RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 BAZ1BQ9UIG0 1483 aaKnown RBP8.65□□□□□ -1.03
TCF4-277ENST00000635990 CYB5RLQ6IPT4 315 aa8.62□□□□□ -1.03
TCF4-277ENST00000635990 TAOK2Q9UL54 1235 aa8.62□□□□□ -1.03
TCF4-277ENST00000635990 SENP3-EIF4A1A0A087X0R7 540 aa8.62□□□□□ -1.03
TCF4-277ENST00000635990 POGKQ9P215 609 aa8.61□□□□□ -1.03
TCF4-277ENST00000635990 TONSLQ96HA7 1378 aa8.61□□□□□ -1.03
TCF4-277ENST00000635990 SAFB2Q14151 953 aaKnown RBP eCLIP8.61□□□□□ -1.03
TCF4-277ENST00000635990 FAM9BQ8IZU0 186 aa8.6□□□□□ -1.03
TCF4-277ENST00000635990 HIRIP3Q9BW71 556 aaPredicted RBP8.6□□□□□ -1.03
TCF4-277ENST00000635990 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
TCF4-277ENST00000635990 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
TCF4-277ENST00000635990 GGT6Q6P531 493 aa8.59□□□□□ -1.03
TCF4-277ENST00000635990 LAS1LQ9Y4W2 734 aaKnown RBP8.59□□□□□ -1.03
TCF4-277ENST00000635990 TNNT2P45379 298 aaPredicted RBP8.59□□□□□ -1.04
TCF4-277ENST00000635990 WDR43Q15061 677 aaKnown RBP eCLIP8.58□□□□□ -1.04
TCF4-277ENST00000635990 CFDP1Q9UEE9 299 aaPredicted RBP8.57□□□□□ -1.04
TCF4-277ENST00000635990 STK26Q9P289 416 aa8.56□□□□□ -1.04
TCF4-277ENST00000635990 MEX3CQ5U5Q3 659 aaKnown RBP8.56□□□□□ -1.04
TCF4-277ENST00000635990 NCBP3Q53F19 620 aaKnown RBP8.56□□□□□ -1.04
TCF4-277ENST00000635990 HSP90AA1P07900 732 aaKnown RBP8.55□□□□□ -1.04
TCF4-277ENST00000635990 RTL5Q5HYW3 569 aaPredicted RBP8.54□□□□□ -1.04
TCF4-277ENST00000635990 ZNF330Q9Y3S2 320 aaPredicted RBP8.53□□□□□ -1.04
TCF4-277ENST00000635990 NACADO15069 1562 aa8.53□□□□□ -1.04
TCF4-277ENST00000635990 CECR2Q9BXF3 1484 aa8.53□□□□□ -1.04
TCF4-277ENST00000635990 ZCCHC6Q5VYS8 1495 aaKnown RBP8.52□□□□□ -1.05
TCF4-277ENST00000635990 NUTM2DQ5VT03 806 aaPredicted RBP8.51□□□□□ -1.05
TCF4-277ENST00000635990 KLHL34Q8N239 644 aa8.51□□□□□ -1.05
TCF4-277ENST00000635990 CSB-PGBD3P0DP91 1061 aa8.51□□□□□ -1.05
TCF4-277ENST00000635990 DDX10Q13206 875 aaKnown RBP8.51□□□□□ -1.05
TCF4-277ENST00000635990 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
TCF4-277ENST00000635990 GOLGA2Q08379 1002 aa8.49□□□□□ -1.05
TCF4-277ENST00000635990 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
TCF4-277ENST00000635990 MSH5O43196 834 aa8.49□□□□□ -1.05
TCF4-277ENST00000635990 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
TCF4-277ENST00000635990 ISY1Q9ULR0 285 aaKnown RBP8.48□□□□□ -1.05
TCF4-277ENST00000635990 SRPK2P78362 688 aaKnown RBP8.48□□□□□ -1.05
TCF4-277ENST00000635990 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
TCF4-277ENST00000635990 MYH16Q9H6N6 1097 aa8.46□□□□□ -1.05
TCF4-277ENST00000635990 SMARCA2P51531 1590 aa8.46□□□□□ -1.06
TCF4-277ENST00000635990 EIF5BO60841 1220 aaKnown RBP8.45□□□□□ -1.06
TCF4-277ENST00000635990 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
TCF4-277ENST00000635990 KANK1Q14678 1352 aa8.44□□□□□ -1.06
TCF4-277ENST00000635990 U2SURPO15042 1029 aaKnown RBP8.44□□□□□ -1.06
TCF4-277ENST00000635990 RSF1Q96T23 1441 aaPredicted RBP8.43□□□□□ -1.06
TCF4-277ENST00000635990 CDK11BP21127 795 aaKnown RBP8.43□□□□□ -1.06
TCF4-277ENST00000635990 TMX4Q9H1E5 349 aaPredicted RBP8.42□□□□□ -1.06
TCF4-277ENST00000635990 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
TCF4-277ENST00000635990 EID1Q9Y6B2 187 aa8.41□□□□□ -1.06
TCF4-277ENST00000635990 G3V3G9 751 aa8.41□□□□□ -1.06
TCF4-277ENST00000635990 DCAF8Q5TAQ9 597 aa8.41□□□□□ -1.06
TCF4-277ENST00000635990 EVA1CP58658 441 aa8.41□□□□□ -1.06
TCF4-277ENST00000635990 AMER1Q5JTC6 1135 aaPredicted RBP8.41□□□□□ -1.06
TCF4-277ENST00000635990 CC2D1BQ5T0F9 858 aaKnown RBP8.41□□□□□ -1.06
TCF4-277ENST00000635990 KIF27Q86VH2 1401 aa8.4□□□□□ -1.06
TCF4-277ENST00000635990 KNSTRNQ9Y448 316 aa8.4□□□□□ -1.06
TCF4-277ENST00000635990 CLSTN1O94985 981 aa8.4□□□□□ -1.06
TCF4-277ENST00000635990 OS9Q13438 667 aaPredicted RBP8.4□□□□□ -1.06
TCF4-277ENST00000635990 PDS5BQ9NTI5 1447 aa8.4□□□□□ -1.07
TCF4-277ENST00000635990 CFAP53Q96M91 514 aa8.4□□□□□ -1.07
TCF4-277ENST00000635990 CUX2O14529 1486 aa8.39□□□□□ -1.07
TCF4-277ENST00000635990 CARD11Q9BXL7 1154 aa8.39□□□□□ -1.07
TCF4-277ENST00000635990 PRDM2Q13029 1718 aa8.39□□□□□ -1.07
TCF4-277ENST00000635990 CLIP1P30622 1438 aa8.39□□□□□ -1.07
TCF4-277ENST00000635990 TDRD9Q8NDG6 1382 aaKnown RBP8.39□□□□□ -1.07
TCF4-277ENST00000635990 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
TCF4-277ENST00000635990 NAP1L2Q9ULW6 460 aaPredicted RBP8.39□□□□□ -1.07
TCF4-277ENST00000635990 CCNB3Q8WWL7 1395 aa8.39□□□□□ -1.07
TCF4-277ENST00000635990 UPF2Q9HAU5 1272 aaKnown RBP8.39□□□□□ -1.07
TCF4-277ENST00000635990 DCAF8L1A6NGE4 600 aa8.38□□□□□ -1.07
TCF4-277ENST00000635990 LTV1Q96GA3 475 aaPredicted RBP8.38□□□□□ -1.07
TCF4-277ENST00000635990 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.38□□□□□ -1.07
TCF4-277ENST00000635990 MRS2Q9HD23 443 aa8.38□□□□□ -1.07
TCF4-277ENST00000635990 MAPK8IP3Q9UPT6 1336 aa8.37□□□□□ -1.07
TCF4-277ENST00000635990 PIP4K2BP78356 416 aa8.37□□□□□ -1.07
TCF4-277ENST00000635990 IRX6P78412 446 aaPredicted RBP8.37□□□□□ -1.07
TCF4-277ENST00000635990 DCAF11Q8TEB1 546 aa8.37□□□□□ -1.07
TCF4-277ENST00000635990 WRNQ14191 1432 aaPredicted RBP eCLIP8.37□□□□□ -1.07
TCF4-277ENST00000635990 PPP1R1BQ9UD71 204 aaPredicted RBP8.36□□□□□ -1.07
TCF4-277ENST00000635990 SOGA1O94964 1423 aa8.36□□□□□ -1.07
TCF4-277ENST00000635990 KIF3BO15066 747 aa8.35□□□□□ -1.07
TCF4-277ENST00000635990 HNRNPMP52272 730 aaKnown RBP eCLIP8.35□□□□□ -1.07
TCF4-277ENST00000635990 CARMIL2Q6F5E8 1435 aa8.35□□□□□ -1.07
TCF4-277ENST00000635990 NGDNQ8NEJ9 315 aaKnown RBP8.35□□□□□ -1.07
TCF4-277ENST00000635990 SYTL4Q96C24 671 aaPredicted RBP8.35□□□□□ -1.07
TCF4-277ENST00000635990 KAT6BQ8WYB5 2073 aa8.35□□□□□ -1.07
TCF4-277ENST00000635990 WASHC2CQ9Y4E1 1318 aa8.35□□□□□ -1.07
TCF4-277ENST00000635990 FOXD1Q16676 465 aa8.34□□□□□ -1.07
TCF4-277ENST00000635990 FTSJ3Q8IY81 847 aaKnown RBP8.34□□□□□ -1.07
TCF4-277ENST00000635990 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
TCF4-277ENST00000635990 RTF1Q92541 710 aaKnown RBP8.33□□□□□ -1.08
TCF4-277ENST00000635990 CHMP3Q9Y3E7 222 aa8.33□□□□□ -1.08
TCF4-277ENST00000635990 ANP32AP39687 249 aaKnown RBP8.32□□□□□ -1.08
TCF4-277ENST00000635990 PRKCSHP14314 528 aaPredicted RBP8.32□□□□□ -1.08
TCF4-277ENST00000635990 FKBP8Q14318 412 aa8.32□□□□□ -1.08
TCF4-277ENST00000635990 NUDCQ9Y266 331 aa8.32□□□□□ -1.08
TCF4-277ENST00000635990 CARMIL1Q5VZK9 1371 aa8.31□□□□□ -1.08
TCF4-277ENST00000635990 GTF2E1P29083 439 aaPredicted RBP8.31□□□□□ -1.08
TCF4-277ENST00000635990 CDCA8Q53HL2 280 aa8.31□□□□□ -1.08
TCF4-277ENST00000635990 NUTM2BA6NNL0 878 aaPredicted RBP8.3□□□□□ -1.08
TCF4-277ENST00000635990 NUTM2EB1AL46 878 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms