RNA–Protein interactions for RNA: ENST00000636947.1

CACNB4-239, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 5,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-239ENST00000636947 CYB5RLQ6IPT4 315 aa10.98□□□□□ -0.65
CACNB4-239ENST00000636947 NACADO15069 1562 aa10.98□□□□□ -0.65
CACNB4-239ENST00000636947 POGKQ9P215 609 aa10.97□□□□□ -0.65
CACNB4-239ENST00000636947 EID1Q9Y6B2 187 aa10.95□□□□□ -0.66
CACNB4-239ENST00000636947 KANK1Q14678 1352 aa10.94□□□□□ -0.66
CACNB4-239ENST00000636947 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
CACNB4-239ENST00000636947 CECR2Q9BXF3 1484 aa10.93□□□□□ -0.66
CACNB4-239ENST00000636947 CFDP1Q9UEE9 299 aaPredicted RBP10.92□□□□□ -0.66
CACNB4-239ENST00000636947 CARMIL2Q6F5E8 1435 aa10.9□□□□□ -0.67
CACNB4-239ENST00000636947 ANP32CO43423 234 aa10.9□□□□□ -0.67
CACNB4-239ENST00000636947 RSF1Q96T23 1441 aaPredicted RBP10.89□□□□□ -0.67
CACNB4-239ENST00000636947 TMC1Q8TDI8 760 aa10.88□□□□□ -0.67
CACNB4-239ENST00000636947 CDK11BP21127 795 aaKnown RBP10.88□□□□□ -0.67
CACNB4-239ENST00000636947 CCDC180Q9P1Z9 1646 aa10.88□□□□□ -0.67
CACNB4-239ENST00000636947 CSB-PGBD3P0DP91 1061 aa10.88□□□□□ -0.67
CACNB4-239ENST00000636947 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
CACNB4-239ENST00000636947 SF3B2Q13435 895 aaKnown RBP10.87□□□□□ -0.67
CACNB4-239ENST00000636947 KDM2AQ9Y2K7 1162 aa10.87□□□□□ -0.67
CACNB4-239ENST00000636947 GGT6Q6P531 493 aa10.85□□□□□ -0.67
CACNB4-239ENST00000636947 TONSLQ96HA7 1378 aa10.82□□□□□ -0.68
CACNB4-239ENST00000636947 CDCA8Q53HL2 280 aa10.82□□□□□ -0.68
CACNB4-239ENST00000636947 ANP32AP39687 249 aaKnown RBP10.81□□□□□ -0.68
CACNB4-239ENST00000636947 CFAP53Q96M91 514 aa10.81□□□□□ -0.68
CACNB4-239ENST00000636947 CLIP1P30622 1438 aa10.8□□□□□ -0.68
CACNB4-239ENST00000636947 WDR43Q15061 677 aaKnown RBP eCLIP10.8□□□□□ -0.68
CACNB4-239ENST00000636947 G3V3G9 751 aa10.79□□□□□ -0.68
CACNB4-239ENST00000636947 PPM1GO15355 546 aaPredicted RBP10.79□□□□□ -0.68
CACNB4-239ENST00000636947 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
CACNB4-239ENST00000636947 MSH5O43196 834 aa10.79□□□□□ -0.68
CACNB4-239ENST00000636947 MYH16Q9H6N6 1097 aa10.79□□□□□ -0.68
CACNB4-239ENST00000636947 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
CACNB4-239ENST00000636947 PAK3O75914 559 aaPredicted RBP10.79□□□□□ -0.68
CACNB4-239ENST00000636947 EIF5BO60841 1220 aaKnown RBP10.78□□□□□ -0.68
CACNB4-239ENST00000636947 KLHL34Q8N239 644 aa10.77□□□□□ -0.69
CACNB4-239ENST00000636947 KIF27Q86VH2 1401 aa10.77□□□□□ -0.69
CACNB4-239ENST00000636947 RGL3Q3MIN7 710 aa10.76□□□□□ -0.69
CACNB4-239ENST00000636947 FAM69CQ0P6D2 419 aa10.76□□□□□ -0.69
CACNB4-239ENST00000636947 FKBP8Q14318 412 aa10.76□□□□□ -0.69
CACNB4-239ENST00000636947 EIF4G1Q04637 1599 aaKnown RBP10.75□□□□□ -0.69
CACNB4-239ENST00000636947 CCNB3Q8WWL7 1395 aa10.72□□□□□ -0.69
CACNB4-239ENST00000636947 EVA1CP58658 441 aa10.72□□□□□ -0.69
CACNB4-239ENST00000636947 WRNQ14191 1432 aaPredicted RBP eCLIP10.71□□□□□ -0.69
CACNB4-239ENST00000636947 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
CACNB4-239ENST00000636947 RRP7BPQ9NSQ0 103 aa10.69□□□□□ -0.7
CACNB4-239ENST00000636947 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
CACNB4-239ENST00000636947 SOX12O15370 315 aa10.68□□□□□ -0.7
CACNB4-239ENST00000636947 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.68□□□□□ -0.7
CACNB4-239ENST00000636947 ISY1Q9ULR0 285 aaKnown RBP10.67□□□□□ -0.7
CACNB4-239ENST00000636947 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
CACNB4-239ENST00000636947 KRI1Q8N9T8 703 aaKnown RBP10.67□□□□□ -0.7
CACNB4-239ENST00000636947 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
CACNB4-239ENST00000636947 MAPK8IP3Q9UPT6 1336 aa10.66□□□□□ -0.7
CACNB4-239ENST00000636947 GTF2E1P29083 439 aaPredicted RBP10.66□□□□□ -0.7
CACNB4-239ENST00000636947 NBR1Q14596 966 aa10.66□□□□□ -0.7
CACNB4-239ENST00000636947 HSP90AA1P07900 732 aaKnown RBP10.66□□□□□ -0.7
CACNB4-239ENST00000636947 ZNF330Q9Y3S2 320 aaPredicted RBP10.65□□□□□ -0.7
CACNB4-239ENST00000636947 WASHC2CQ9Y4E1 1318 aa10.65□□□□□ -0.71
CACNB4-239ENST00000636947 ATF3P18847 181 aa10.65□□□□□ -0.71
CACNB4-239ENST00000636947 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.71
CACNB4-239ENST00000636947 NGDNQ8NEJ9 315 aaKnown RBP10.64□□□□□ -0.71
CACNB4-239ENST00000636947 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
CACNB4-239ENST00000636947 GLIPR1L2Q4G1C9 344 aa10.63□□□□□ -0.71
CACNB4-239ENST00000636947 WASHC2AQ641Q2 1341 aa10.62□□□□□ -0.71
CACNB4-239ENST00000636947 SOGA1O94964 1423 aa10.62□□□□□ -0.71
CACNB4-239ENST00000636947 KNSTRNQ9Y448 316 aa10.62□□□□□ -0.71
CACNB4-239ENST00000636947 DCAF1Q9Y4B6 1507 aa10.62□□□□□ -0.71
CACNB4-239ENST00000636947 UPF2Q9HAU5 1272 aaKnown RBP10.62□□□□□ -0.71
CACNB4-239ENST00000636947 STK26Q9P289 416 aa10.62□□□□□ -0.71
CACNB4-239ENST00000636947 SMARCA2P51531 1590 aa10.61□□□□□ -0.71
CACNB4-239ENST00000636947 CHMP4AQ9BY43 222 aa10.61□□□□□ -0.71
CACNB4-239ENST00000636947 RTF1Q92541 710 aaKnown RBP10.6□□□□□ -0.71
CACNB4-239ENST00000636947 HMGB2P26583 209 aaKnown RBP10.6□□□□□ -0.71
CACNB4-239ENST00000636947 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
CACNB4-239ENST00000636947 KIF3BO15066 747 aa10.59□□□□□ -0.71
CACNB4-239ENST00000636947 HNRNPUQ00839 825 aaKnown RBP eCLIP10.59□□□□□ -0.71
CACNB4-239ENST00000636947 SPAG9O60271 1321 aaKnown RBP10.59□□□□□ -0.71
CACNB4-239ENST00000636947 OS9Q13438 667 aaPredicted RBP10.58□□□□□ -0.72
CACNB4-239ENST00000636947 ANP32BQ92688 251 aaKnown RBP10.58□□□□□ -0.72
CACNB4-239ENST00000636947 CUX2O14529 1486 aa10.58□□□□□ -0.72
CACNB4-239ENST00000636947 JPH4Q96JJ6 628 aa10.58□□□□□ -0.72
CACNB4-239ENST00000636947 SAFB2Q14151 953 aaKnown RBP eCLIP10.58□□□□□ -0.72
CACNB4-239ENST00000636947 CWC22Q9HCG8 908 aaKnown RBP10.58□□□□□ -0.72
CACNB4-239ENST00000636947 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
CACNB4-239ENST00000636947 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
CACNB4-239ENST00000636947 CARMIL1Q5VZK9 1371 aa10.57□□□□□ -0.72
CACNB4-239ENST00000636947 PIP4K2BP78356 416 aa10.56□□□□□ -0.72
CACNB4-239ENST00000636947 LAS1LQ9Y4W2 734 aaKnown RBP10.56□□□□□ -0.72
CACNB4-239ENST00000636947 BAZ1AQ9NRL2 1556 aaPredicted RBP10.56□□□□□ -0.72
CACNB4-239ENST00000636947 CLSTN1O94985 981 aa10.55□□□□□ -0.72
CACNB4-239ENST00000636947 PPP1R1BQ9UD71 204 aaPredicted RBP10.55□□□□□ -0.72
CACNB4-239ENST00000636947 DDX10Q13206 875 aaKnown RBP10.55□□□□□ -0.72
CACNB4-239ENST00000636947 FAM9BQ8IZU0 186 aa10.54□□□□□ -0.72
CACNB4-239ENST00000636947 EEA1Q15075 1411 aa10.53□□□□□ -0.72
CACNB4-239ENST00000636947 RSPH4AQ5TD94 716 aa10.53□□□□□ -0.72
CACNB4-239ENST00000636947 CADPSQ9ULU8 1353 aa10.53□□□□□ -0.72
CACNB4-239ENST00000636947 MIER1Q8N108 512 aa10.53□□□□□ -0.72
CACNB4-239ENST00000636947 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
CACNB4-239ENST00000636947 PTPRGP23470 1445 aa10.52□□□□□ -0.72
CACNB4-239ENST00000636947 U2SURPO15042 1029 aaKnown RBP10.52□□□□□ -0.73
CACNB4-239ENST00000636947 CARD11Q9BXL7 1154 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms