RNA–Protein interactions for RNA: ENST00000623788.1

ERCC6-212, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 4

Gene ERCC6, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-212ENST00000623788 PLEKHG5O94827 1062 aa11.35□□□□□ -0.59
ERCC6-212ENST00000623788 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
ERCC6-212ENST00000623788 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
ERCC6-212ENST00000623788 C7P10643 843 aa11.33□□□□□ -0.6
ERCC6-212ENST00000623788 POTEB2H3BUK9 544 aa11.32□□□□□ -0.6
ERCC6-212ENST00000623788 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
ERCC6-212ENST00000623788 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
ERCC6-212ENST00000623788 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
ERCC6-212ENST00000623788 SPOCK2Q92563 424 aa11.31□□□□□ -0.6
ERCC6-212ENST00000623788 TSPYL2Q9H2G4 693 aaPredicted RBP11.31□□□□□ -0.6
ERCC6-212ENST00000623788 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
ERCC6-212ENST00000623788 MIER1Q8N108 512 aa11.3□□□□□ -0.6
ERCC6-212ENST00000623788 METRNQ9UJH8 293 aa11.3□□□□□ -0.6
ERCC6-212ENST00000623788 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
ERCC6-212ENST00000623788 MAMSTRQ6ZN01 415 aa11.28□□□□□ -0.6
ERCC6-212ENST00000623788 PKD2Q13563 968 aa11.26□□□□□ -0.61
ERCC6-212ENST00000623788 KLHL34Q8N239 644 aa11.26□□□□□ -0.61
ERCC6-212ENST00000623788 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
ERCC6-212ENST00000623788 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
ERCC6-212ENST00000623788 POTEMA6NI47 508 aa11.22□□□□□ -0.61
ERCC6-212ENST00000623788 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
ERCC6-212ENST00000623788 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
ERCC6-212ENST00000623788 ATN1P54259 1190 aaPredicted RBP11.17□□□□□ -0.62
ERCC6-212ENST00000623788 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
ERCC6-212ENST00000623788 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
ERCC6-212ENST00000623788 TIE1P35590 1138 aa11.13□□□□□ -0.63
ERCC6-212ENST00000623788 MAP3K13O43283 966 aa11.11□□□□□ -0.63
ERCC6-212ENST00000623788 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
ERCC6-212ENST00000623788 NUBP1P53384 320 aa11.1□□□□□ -0.63
ERCC6-212ENST00000623788 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
ERCC6-212ENST00000623788 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
ERCC6-212ENST00000623788 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
ERCC6-212ENST00000623788 SEC24BO95487 1268 aa11.07□□□□□ -0.64
ERCC6-212ENST00000623788 SGIP1Q9BQI5 828 aa11.07□□□□□ -0.64
ERCC6-212ENST00000623788 ECM2O94769 699 aaPredicted RBP11.06□□□□□ -0.64
ERCC6-212ENST00000623788 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
ERCC6-212ENST00000623788 TRIM41Q8WV44 630 aa11.05□□□□□ -0.64
ERCC6-212ENST00000623788 TRPC6Q9Y210 931 aa11.02□□□□□ -0.65
ERCC6-212ENST00000623788 TTLL13PA6NNM8 815 aa11.01□□□□□ -0.65
ERCC6-212ENST00000623788 GSE1Q14687 1217 aa11.01□□□□□ -0.65
ERCC6-212ENST00000623788 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
ERCC6-212ENST00000623788 IER5LQ5T953 404 aa11□□□□□ -0.65
ERCC6-212ENST00000623788 CIZ1Q9ULV3 898 aaPredicted RBP11□□□□□ -0.65
ERCC6-212ENST00000623788 POTEFA5A3E0 1075 aa10.99□□□□□ -0.65
ERCC6-212ENST00000623788 RGL2O15211 777 aa10.98□□□□□ -0.65
ERCC6-212ENST00000623788 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
ERCC6-212ENST00000623788 FAM212AQ96EL1 285 aa10.96□□□□□ -0.65
ERCC6-212ENST00000623788 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
ERCC6-212ENST00000623788 CHRM1P11229 460 aaPredicted RBP10.91□□□□□ -0.66
ERCC6-212ENST00000623788 LCE2DQ5TA82 110 aaPredicted RBP10.91□□□□□ -0.66
ERCC6-212ENST00000623788 DCAF8L2P0C7V8 631 aa10.9□□□□□ -0.66
ERCC6-212ENST00000623788 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
ERCC6-212ENST00000623788 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
ERCC6-212ENST00000623788 IFNL1Q8IU54 200 aa10.89□□□□□ -0.67
ERCC6-212ENST00000623788 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
ERCC6-212ENST00000623788 TMEM106CQ9BVX2 250 aa10.89□□□□□ -0.67
ERCC6-212ENST00000623788 PLCG2P16885 1265 aa10.87□□□□□ -0.67
ERCC6-212ENST00000623788 SLAIN1Q8ND83 568 aa10.85□□□□□ -0.67
ERCC6-212ENST00000623788 BBXQ8WY36 941 aaPredicted RBP10.85□□□□□ -0.67
ERCC6-212ENST00000623788 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
ERCC6-212ENST00000623788 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
ERCC6-212ENST00000623788 HS6ST3Q8IZP7 471 aa10.8□□□□□ -0.68
ERCC6-212ENST00000623788 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
ERCC6-212ENST00000623788 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
ERCC6-212ENST00000623788 TAOK2Q9UL54 1235 aa10.77□□□□□ -0.69
ERCC6-212ENST00000623788 IRX5P78411 483 aaPredicted RBP10.76□□□□□ -0.69
ERCC6-212ENST00000623788 CHGAP10645 457 aaKnown RBP10.75□□□□□ -0.69
ERCC6-212ENST00000623788 PYGBP11216 843 aa10.75□□□□□ -0.69
ERCC6-212ENST00000623788 SNPHO15079 494 aa10.74□□□□□ -0.69
ERCC6-212ENST00000623788 VGFO15240 615 aaPredicted RBP10.74□□□□□ -0.69
ERCC6-212ENST00000623788 ST18O60284 1047 aa10.74□□□□□ -0.69
ERCC6-212ENST00000623788 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
ERCC6-212ENST00000623788 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.72□□□□□ -0.69
ERCC6-212ENST00000623788 TMEM121BQ9BXQ6 578 aaPredicted RBP10.7□□□□□ -0.7
ERCC6-212ENST00000623788 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
ERCC6-212ENST00000623788 ZNF467Q7Z7K2 595 aaPredicted RBP10.67□□□□□ -0.7
ERCC6-212ENST00000623788 PCDHB8Q9UN66 801 aa10.67□□□□□ -0.7
ERCC6-212ENST00000623788 MKRN3Q13064 507 aaKnown RBP10.65□□□□□ -0.7
ERCC6-212ENST00000623788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
ERCC6-212ENST00000623788 PAXIP1Q6ZW49 1069 aaPredicted RBP10.64□□□□□ -0.71
ERCC6-212ENST00000623788 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
ERCC6-212ENST00000623788 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
ERCC6-212ENST00000623788 L3MBTL3Q96JM7 780 aaPredicted RBP10.63□□□□□ -0.71
ERCC6-212ENST00000623788 STK25O00506 426 aa10.62□□□□□ -0.71
ERCC6-212ENST00000623788 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
ERCC6-212ENST00000623788 NKX1-1Q15270 411 aaPredicted RBP10.62□□□□□ -0.71
ERCC6-212ENST00000623788 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
ERCC6-212ENST00000623788 PDAP1Q13442 181 aaKnown RBP10.59□□□□□ -0.71
ERCC6-212ENST00000623788 CFAP44Q96MT7 982 aa10.59□□□□□ -0.71
ERCC6-212ENST00000623788 BCL11BQ9C0K0 894 aaPredicted RBP10.59□□□□□ -0.71
ERCC6-212ENST00000623788 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
ERCC6-212ENST00000623788 STK24Q9Y6E0 443 aa10.56□□□□□ -0.72
ERCC6-212ENST00000623788 GTPBP6O43824 516 aaPredicted RBP10.55□□□□□ -0.72
ERCC6-212ENST00000623788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.72
ERCC6-212ENST00000623788 PSEN1P49768 467 aa10.54□□□□□ -0.72
ERCC6-212ENST00000623788 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
ERCC6-212ENST00000623788 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
ERCC6-212ENST00000623788 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
ERCC6-212ENST00000623788 SPNS2Q8IVW8 549 aa10.51□□□□□ -0.73
ERCC6-212ENST00000623788 RYDENQ9NUL5 291 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms