RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 C14orf37Q86TY3 774 aa7.45□□□□□ -1.22
CHD2-204ENST00000625463 CDK11AQ9UQ88 783 aaPredicted RBP7.45□□□□□ -1.22
CHD2-204ENST00000625463 BCL11BQ9C0K0 894 aaPredicted RBP7.44□□□□□ -1.22
CHD2-204ENST00000625463 ZBTB12Q9Y330 459 aaPredicted RBP7.43□□□□□ -1.22
CHD2-204ENST00000625463 AAMPQ13685 434 aa7.41□□□□□ -1.22
CHD2-204ENST00000625463 CHMP4AQ9BY43 222 aa7.41□□□□□ -1.22
CHD2-204ENST00000625463 CCDC180Q9P1Z9 1646 aa7.41□□□□□ -1.22
CHD2-204ENST00000625463 BCANQ96GW7 911 aa7.4□□□□□ -1.22
CHD2-204ENST00000625463 CCDC136Q96JN2 1154 aa7.39□□□□□ -1.23
CHD2-204ENST00000625463 TSHZ2Q9NRE2 1034 aa7.39□□□□□ -1.23
CHD2-204ENST00000625463 RSPH4AQ5TD94 716 aa7.38□□□□□ -1.23
CHD2-204ENST00000625463 OSCARQ8IYS5 282 aa7.38□□□□□ -1.23
CHD2-204ENST00000625463 HSP90B1P14625 803 aaKnown RBP7.37□□□□□ -1.23
CHD2-204ENST00000625463 CDK11BP21127 795 aaKnown RBP7.37□□□□□ -1.23
CHD2-204ENST00000625463 CACNB1Q02641 598 aaPredicted RBP7.37□□□□□ -1.23
CHD2-204ENST00000625463 TPRNQ4KMQ1 711 aa7.37□□□□□ -1.23
CHD2-204ENST00000625463 RSPH6AQ9H0K4 717 aa7.37□□□□□ -1.23
CHD2-204ENST00000625463 VASPP50552 380 aaPredicted RBP7.35□□□□□ -1.23
CHD2-204ENST00000625463 DEKP35659 375 aaKnown RBP7.34□□□□□ -1.23
CHD2-204ENST00000625463 RBM10P98175 930 aaKnown RBP7.34□□□□□ -1.23
CHD2-204ENST00000625463 ZNF692Q9BU19 519 aaPredicted RBP7.33□□□□□ -1.24
CHD2-204ENST00000625463 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
CHD2-204ENST00000625463 A0A0U1RQG5 324 aaPredicted RBP7.32□□□□□ -1.24
CHD2-204ENST00000625463 HAP1P54257 671 aaPredicted RBP7.32□□□□□ -1.24
CHD2-204ENST00000625463 ZMYND15Q9H091 742 aa7.32□□□□□ -1.24
CHD2-204ENST00000625463 BCCIPQ9P287 314 aaKnown RBP eCLIP7.32□□□□□ -1.24
CHD2-204ENST00000625463 IFNLR1Q8IU57 520 aaPredicted RBP7.3□□□□□ -1.24
CHD2-204ENST00000625463 NAP1L5Q96NT1 182 aaPredicted RBP7.3□□□□□ -1.24
CHD2-204ENST00000625463 SSUH2Q9Y2M2 353 aa7.3□□□□□ -1.24
CHD2-204ENST00000625463 SPDYE2BA6NHP3 402 aa7.29□□□□□ -1.24
CHD2-204ENST00000625463 SPDYE6P0CI01 402 aa7.29□□□□□ -1.24
CHD2-204ENST00000625463 SPDYE2Q495Y8 402 aa7.29□□□□□ -1.24
CHD2-204ENST00000625463 DHX37Q8IY37 1157 aaKnown RBP7.29□□□□□ -1.24
CHD2-204ENST00000625463 LOC105371045A0A1W2PR82 267 aa7.28□□□□□ -1.24
CHD2-204ENST00000625463 HMGB1P09429 215 aaKnown RBP7.28□□□□□ -1.24
CHD2-204ENST00000625463 YTHDC1Q96MU7 727 aaKnown RBP7.28□□□□□ -1.24
CHD2-204ENST00000625463 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.27□□□□□ -1.25
CHD2-204ENST00000625463 TRIM26Q12899 539 aaPredicted RBP7.26□□□□□ -1.25
CHD2-204ENST00000625463 PABPN1Q86U42 306 aaKnown RBP eCLIP7.26□□□□□ -1.25
CHD2-204ENST00000625463 VSIG10Q8N0Z9 540 aa7.25□□□□□ -1.25
CHD2-204ENST00000625463 CCER1Q8TC90 406 aaPredicted RBP7.24□□□□□ -1.25
CHD2-204ENST00000625463 DIEXFQ68CQ4 756 aaKnown RBP7.22□□□□□ -1.25
CHD2-204ENST00000625463 PAXIP1Q6ZW49 1069 aaPredicted RBP7.22□□□□□ -1.25
CHD2-204ENST00000625463 TMEM132AQ24JP5 1023 aa7.2□□□□□ -1.26
CHD2-204ENST00000625463 FANCIQ9NVI1 1328 aa7.2□□□□□ -1.26
CHD2-204ENST00000625463 SUPT16HQ9Y5B9 1047 aaKnown RBP7.19□□□□□ -1.26
CHD2-204ENST00000625463 SHROOM4Q9ULL8 1493 aa7.17□□□□□ -1.26
CHD2-204ENST00000625463 MYO15BQ96JP2 1530 aa7.17□□□□□ -1.26
CHD2-204ENST00000625463 IPO4Q8TEX9 1081 aaKnown RBP7.17□□□□□ -1.26
CHD2-204ENST00000625463 STAG3Q9UJ98 1225 aa7.17□□□□□ -1.26
CHD2-204ENST00000625463 NAP1L2Q9ULW6 460 aaPredicted RBP7.17□□□□□ -1.26
CHD2-204ENST00000625463 PKD2Q13563 968 aa7.16□□□□□ -1.26
CHD2-204ENST00000625463 RBM19Q9Y4C8 960 aaKnown RBP7.15□□□□□ -1.26
CHD2-204ENST00000625463 PLCD3Q8N3E9 789 aa7.14□□□□□ -1.27
CHD2-204ENST00000625463 ARID3AQ99856 593 aa7.14□□□□□ -1.27
CHD2-204ENST00000625463 TEX2Q8IWB9 1127 aa7.13□□□□□ -1.27
CHD2-204ENST00000625463 MIER1Q8N108 512 aa7.13□□□□□ -1.27
CHD2-204ENST00000625463 POLR3GLQ9BT43 218 aa7.13□□□□□ -1.27
CHD2-204ENST00000625463 SPOCK2Q92563 424 aa7.12□□□□□ -1.27
CHD2-204ENST00000625463 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
CHD2-204ENST00000625463 NCLP19338 710 aaKnown RBP7.11□□□□□ -1.27
CHD2-204ENST00000625463 C11orf95C9JLR9 678 aaPredicted RBP7.1□□□□□ -1.27
CHD2-204ENST00000625463 RRP9O43818 475 aaKnown RBP7.1□□□□□ -1.27
CHD2-204ENST00000625463 CHRM1P11229 460 aaPredicted RBP7.09□□□□□ -1.27
CHD2-204ENST00000625463 RTL5Q5HYW3 569 aaPredicted RBP7.08□□□□□ -1.28
CHD2-204ENST00000625463 TICAM2Q86XR7 235 aa7.08□□□□□ -1.28
CHD2-204ENST00000625463 FTSJ3Q8IY81 847 aaKnown RBP7.08□□□□□ -1.28
CHD2-204ENST00000625463 IL27Q8NEV9 243 aa7.08□□□□□ -1.28
CHD2-204ENST00000625463 ARID4BQ4LE39 1312 aaPredicted RBP7.07□□□□□ -1.28
CHD2-204ENST00000625463 PLCB2Q00722 1185 aa7.07□□□□□ -1.28
CHD2-204ENST00000625463 CANXP27824 592 aaKnown RBP7.06□□□□□ -1.28
CHD2-204ENST00000625463 CNGB1Q14028 1251 aaPredicted RBP7.06□□□□□ -1.28
CHD2-204ENST00000625463 BBXQ8WY36 941 aaPredicted RBP7.06□□□□□ -1.28
CHD2-204ENST00000625463 AKT1S1Q96B36 256 aa7.05□□□□□ -1.28
CHD2-204ENST00000625463 ZFP91Q96JP5 570 aaPredicted RBP7.05□□□□□ -1.28
CHD2-204ENST00000625463 RBM42Q9BTD8 480 aaKnown RBP7.05□□□□□ -1.28
CHD2-204ENST00000625463 CLSTN1O94985 981 aa7.04□□□□□ -1.28
CHD2-204ENST00000625463 ECM2O94769 699 aaPredicted RBP7.03□□□□□ -1.28
CHD2-204ENST00000625463 CALD1Q05682 793 aaKnown RBP7.03□□□□□ -1.28
CHD2-204ENST00000625463 HSP90AA2PQ14568 343 aaPredicted RBP7.03□□□□□ -1.28
CHD2-204ENST00000625463 PUS7Q96PZ0 661 aaKnown RBP7.03□□□□□ -1.28
CHD2-204ENST00000625463 SUPT5HO00267 1087 aaKnown RBP7.02□□□□□ -1.29
CHD2-204ENST00000625463 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.02□□□□□ -1.29
CHD2-204ENST00000625463 REM2Q8IYK8 340 aaPredicted RBP7.02□□□□□ -1.29
CHD2-204ENST00000625463 SPDYE1Q8NFV5 336 aaPredicted RBP7.02□□□□□ -1.29
CHD2-204ENST00000625463 TRIM41Q8WV44 630 aa7.02□□□□□ -1.29
CHD2-204ENST00000625463 CLEC11AQ9Y240 323 aa7.02□□□□□ -1.29
CHD2-204ENST00000625463 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.02□□□□□ -1.29
CHD2-204ENST00000625463 CHMP4BQ9H444 224 aaKnown RBP7.01□□□□□ -1.29
CHD2-204ENST00000625463 RGL2O15211 777 aa7□□□□□ -1.29
CHD2-204ENST00000625463 VGFO15240 615 aaPredicted RBP7□□□□□ -1.29
CHD2-204ENST00000625463 PTMAP06454 111 aaKnown RBP7□□□□□ -1.29
CHD2-204ENST00000625463 NEFMP07197 916 aa7□□□□□ -1.29
CHD2-204ENST00000625463 PTMSP20962 102 aa7□□□□□ -1.29
CHD2-204ENST00000625463 CENPJQ9HC77 1338 aaPredicted RBP7□□□□□ -1.29
CHD2-204ENST00000625463 IRX6P78412 446 aaPredicted RBP6.99□□□□□ -1.29
CHD2-204ENST00000625463 FAM43AQ8N2R8 423 aa6.99□□□□□ -1.29
CHD2-204ENST00000625463 SECISBP2LQ93073 1101 aaKnown RBP6.99□□□□□ -1.29
CHD2-204ENST00000625463 CIZ1Q9ULV3 898 aaPredicted RBP6.99□□□□□ -1.29
CHD2-204ENST00000625463 UBTFP17480 764 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms