RNA–Protein interactions for RNA: ENST00000635835.1

CACNB4-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,807 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-215	ENST00000635835	LOC105371045	A0A1W2PR82	267 aa		10.88	□□□□□ -0.67
CACNB4-215	ENST00000635835	NOP58	Q9Y2X3	529 aa	Known RBP	10.87	□□□□□ -0.67
CACNB4-215	ENST00000635835	DCAF8L2	P0C7V8	631 aa		10.85	□□□□□ -0.67
CACNB4-215	ENST00000635835	HSP90B1	P14625	803 aa	Known RBP	10.85	□□□□□ -0.67
CACNB4-215	ENST00000635835	FAM43A	Q8N2R8	423 aa		10.85	□□□□□ -0.67
CACNB4-215	ENST00000635835	HAP1	P54257	671 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNB4-215	ENST00000635835	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.84	□□□□□ -0.67
CACNB4-215	ENST00000635835	TAOK2	Q9UL54	1235 aa		10.84	□□□□□ -0.67
CACNB4-215	ENST00000635835	CALD1	Q05682	793 aa	Known RBP	10.83	□□□□□ -0.68
CACNB4-215	ENST00000635835	USP35	Q9P2H5	1018 aa		10.82	□□□□□ -0.68
CACNB4-215	ENST00000635835	CHRM1	P11229	460 aa	Predicted RBP	10.81	□□□□□ -0.68
CACNB4-215	ENST00000635835	NBR1	Q14596	966 aa		10.81	□□□□□ -0.68
CACNB4-215	ENST00000635835	BBX	Q8WY36	941 aa	Predicted RBP	10.81	□□□□□ -0.68
CACNB4-215	ENST00000635835	PRDM4	Q9UKN5	801 aa		10.81	□□□□□ -0.68
CACNB4-215	ENST00000635835	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.8	□□□□□ -0.68
CACNB4-215	ENST00000635835	FKBP8	Q14318	412 aa		10.79	□□□□□ -0.68
CACNB4-215	ENST00000635835	TEX2	Q8IWB9	1127 aa		10.79	□□□□□ -0.68
CACNB4-215	ENST00000635835	CDK11B	P21127	795 aa	Known RBP	10.78	□□□□□ -0.68
CACNB4-215	ENST00000635835	GTF2E1	P29083	439 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNB4-215	ENST00000635835	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNB4-215	ENST00000635835	BCAN	Q96GW7	911 aa		10.76	□□□□□ -0.69
CACNB4-215	ENST00000635835	CHMP4B	Q9H444	224 aa	Known RBP	10.75	□□□□□ -0.69
CACNB4-215	ENST00000635835	CANX	P27824	592 aa	Known RBP	10.74	□□□□□ -0.69
CACNB4-215	ENST00000635835	FTSJ3	Q8IY81	847 aa	Known RBP	10.74	□□□□□ -0.69
CACNB4-215	ENST00000635835	ZFP91	Q96JP5	570 aa	Predicted RBP	10.74	□□□□□ -0.69
CACNB4-215	ENST00000635835	STAC3	Q96MF2	364 aa		10.72	□□□□□ -0.69
CACNB4-215	ENST00000635835	PHF23	Q9BUL5	403 aa	Predicted RBP	10.72	□□□□□ -0.69
CACNB4-215	ENST00000635835	HSP90AA1	P07900	732 aa	Known RBP	10.72	□□□□□ -0.69
CACNB4-215	ENST00000635835	NCL	P19338	710 aa	Known RBP	10.71	□□□□□ -0.69
CACNB4-215	ENST00000635835	CNGB1	Q14028	1251 aa	Predicted RBP	10.71	□□□□□ -0.69
CACNB4-215	ENST00000635835	BRPF3	Q9ULD4	1205 aa		10.7	□□□□□ -0.7
CACNB4-215	ENST00000635835	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.68	□□□□□ -0.7
CACNB4-215	ENST00000635835	PPM1G	O15355	546 aa	Predicted RBP	10.68	□□□□□ -0.7
CACNB4-215	ENST00000635835	PAK3	O75914	559 aa	Predicted RBP	10.67	□□□□□ -0.7
CACNB4-215	ENST00000635835	VGF	O15240	615 aa	Predicted RBP	10.65	□□□□□ -0.7
CACNB4-215	ENST00000635835	NEFM	P07197	916 aa		10.65	□□□□□ -0.7
CACNB4-215	ENST00000635835	SECISBP2L	Q93073	1101 aa	Known RBP	10.65	□□□□□ -0.7
CACNB4-215	ENST00000635835	SUPT5H	O00267	1087 aa	Known RBP	10.65	□□□□□ -0.71
CACNB4-215	ENST00000635835	RNF216	Q9NWF9	866 aa	Predicted RBP	10.63	□□□□□ -0.71
CACNB4-215	ENST00000635835	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
CACNB4-215	ENST00000635835	TPRN	Q4KMQ1	711 aa		10.62	□□□□□ -0.71
CACNB4-215	ENST00000635835	ITGAE	P38570	1179 aa		10.61	□□□□□ -0.71
CACNB4-215	ENST00000635835	RGS3	P49796	1198 aa		10.61	□□□□□ -0.71
CACNB4-215	ENST00000635835	IPO9	Q96P70	1041 aa	Known RBP	10.61	□□□□□ -0.71
CACNB4-215	ENST00000635835	PDCL3	Q9H2J4	239 aa		10.61	□□□□□ -0.71
CACNB4-215	ENST00000635835	GSE1	Q14687	1217 aa		10.58	□□□□□ -0.72
CACNB4-215	ENST00000635835	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.58	□□□□□ -0.72
CACNB4-215	ENST00000635835	IRX6	P78412	446 aa	Predicted RBP	10.55	□□□□□ -0.72
CACNB4-215	ENST00000635835	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.54	□□□□□ -0.72
CACNB4-215	ENST00000635835	ANP32A	P39687	249 aa	Known RBP	10.54	□□□□□ -0.72
CACNB4-215	ENST00000635835	HMGB1	P09429	215 aa	Known RBP	10.53	□□□□□ -0.72
CACNB4-215	ENST00000635835	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.53	□□□□□ -0.72
CACNB4-215	ENST00000635835	ARID3A	Q99856	593 aa		10.53	□□□□□ -0.72
CACNB4-215	ENST00000635835	TICAM2	Q86XR7	235 aa		10.52	□□□□□ -0.73
CACNB4-215	ENST00000635835	SHROOM4	Q9ULL8	1493 aa		10.51	□□□□□ -0.73
CACNB4-215	ENST00000635835	CNPY4	Q8N129	248 aa		10.51	□□□□□ -0.73
CACNB4-215	ENST00000635835	TMEM51	Q9NW97	253 aa		10.51	□□□□□ -0.73
CACNB4-215	ENST00000635835	ZNF830	Q96NB3	372 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNB4-215	ENST00000635835	CCDC9	Q9Y3X0	531 aa	Known RBP	10.5	□□□□□ -0.73
CACNB4-215	ENST00000635835	UTP14C	Q5TAP6	766 aa	Known RBP	10.49	□□□□□ -0.73
CACNB4-215	ENST00000635835	RGS22	Q8NE09	1264 aa		10.49	□□□□□ -0.73
CACNB4-215	ENST00000635835	TPM2	P07951	284 aa		10.48	□□□□□ -0.73
CACNB4-215	ENST00000635835	CLGN	O14967	610 aa		10.47	□□□□□ -0.73
CACNB4-215	ENST00000635835	MMP14	P50281	582 aa		10.47	□□□□□ -0.73
CACNB4-215	ENST00000635835	GRIPAP1	Q4V328	841 aa		10.47	□□□□□ -0.73
CACNB4-215	ENST00000635835	PNN	Q9H307	717 aa	Known RBP	10.47	□□□□□ -0.73
CACNB4-215	ENST00000635835	FOXD1	Q16676	465 aa		10.47	□□□□□ -0.73
CACNB4-215	ENST00000635835	ANP32B	Q92688	251 aa	Known RBP	10.47	□□□□□ -0.73
CACNB4-215	ENST00000635835	CLCN1	P35523	988 aa		10.46	□□□□□ -0.74
CACNB4-215	ENST00000635835	POLR3GL	Q9BT43	218 aa		10.46	□□□□□ -0.74
CACNB4-215	ENST00000635835	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.46	□□□□□ -0.74
CACNB4-215	ENST00000635835	KCNA4	P22459	653 aa		10.45	□□□□□ -0.74
CACNB4-215	ENST00000635835	MAP7D2	Q96T17	732 aa		10.45	□□□□□ -0.74
CACNB4-215	ENST00000635835	KCNG1	Q9UIX4	513 aa		10.45	□□□□□ -0.74
CACNB4-215	ENST00000635835	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.45	□□□□□ -0.74
CACNB4-215	ENST00000635835	PTMA	P06454	111 aa	Known RBP	10.44	□□□□□ -0.74
CACNB4-215	ENST00000635835	TMEM132A	Q24JP5	1023 aa		10.44	□□□□□ -0.74
CACNB4-215	ENST00000635835	WWC1	Q8IX03	1113 aa		10.44	□□□□□ -0.74
CACNB4-215	ENST00000635835	PPP4R2	Q9NY27	417 aa		10.44	□□□□□ -0.74
CACNB4-215	ENST00000635835	IRX3	P78415	501 aa	Predicted RBP	10.42	□□□□□ -0.74
CACNB4-215	ENST00000635835	CLSTN1	O94985	981 aa		10.41	□□□□□ -0.74
CACNB4-215	ENST00000635835	FRAT1	Q92837	279 aa	Predicted RBP	10.41	□□□□□ -0.74
CACNB4-215	ENST00000635835	MCC	P23508	829 aa		10.4	□□□□□ -0.74
CACNB4-215	ENST00000635835	PLCD3	Q8N3E9	789 aa		10.4	□□□□□ -0.74
CACNB4-215	ENST00000635835	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.4	□□□□□ -0.75
CACNB4-215	ENST00000635835	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.4	□□□□□ -0.75
CACNB4-215	ENST00000635835	DDRGK1	Q96HY6	314 aa		10.4	□□□□□ -0.75
CACNB4-215	ENST00000635835	FAM193A	P78312	1265 aa		10.38	□□□□□ -0.75
CACNB4-215	ENST00000635835	TAF3	Q5VWG9	929 aa		10.38	□□□□□ -0.75
CACNB4-215	ENST00000635835	PTMS	P20962	102 aa		10.37	□□□□□ -0.75
CACNB4-215	ENST00000635835	PPP4R3B	Q5MIZ7	849 aa		10.37	□□□□□ -0.75
CACNB4-215	ENST00000635835	DMTN	Q08495	405 aa		10.37	□□□□□ -0.75
CACNB4-215	ENST00000635835	DCAF11	Q8TEB1	546 aa		10.37	□□□□□ -0.75
CACNB4-215	ENST00000635835	PRDM10	Q9NQV6	1147 aa		10.37	□□□□□ -0.75
CACNB4-215	ENST00000635835	KIF20A	O95235	890 aa		10.35	□□□□□ -0.75
CACNB4-215	ENST00000635835	PLCD4	Q9BRC7	762 aa		10.35	□□□□□ -0.75
CACNB4-215	ENST00000635835	IGSF3	O75054	1194 aa		10.34	□□□□□ -0.75
CACNB4-215	ENST00000635835	PHF14	O94880	888 aa		10.33	□□□□□ -0.76
CACNB4-215	ENST00000635835	TNNT2	P45379	298 aa	Predicted RBP	10.33	□□□□□ -0.76
CACNB4-215	ENST00000635835	PUS7	Q96PZ0	661 aa	Known RBP	10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms