RNA–Protein interactions for RNA: ENST00000633167.1

PHACTR4-208, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 5

Gene PHACTR4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-208ENST00000633167 MS4A3Q96HJ5 214 aa11.51□□□□□ -0.57
PHACTR4-208ENST00000633167 ASTLQ6HA08 431 aaPredicted RBP11.49□□□□□ -0.57
PHACTR4-208ENST00000633167 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
PHACTR4-208ENST00000633167 RASEFQ8IZ41 740 aa11.45□□□□□ -0.58
PHACTR4-208ENST00000633167 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-208ENST00000633167 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
PHACTR4-208ENST00000633167 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-208ENST00000633167 SLC39A7Q92504 469 aa11.41□□□□□ -0.58
PHACTR4-208ENST00000633167 C7P10643 843 aa11.4□□□□□ -0.58
PHACTR4-208ENST00000633167 NUBP1P53384 320 aa11.38□□□□□ -0.59
PHACTR4-208ENST00000633167 SGIP1Q9BQI5 828 aa11.38□□□□□ -0.59
PHACTR4-208ENST00000633167 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
PHACTR4-208ENST00000633167 MAP3K13O43283 966 aa11.36□□□□□ -0.59
PHACTR4-208ENST00000633167 TIE1P35590 1138 aa11.35□□□□□ -0.59
PHACTR4-208ENST00000633167 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
PHACTR4-208ENST00000633167 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
PHACTR4-208ENST00000633167 OTUD5Q96G74 571 aa11.32□□□□□ -0.6
PHACTR4-208ENST00000633167 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-208ENST00000633167 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
PHACTR4-208ENST00000633167 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
PHACTR4-208ENST00000633167 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
PHACTR4-208ENST00000633167 PCDHB13Q9Y5F0 798 aa11.27□□□□□ -0.61
PHACTR4-208ENST00000633167 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
PHACTR4-208ENST00000633167 VASPP50552 380 aaPredicted RBP11.22□□□□□ -0.61
PHACTR4-208ENST00000633167 IER5LQ5T953 404 aa11.2□□□□□ -0.62
PHACTR4-208ENST00000633167 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
PHACTR4-208ENST00000633167 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
PHACTR4-208ENST00000633167 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
PHACTR4-208ENST00000633167 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
PHACTR4-208ENST00000633167 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
PHACTR4-208ENST00000633167 TRIM35Q9UPQ4 493 aa11.16□□□□□ -0.62
PHACTR4-208ENST00000633167 SEC24BO95487 1268 aa11.14□□□□□ -0.63
PHACTR4-208ENST00000633167 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
PHACTR4-208ENST00000633167 GSE1Q14687 1217 aa11.13□□□□□ -0.63
PHACTR4-208ENST00000633167 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
PHACTR4-208ENST00000633167 PYGBP11216 843 aa11.1□□□□□ -0.63
PHACTR4-208ENST00000633167 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
PHACTR4-208ENST00000633167 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
PHACTR4-208ENST00000633167 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
PHACTR4-208ENST00000633167 PLCG2P16885 1265 aa11.02□□□□□ -0.65
PHACTR4-208ENST00000633167 POTEMA6NI47 508 aa11.01□□□□□ -0.65
PHACTR4-208ENST00000633167 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
PHACTR4-208ENST00000633167 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
PHACTR4-208ENST00000633167 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
PHACTR4-208ENST00000633167 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
PHACTR4-208ENST00000633167 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
PHACTR4-208ENST00000633167 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
PHACTR4-208ENST00000633167 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
PHACTR4-208ENST00000633167 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-208ENST00000633167 FAM163AQ96GL9 167 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-208ENST00000633167 GOLGA2Q08379 1002 aa10.9□□□□□ -0.66
PHACTR4-208ENST00000633167 PSEN1P49768 467 aa10.89□□□□□ -0.67
PHACTR4-208ENST00000633167 SLAIN1Q8ND83 568 aa10.89□□□□□ -0.67
PHACTR4-208ENST00000633167 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
PHACTR4-208ENST00000633167 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
PHACTR4-208ENST00000633167 TRIM41Q8WV44 630 aa10.88□□□□□ -0.67
PHACTR4-208ENST00000633167 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-208ENST00000633167 PLSCR2Q9NRY7 297 aa10.87□□□□□ -0.67
PHACTR4-208ENST00000633167 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
PHACTR4-208ENST00000633167 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
PHACTR4-208ENST00000633167 L3MBTL3Q96JM7 780 aaPredicted RBP10.82□□□□□ -0.68
PHACTR4-208ENST00000633167 ILDR1Q86SU0 546 aaPredicted RBP10.8□□□□□ -0.68
PHACTR4-208ENST00000633167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.68
PHACTR4-208ENST00000633167 SNPHO15079 494 aa10.79□□□□□ -0.68
PHACTR4-208ENST00000633167 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
PHACTR4-208ENST00000633167 ST18O60284 1047 aa10.75□□□□□ -0.69
PHACTR4-208ENST00000633167 TMEM121BQ9BXQ6 578 aaPredicted RBP10.75□□□□□ -0.69
PHACTR4-208ENST00000633167 CABP2Q9NPB3 220 aa10.74□□□□□ -0.69
PHACTR4-208ENST00000633167 G3V3G9 751 aa10.66□□□□□ -0.7
PHACTR4-208ENST00000633167 CDAN1Q8IWY9 1227 aa10.66□□□□□ -0.7
PHACTR4-208ENST00000633167 RIOK3O14730 519 aaKnown RBP10.65□□□□□ -0.7
PHACTR4-208ENST00000633167 BOLA1Q9Y3E2 137 aa10.65□□□□□ -0.7
PHACTR4-208ENST00000633167 DPY19L2Q6NUT2 758 aa10.62□□□□□ -0.71
PHACTR4-208ENST00000633167 VGFO15240 615 aaPredicted RBP10.61□□□□□ -0.71
PHACTR4-208ENST00000633167 EFCAB3Q8N7B9 438 aa10.61□□□□□ -0.71
PHACTR4-208ENST00000633167 RNF25Q96BH1 459 aaPredicted RBP10.6□□□□□ -0.71
PHACTR4-208ENST00000633167 SOX12O15370 315 aa10.59□□□□□ -0.71
PHACTR4-208ENST00000633167 TAOK2Q9UL54 1235 aa10.58□□□□□ -0.72
PHACTR4-208ENST00000633167 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-208ENST00000633167 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
PHACTR4-208ENST00000633167 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
PHACTR4-208ENST00000633167 EMP3P54852 163 aa10.52□□□□□ -0.73
PHACTR4-208ENST00000633167 DOK7Q18PE1 504 aa10.49□□□□□ -0.73
PHACTR4-208ENST00000633167 MICALL2Q8IY33 904 aa10.49□□□□□ -0.73
PHACTR4-208ENST00000633167 HOXB3P14651 431 aaPredicted RBP10.48□□□□□ -0.73
PHACTR4-208ENST00000633167 MS4A4AQ96JQ5 239 aa10.46□□□□□ -0.73
PHACTR4-208ENST00000633167 PHF8Q9UPP1 1060 aa10.46□□□□□ -0.73
PHACTR4-208ENST00000633167 NLRP6P59044 892 aa10.45□□□□□ -0.74
PHACTR4-208ENST00000633167 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
PHACTR4-208ENST00000633167 HOXB1P14653 301 aaPredicted RBP10.44□□□□□ -0.74
PHACTR4-208ENST00000633167 ZNF710Q8N1W2 664 aa10.44□□□□□ -0.74
PHACTR4-208ENST00000633167 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
PHACTR4-208ENST00000633167 HS3ST6Q96QI5 342 aa10.43□□□□□ -0.74
PHACTR4-208ENST00000633167 ECM2O94769 699 aaPredicted RBP10.42□□□□□ -0.74
PHACTR4-208ENST00000633167 FAM205CA6NFA0 338 aa10.41□□□□□ -0.74
PHACTR4-208ENST00000633167 SPNS2Q8IVW8 549 aa10.41□□□□□ -0.74
PHACTR4-208ENST00000633167 ZSWIM6Q9HCJ5 1215 aa10.41□□□□□ -0.74
PHACTR4-208ENST00000633167 FBXO22Q8NEZ5 403 aa10.4□□□□□ -0.74
PHACTR4-208ENST00000633167 STK24Q9Y6E0 443 aa10.4□□□□□ -0.74
PHACTR4-208ENST00000633167 TMEM92Q6UXU6 159 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms