
NRXN1-256	ENST00000637368	VASP	P50552	380 aa	Predicted RBP	10.78	□□□□□ -0.68
NRXN1-256	ENST00000637368	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.76	□□□□□ -0.69
NRXN1-256	ENST00000637368	PBX2	P40425	430 aa		10.75	□□□□□ -0.69
NRXN1-256	ENST00000637368	HCST	Q9UBK5	93 aa		10.75	□□□□□ -0.69
NRXN1-256	ENST00000637368	ARSI	Q5FYB1	569 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms