RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
TRAPPC9-216ENST00000634178 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-216ENST00000634178 MIER1Q8N108 512 aa11.37□□□□□ -0.59
TRAPPC9-216ENST00000634178 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC9-216ENST00000634178 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC9-216ENST00000634178 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
TRAPPC9-216ENST00000634178 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC9-216ENST00000634178 DCBLD2Q96PD2 775 aa11.33□□□□□ -0.6
TRAPPC9-216ENST00000634178 BBXQ8WY36 941 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC9-216ENST00000634178 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
TRAPPC9-216ENST00000634178 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
TRAPPC9-216ENST00000634178 BCANQ96GW7 911 aa11.24□□□□□ -0.61
TRAPPC9-216ENST00000634178 MNX1P50219 401 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-216ENST00000634178 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
TRAPPC9-216ENST00000634178 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
TRAPPC9-216ENST00000634178 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
TRAPPC9-216ENST00000634178 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC9-216ENST00000634178 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC9-216ENST00000634178 RGL2O15211 777 aa11.17□□□□□ -0.62
TRAPPC9-216ENST00000634178 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-216ENST00000634178 CFAP44Q96MT7 982 aa11.15□□□□□ -0.62
TRAPPC9-216ENST00000634178 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
TRAPPC9-216ENST00000634178 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRAPPC9-216ENST00000634178 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC9-216ENST00000634178 GSE1Q14687 1217 aa11.11□□□□□ -0.63
TRAPPC9-216ENST00000634178 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
TRAPPC9-216ENST00000634178 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
TRAPPC9-216ENST00000634178 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
TRAPPC9-216ENST00000634178 TAOK2Q9UL54 1235 aa11.08□□□□□ -0.64
TRAPPC9-216ENST00000634178 ASTLQ6HA08 431 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-216ENST00000634178 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
TRAPPC9-216ENST00000634178 ATMINO43313 823 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC9-216ENST00000634178 METRNQ9UJH8 293 aa11.01□□□□□ -0.65
TRAPPC9-216ENST00000634178 POTEMA6NI47 508 aa11□□□□□ -0.65
TRAPPC9-216ENST00000634178 HS6ST3Q8IZP7 471 aa11□□□□□ -0.65
TRAPPC9-216ENST00000634178 KDM2AQ9Y2K7 1162 aa11□□□□□ -0.65
TRAPPC9-216ENST00000634178 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
TRAPPC9-216ENST00000634178 POTEGQ6S5H5 508 aa10.96□□□□□ -0.65
TRAPPC9-216ENST00000634178 SLC39A7Q92504 469 aa10.96□□□□□ -0.65
TRAPPC9-216ENST00000634178 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.65
TRAPPC9-216ENST00000634178 NUBP1P53384 320 aa10.95□□□□□ -0.66
TRAPPC9-216ENST00000634178 FAM212AQ96EL1 285 aa10.95□□□□□ -0.66
TRAPPC9-216ENST00000634178 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
TRAPPC9-216ENST00000634178 C7P10643 843 aa10.94□□□□□ -0.66
TRAPPC9-216ENST00000634178 TSHZ2Q9NRE2 1034 aa10.94□□□□□ -0.66
TRAPPC9-216ENST00000634178 RIOK3O14730 519 aaKnown RBP10.92□□□□□ -0.66
TRAPPC9-216ENST00000634178 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-216ENST00000634178 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-216ENST00000634178 ATN1P54259 1190 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC9-216ENST00000634178 KIF12Q96FN5 646 aa10.9□□□□□ -0.66
TRAPPC9-216ENST00000634178 POTEFA5A3E0 1075 aa10.89□□□□□ -0.67
TRAPPC9-216ENST00000634178 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
TRAPPC9-216ENST00000634178 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-216ENST00000634178 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-216ENST00000634178 RNF25Q96BH1 459 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-216ENST00000634178 BMP2KQ9NSY1 1161 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-216ENST00000634178 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
TRAPPC9-216ENST00000634178 PRKCSHP14314 528 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC9-216ENST00000634178 MAMSTRQ6ZN01 415 aa10.82□□□□□ -0.68
TRAPPC9-216ENST00000634178 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
TRAPPC9-216ENST00000634178 STK25O00506 426 aa10.81□□□□□ -0.68
TRAPPC9-216ENST00000634178 NBR1Q14596 966 aa10.81□□□□□ -0.68
TRAPPC9-216ENST00000634178 MAP3K13O43283 966 aa10.8□□□□□ -0.68
TRAPPC9-216ENST00000634178 SGIP1Q9BQI5 828 aa10.8□□□□□ -0.68
TRAPPC9-216ENST00000634178 TPRNQ4KMQ1 711 aa10.79□□□□□ -0.68
TRAPPC9-216ENST00000634178 TIE1P35590 1138 aa10.77□□□□□ -0.69
TRAPPC9-216ENST00000634178 SCUBE2Q9NQ36 999 aa10.76□□□□□ -0.69
TRAPPC9-216ENST00000634178 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
TRAPPC9-216ENST00000634178 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
TRAPPC9-216ENST00000634178 GTPBP6O43824 516 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC9-216ENST00000634178 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC9-216ENST00000634178 NKX1-1Q15270 411 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC9-216ENST00000634178 FAM163AQ96GL9 167 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC9-216ENST00000634178 STK24Q9Y6E0 443 aa10.72□□□□□ -0.69
TRAPPC9-216ENST00000634178 BCL11BQ9C0K0 894 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC9-216ENST00000634178 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-216ENST00000634178 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-216ENST00000634178 PYGBP11216 843 aa10.68□□□□□ -0.7
TRAPPC9-216ENST00000634178 ZNF467Q7Z7K2 595 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC9-216ENST00000634178 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.7
TRAPPC9-216ENST00000634178 IER5LQ5T953 404 aa10.62□□□□□ -0.71
TRAPPC9-216ENST00000634178 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
TRAPPC9-216ENST00000634178 SEC24BO95487 1268 aa10.61□□□□□ -0.71
TRAPPC9-216ENST00000634178 IFNL1Q8IU54 200 aa10.6□□□□□ -0.71
TRAPPC9-216ENST00000634178 P3H3Q8IVL6 736 aa10.58□□□□□ -0.72
TRAPPC9-216ENST00000634178 PDAP1Q13442 181 aaKnown RBP10.57□□□□□ -0.72
TRAPPC9-216ENST00000634178 WDR70Q9NW82 654 aa10.54□□□□□ -0.72
TRAPPC9-216ENST00000634178 CDAN1Q8IWY9 1227 aa10.52□□□□□ -0.73
TRAPPC9-216ENST00000634178 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
TRAPPC9-216ENST00000634178 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-216ENST00000634178 ST18O60284 1047 aa10.5□□□□□ -0.73
TRAPPC9-216ENST00000634178 SLAIN1Q8ND83 568 aa10.5□□□□□ -0.73
TRAPPC9-216ENST00000634178 PLCG2P16885 1265 aa10.46□□□□□ -0.73
TRAPPC9-216ENST00000634178 PSEN1P49768 467 aa10.46□□□□□ -0.73
TRAPPC9-216ENST00000634178 PCDHB8Q9UN66 801 aa10.45□□□□□ -0.74
TRAPPC9-216ENST00000634178 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC9-216ENST00000634178 NLRP6P59044 892 aa10.39□□□□□ -0.75
TRAPPC9-216ENST00000634178 SOX12O15370 315 aa10.38□□□□□ -0.75
TRAPPC9-216ENST00000634178 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
TRAPPC9-216ENST00000634178 OCEL1Q9H607 264 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms