RNA–Protein interactions for RNA: ENST00000632331.1

LINC01090-203, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 466 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-203ENST00000632331 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
LINC01090-203ENST00000632331 LHX8Q68G74 356 aa11.54□□□□□ -0.56
LINC01090-203ENST00000632331 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
LINC01090-203ENST00000632331 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
LINC01090-203ENST00000632331 KIF12Q96FN5 646 aa11.49□□□□□ -0.57
LINC01090-203ENST00000632331 VASPP50552 380 aaPredicted RBP11.48□□□□□ -0.57
LINC01090-203ENST00000632331 NUBP1P53384 320 aa11.48□□□□□ -0.57
LINC01090-203ENST00000632331 FAM212AQ96EL1 285 aa11.48□□□□□ -0.57
LINC01090-203ENST00000632331 MAP3K13O43283 966 aa11.46□□□□□ -0.57
LINC01090-203ENST00000632331 DCAF8Q5TAQ9 597 aa11.44□□□□□ -0.58
LINC01090-203ENST00000632331 PELP1Q8IZL8 1130 aaKnown RBP11.4□□□□□ -0.58
LINC01090-203ENST00000632331 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
LINC01090-203ENST00000632331 ATMINO43313 823 aaPredicted RBP11.39□□□□□ -0.59
LINC01090-203ENST00000632331 ASTLQ6HA08 431 aaPredicted RBP11.39□□□□□ -0.59
LINC01090-203ENST00000632331 TRPC6Q9Y210 931 aa11.36□□□□□ -0.59
LINC01090-203ENST00000632331 ATN1P54259 1190 aaPredicted RBP11.34□□□□□ -0.59
LINC01090-203ENST00000632331 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
LINC01090-203ENST00000632331 PYGBP11216 843 aa11.33□□□□□ -0.6
LINC01090-203ENST00000632331 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
LINC01090-203ENST00000632331 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
LINC01090-203ENST00000632331 SGIP1Q9BQI5 828 aa11.32□□□□□ -0.6
LINC01090-203ENST00000632331 C7P10643 843 aa11.31□□□□□ -0.6
LINC01090-203ENST00000632331 TIE1P35590 1138 aa11.3□□□□□ -0.6
LINC01090-203ENST00000632331 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
LINC01090-203ENST00000632331 GSE1Q14687 1217 aa11.28□□□□□ -0.6
LINC01090-203ENST00000632331 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
LINC01090-203ENST00000632331 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
LINC01090-203ENST00000632331 POTEB2H3BUK9 544 aa11.26□□□□□ -0.61
LINC01090-203ENST00000632331 SPOCK2Q92563 424 aa11.25□□□□□ -0.61
LINC01090-203ENST00000632331 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
LINC01090-203ENST00000632331 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
LINC01090-203ENST00000632331 SEC24BO95487 1268 aa11.23□□□□□ -0.61
LINC01090-203ENST00000632331 PCDHB8Q9UN66 801 aa11.22□□□□□ -0.61
LINC01090-203ENST00000632331 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
LINC01090-203ENST00000632331 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
LINC01090-203ENST00000632331 MAMSTRQ6ZN01 415 aa11.14□□□□□ -0.63
LINC01090-203ENST00000632331 ZNF467Q7Z7K2 595 aaPredicted RBP11.14□□□□□ -0.63
LINC01090-203ENST00000632331 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
LINC01090-203ENST00000632331 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
LINC01090-203ENST00000632331 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
LINC01090-203ENST00000632331 IER5LQ5T953 404 aa11.12□□□□□ -0.63
LINC01090-203ENST00000632331 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
LINC01090-203ENST00000632331 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
LINC01090-203ENST00000632331 PLCG2P16885 1265 aa11.08□□□□□ -0.64
LINC01090-203ENST00000632331 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
LINC01090-203ENST00000632331 PSEN1P49768 467 aa11.05□□□□□ -0.64
LINC01090-203ENST00000632331 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
LINC01090-203ENST00000632331 PDAP1Q13442 181 aaKnown RBP11.01□□□□□ -0.65
LINC01090-203ENST00000632331 OCEL1Q9H607 264 aa11.01□□□□□ -0.65
LINC01090-203ENST00000632331 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
LINC01090-203ENST00000632331 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
LINC01090-203ENST00000632331 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
LINC01090-203ENST00000632331 CABP2Q9NPB3 220 aa10.94□□□□□ -0.66
LINC01090-203ENST00000632331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC01090-203ENST00000632331 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
LINC01090-203ENST00000632331 RIOK3O14730 519 aaKnown RBP10.87□□□□□ -0.67
LINC01090-203ENST00000632331 POTEMA6NI47 508 aa10.86□□□□□ -0.67
LINC01090-203ENST00000632331 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
LINC01090-203ENST00000632331 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.86□□□□□ -0.67
LINC01090-203ENST00000632331 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
LINC01090-203ENST00000632331 POTEGQ6S5H5 508 aa10.84□□□□□ -0.67
LINC01090-203ENST00000632331 C3orf67Q6ZVT6 689 aa10.83□□□□□ -0.68
LINC01090-203ENST00000632331 G3V3G9 751 aa10.82□□□□□ -0.68
LINC01090-203ENST00000632331 RNF25Q96BH1 459 aaPredicted RBP10.82□□□□□ -0.68
LINC01090-203ENST00000632331 DPY19L2Q6NUT2 758 aa10.8□□□□□ -0.68
LINC01090-203ENST00000632331 EFCAB3Q8N7B9 438 aa10.8□□□□□ -0.68
LINC01090-203ENST00000632331 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
LINC01090-203ENST00000632331 VGFO15240 615 aaPredicted RBP10.79□□□□□ -0.68
LINC01090-203ENST00000632331 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
LINC01090-203ENST00000632331 ZFP91Q96JP5 570 aaPredicted RBP10.79□□□□□ -0.68
LINC01090-203ENST00000632331 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
LINC01090-203ENST00000632331 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
LINC01090-203ENST00000632331 PLSCR2Q9NRY7 297 aa10.74□□□□□ -0.69
LINC01090-203ENST00000632331 BOLA1Q9Y3E2 137 aa10.74□□□□□ -0.69
LINC01090-203ENST00000632331 ILDR1Q86SU0 546 aaPredicted RBP10.73□□□□□ -0.69
LINC01090-203ENST00000632331 SNPHO15079 494 aa10.72□□□□□ -0.69
LINC01090-203ENST00000632331 ST18O60284 1047 aa10.7□□□□□ -0.7
LINC01090-203ENST00000632331 BCL11BQ9C0K0 894 aaPredicted RBP10.7□□□□□ -0.7
LINC01090-203ENST00000632331 STK24Q9Y6E0 443 aa10.7□□□□□ -0.7
LINC01090-203ENST00000632331 SOX12O15370 315 aa10.69□□□□□ -0.7
LINC01090-203ENST00000632331 PKD2Q13563 968 aa10.69□□□□□ -0.7
LINC01090-203ENST00000632331 STK25O00506 426 aa10.68□□□□□ -0.7
LINC01090-203ENST00000632331 PHF8Q9UPP1 1060 aa10.67□□□□□ -0.7
LINC01090-203ENST00000632331 RGL2O15211 777 aa10.66□□□□□ -0.7
LINC01090-203ENST00000632331 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
LINC01090-203ENST00000632331 NLRP6P59044 892 aa10.6□□□□□ -0.71
LINC01090-203ENST00000632331 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
LINC01090-203ENST00000632331 MICALL2Q8IY33 904 aa10.59□□□□□ -0.71
LINC01090-203ENST00000632331 MS4A4AQ96JQ5 239 aa10.59□□□□□ -0.71
LINC01090-203ENST00000632331 TMEM121BQ9BXQ6 578 aaPredicted RBP10.59□□□□□ -0.71
LINC01090-203ENST00000632331 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
LINC01090-203ENST00000632331 EMP3P54852 163 aa10.54□□□□□ -0.72
LINC01090-203ENST00000632331 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
LINC01090-203ENST00000632331 MFRPQ9BY79 579 aa10.53□□□□□ -0.72
LINC01090-203ENST00000632331 FBXO22Q8NEZ5 403 aa10.52□□□□□ -0.73
LINC01090-203ENST00000632331 DOK7Q18PE1 504 aa10.5□□□□□ -0.73
LINC01090-203ENST00000632331 HOXB3P14651 431 aaPredicted RBP10.48□□□□□ -0.73
LINC01090-203ENST00000632331 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
LINC01090-203ENST00000632331 RIMBP2O15034 1052 aa10.47□□□□□ -0.73
LINC01090-203ENST00000632331 FAM205CA6NFA0 338 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms