RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
SYNGAP1-208ENST00000629380 PTMAP06454 111 aaKnown RBP17.34■□□□□ 0.37
SYNGAP1-208ENST00000629380 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
SYNGAP1-208ENST00000629380 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
SYNGAP1-208ENST00000629380 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
SYNGAP1-208ENST00000629380 NRDCO43847 1150 aa17.29■□□□□ 0.36
SYNGAP1-208ENST00000629380 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
SYNGAP1-208ENST00000629380 EEA1Q15075 1411 aa17.27■□□□□ 0.36
SYNGAP1-208ENST00000629380 FAM9BQ8IZU0 186 aa17.26■□□□□ 0.35
SYNGAP1-208ENST00000629380 SCAF1Q9H7N4 1312 aaKnown RBP17.25■□□□□ 0.35
SYNGAP1-208ENST00000629380 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
SYNGAP1-208ENST00000629380 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
SYNGAP1-208ENST00000629380 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
SYNGAP1-208ENST00000629380 A0A0G2JS52 829 aa17.23■□□□□ 0.35
SYNGAP1-208ENST00000629380 PPP1R15AO75807 674 aaPredicted RBP17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 ERICH6BQ5W0A0 696 aa17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 ARID4BQ4LE39 1312 aaPredicted RBP17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
SYNGAP1-208ENST00000629380 L1TD1Q5T7N2 865 aaKnown RBP17.19■□□□□ 0.34
SYNGAP1-208ENST00000629380 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
SYNGAP1-208ENST00000629380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■■■□ 21.3
SYNGAP1-208ENST00000629380 MRS2Q9HD23 443 aa17.15■□□□□ 0.34
SYNGAP1-208ENST00000629380 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-208ENST00000629380 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
SYNGAP1-208ENST00000629380 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
SYNGAP1-208ENST00000629380 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
SYNGAP1-208ENST00000629380 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
SYNGAP1-208ENST00000629380 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.331e-7■■■■■ 66.8
SYNGAP1-208ENST00000629380 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
SYNGAP1-208ENST00000629380 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
SYNGAP1-208ENST00000629380 CLIP1P30622 1438 aa17.07■□□□□ 0.32
SYNGAP1-208ENST00000629380 CDCA8Q53HL2 280 aa17.07■□□□□ 0.32
SYNGAP1-208ENST00000629380 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
SYNGAP1-208ENST00000629380 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
SYNGAP1-208ENST00000629380 DDX10Q13206 875 aaKnown RBP17.05■□□□□ 0.32
SYNGAP1-208ENST00000629380 KIAA2012Q0VF49 1180 aa17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 TULP1O00294 542 aaPredicted RBP17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 NPHP1O15259 732 aa17.03■□□□□ 0.32
SYNGAP1-208ENST00000629380 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-208ENST00000629380 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-208ENST00000629380 FGD1P98174 961 aa17.02■□□□□ 0.31
SYNGAP1-208ENST00000629380 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
SYNGAP1-208ENST00000629380 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
SYNGAP1-208ENST00000629380 MS4A1P11836 297 aa16.99■□□□□ 0.31
SYNGAP1-208ENST00000629380 CLSTN1O94985 981 aa16.98■□□□□ 0.31
SYNGAP1-208ENST00000629380 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
SYNGAP1-208ENST00000629380 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
SYNGAP1-208ENST00000629380 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
SYNGAP1-208ENST00000629380 CFDP1Q9UEE9 299 aaPredicted RBP16.96■□□□□ 0.31
SYNGAP1-208ENST00000629380 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
SYNGAP1-208ENST00000629380 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
SYNGAP1-208ENST00000629380 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
SYNGAP1-208ENST00000629380 KANK1Q14678 1352 aa16.95■□□□□ 0.3
SYNGAP1-208ENST00000629380 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
SYNGAP1-208ENST00000629380 NOC3LQ8WTT2 800 aaKnown RBP16.94■□□□□ 0.3
SYNGAP1-208ENST00000629380 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
SYNGAP1-208ENST00000629380 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.31e-7■■■■■ 32.2
SYNGAP1-208ENST00000629380 KCNJ4P48050 445 aa16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 OS9Q13438 667 aaPredicted RBP16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 MAPK8IP3Q9UPT6 1336 aa16.93■□□□□ 0.3
SYNGAP1-208ENST00000629380 PNNQ9H307 717 aaKnown RBP16.92■□□□□ 0.3
SYNGAP1-208ENST00000629380 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
SYNGAP1-208ENST00000629380 MCCP23508 829 aa16.92■□□□□ 0.3
SYNGAP1-208ENST00000629380 PTMSP20962 102 aa16.92■□□□□ 0.3
SYNGAP1-208ENST00000629380 MSNP26038 577 aaKnown RBP16.91■□□□□ 0.3
SYNGAP1-208ENST00000629380 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
SYNGAP1-208ENST00000629380 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
SYNGAP1-208ENST00000629380 HSCBQ8IWL3 235 aa16.88■□□□□ 0.29
SYNGAP1-208ENST00000629380 GNL2Q13823 731 aaKnown RBP16.87■□□□□ 0.29
SYNGAP1-208ENST00000629380 DRC7Q8IY82 874 aa16.87■□□□□ 0.29
SYNGAP1-208ENST00000629380 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
SYNGAP1-208ENST00000629380 NUDCQ9Y266 331 aa16.84■□□□□ 0.29
SYNGAP1-208ENST00000629380 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
SYNGAP1-208ENST00000629380 PLCB2Q00722 1185 aa16.84■□□□□ 0.29
SYNGAP1-208ENST00000629380 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-208ENST00000629380 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
SYNGAP1-208ENST00000629380 CUX2O14529 1486 aa16.81■□□□□ 0.28
SYNGAP1-208ENST00000629380 IRX6P78412 446 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-208ENST00000629380 NOP58Q9Y2X3 529 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-208ENST00000629380 GOLGA6L1Q8N7Z2 621 aa16.78■□□□□ 0.28
SYNGAP1-208ENST00000629380 CCDC34Q96HJ3 373 aa16.78■□□□□ 0.28
SYNGAP1-208ENST00000629380 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
SYNGAP1-208ENST00000629380 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
SYNGAP1-208ENST00000629380 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
SYNGAP1-208ENST00000629380 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
SYNGAP1-208ENST00000629380 CEP162Q5TB80 1403 aa16.75■□□□□ 0.27
SYNGAP1-208ENST00000629380 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
SYNGAP1-208ENST00000629380 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
SYNGAP1-208ENST00000629380 POGKQ9P215 609 aa16.73■□□□□ 0.27
SYNGAP1-208ENST00000629380 LAS1LQ9Y4W2 734 aaKnown RBP16.73■□□□□ 0.27
SYNGAP1-208ENST00000629380 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
SYNGAP1-208ENST00000629380 TPM4P67936 248 aa16.72■□□□□ 0.27
SYNGAP1-208ENST00000629380 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
SYNGAP1-208ENST00000629380 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
SYNGAP1-208ENST00000629380 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms