RNA–Protein interactions for RNA: ENST00000620859.4

LINC01515-217, Transcript of long intergenic non-protein coding RNA 1515, human

TSL 5 BASIC

Gene LINC01515, Length 694 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01515-217	ENST00000620859	MS4A3	Q96HJ5	214 aa		12.6	□□□□□ -0.39
LINC01515-217	ENST00000620859	FBXO3	Q9UK99	471 aa		12.6	□□□□□ -0.39
LINC01515-217	ENST00000620859	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.59	□□□□□ -0.39
LINC01515-217	ENST00000620859	NUBP1	P53384	320 aa		12.56	□□□□□ -0.4
LINC01515-217	ENST00000620859	KIF12	Q96FN5	646 aa		12.55	□□□□□ -0.4
LINC01515-217	ENST00000620859	PELP1	Q8IZL8	1130 aa	Known RBP	12.49	□□□□□ -0.41
LINC01515-217	ENST00000620859	MAP3K13	O43283	966 aa		12.48	□□□□□ -0.41
LINC01515-217	ENST00000620859	ASTL	Q6HA08	431 aa	Predicted RBP	12.48	□□□□□ -0.41
LINC01515-217	ENST00000620859	VASP	P50552	380 aa	Predicted RBP	12.47	□□□□□ -0.41
LINC01515-217	ENST00000620859	ATMIN	O43313	823 aa	Predicted RBP	12.46	□□□□□ -0.41
LINC01515-217	ENST00000620859	FAM212A	Q96EL1	285 aa		12.43	□□□□□ -0.42
LINC01515-217	ENST00000620859	TRPC6	Q9Y210	931 aa		12.42	□□□□□ -0.42
LINC01515-217	ENST00000620859	SGIP1	Q9BQI5	828 aa		12.39	□□□□□ -0.43
LINC01515-217	ENST00000620859	ATN1	P54259	1190 aa	Predicted RBP	12.38	□□□□□ -0.43
LINC01515-217	ENST00000620859	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.38	□□□□□ -0.43
LINC01515-217	ENST00000620859	POTEB2	H3BUK9	544 aa		12.37	□□□□□ -0.43
LINC01515-217	ENST00000620859	TIE1	P35590	1138 aa		12.36	□□□□□ -0.43
LINC01515-217	ENST00000620859	SLC39A7	Q92504	469 aa		12.36	□□□□□ -0.43
LINC01515-217	ENST00000620859	PCDHB13	Q9Y5F0	798 aa		12.36	□□□□□ -0.43
LINC01515-217	ENST00000620859	C7	P10643	843 aa		12.35	□□□□□ -0.43
LINC01515-217	ENST00000620859	METRN	Q9UJH8	293 aa		12.35	□□□□□ -0.43
LINC01515-217	ENST00000620859	DCAF8	Q5TAQ9	597 aa		12.34	□□□□□ -0.43
LINC01515-217	ENST00000620859	KLHL34	Q8N239	644 aa		12.34	□□□□□ -0.43
LINC01515-217	ENST00000620859	IFNL1	Q8IU54	200 aa		12.31	□□□□□ -0.44
LINC01515-217	ENST00000620859	TTLL13P	A6NNM8	815 aa		12.3	□□□□□ -0.44
LINC01515-217	ENST00000620859	OTUD5	Q96G74	571 aa		12.28	□□□□□ -0.44
LINC01515-217	ENST00000620859	PYGB	P11216	843 aa		12.27	□□□□□ -0.45
LINC01515-217	ENST00000620859	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.27	□□□□□ -0.45
LINC01515-217	ENST00000620859	GSE1	Q14687	1217 aa		12.24	□□□□□ -0.45
LINC01515-217	ENST00000620859	POTEF	A5A3E0	1075 aa		12.23	□□□□□ -0.45
LINC01515-217	ENST00000620859	POTEJ	P0CG39	1038 aa		12.23	□□□□□ -0.45
LINC01515-217	ENST00000620859	TRIM35	Q9UPQ4	493 aa		12.21	□□□□□ -0.45
LINC01515-217	ENST00000620859	SPOCK2	Q92563	424 aa		12.19	□□□□□ -0.46
LINC01515-217	ENST00000620859	TMEM106C	Q9BVX2	250 aa		12.19	□□□□□ -0.46
LINC01515-217	ENST00000620859	PCDHB8	Q9UN66	801 aa		12.17	□□□□□ -0.46
LINC01515-217	ENST00000620859	CHRM1	P11229	460 aa	Predicted RBP	12.16	□□□□□ -0.46
LINC01515-217	ENST00000620859	IER5L	Q5T953	404 aa		12.16	□□□□□ -0.46
LINC01515-217	ENST00000620859	COLQ	Q9Y215	455 aa	Predicted RBP	12.16	□□□□□ -0.46
LINC01515-217	ENST00000620859	SEC24B	O95487	1268 aa		12.12	□□□□□ -0.47
LINC01515-217	ENST00000620859	MAMSTR	Q6ZN01	415 aa		12.12	□□□□□ -0.47
LINC01515-217	ENST00000620859	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.1	□□□□□ -0.47
LINC01515-217	ENST00000620859	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.07	□□□□□ -0.48
LINC01515-217	ENST00000620859	SCUBE2	Q9NQ36	999 aa		12.06	□□□□□ -0.48
LINC01515-217	ENST00000620859	IRX5	P78411	483 aa	Predicted RBP	12.05	□□□□□ -0.48
LINC01515-217	ENST00000620859	PLCG2	P16885	1265 aa		12.01	□□□□□ -0.49
LINC01515-217	ENST00000620859	PSEN1	P49768	467 aa		11.99	□□□□□ -0.49
LINC01515-217	ENST00000620859	OCEL1	Q9H607	264 aa		11.98	□□□□□ -0.49
LINC01515-217	ENST00000620859	PDAP1	Q13442	181 aa	Known RBP	11.96	□□□□□ -0.49
LINC01515-217	ENST00000620859	TRIM41	Q8WV44	630 aa		11.94	□□□□□ -0.5
LINC01515-217	ENST00000620859	GOLGA2	Q08379	1002 aa		11.9	□□□□□ -0.5
LINC01515-217	ENST00000620859	MKRN3	Q13064	507 aa	Known RBP	11.9	□□□□□ -0.5
LINC01515-217	ENST00000620859	PDCD7	Q8N8D1	485 aa	Known RBP	11.9	□□□□□ -0.5
LINC01515-217	ENST00000620859	LCE2D	Q5TA82	110 aa	Predicted RBP	11.87	□□□□□ -0.51
LINC01515-217	ENST00000620859	POTEM	A6NI47	508 aa		11.85	□□□□□ -0.51
LINC01515-217	ENST00000620859	ILDR1	Q86SU0	546 aa	Predicted RBP	11.85	□□□□□ -0.51
LINC01515-217	ENST00000620859	SLAIN1	Q8ND83	568 aa		11.85	□□□□□ -0.51
LINC01515-217	ENST00000620859	FAM163A	Q96GL9	167 aa	Predicted RBP	11.84	□□□□□ -0.51
LINC01515-217	ENST00000620859	CABP2	Q9NPB3	220 aa		11.84	□□□□□ -0.51
LINC01515-217	ENST00000620859	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
LINC01515-217	ENST00000620859	POTEG	Q6S5H5	508 aa		11.83	□□□□□ -0.52
LINC01515-217	ENST00000620859	RNF25	Q96BH1	459 aa	Predicted RBP	11.82	□□□□□ -0.52
LINC01515-217	ENST00000620859	RIOK3	O14730	519 aa	Known RBP	11.79	□□□□□ -0.52
LINC01515-217	ENST00000620859	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.78	□□□□□ -0.52
LINC01515-217	ENST00000620859	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.77	□□□□□ -0.53
LINC01515-217	ENST00000620859	DPY19L2	Q6NUT2	758 aa		11.75	□□□□□ -0.53
LINC01515-217	ENST00000620859	EFCAB3	Q8N7B9	438 aa		11.73	□□□□□ -0.53
LINC01515-217	ENST00000620859	VGF	O15240	615 aa	Predicted RBP	11.72	□□□□□ -0.53
LINC01515-217	ENST00000620859	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.71	□□□□□ -0.53
LINC01515-217	ENST00000620859	C3orf67	Q6ZVT6	689 aa		11.71	□□□□□ -0.53
LINC01515-217	ENST00000620859	ZFP91	Q96JP5	570 aa	Predicted RBP	11.71	□□□□□ -0.53
LINC01515-217	ENST00000620859	ST18	O60284	1047 aa		11.68	□□□□□ -0.54
LINC01515-217	ENST00000620859	PCDH10	Q9P2E7	1040 aa		11.67	□□□□□ -0.54
LINC01515-217	ENST00000620859	BOLA1	Q9Y3E2	137 aa		11.66	□□□□□ -0.54
LINC01515-217	ENST00000620859	SNPH	O15079	494 aa		11.64	□□□□□ -0.55
LINC01515-217	ENST00000620859	PKD2	Q13563	968 aa		11.64	□□□□□ -0.55
LINC01515-217	ENST00000620859	SOX12	O15370	315 aa		11.63	□□□□□ -0.55
LINC01515-217	ENST00000620859	ECM2	O94769	699 aa	Predicted RBP	11.63	□□□□□ -0.55
LINC01515-217	ENST00000620859	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.62	□□□□□ -0.55
LINC01515-217	ENST00000620859	PLSCR2	Q9NRY7	297 aa		11.61	□□□□□ -0.55
LINC01515-217	ENST00000620859		G3V3G9	751 aa		11.6	□□□□□ -0.55
LINC01515-217	ENST00000620859	TAOK2	Q9UL54	1235 aa		11.6	□□□□□ -0.55
LINC01515-217	ENST00000620859	MS4A4A	Q96JQ5	239 aa		11.59	□□□□□ -0.55
LINC01515-217	ENST00000620859	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.58	□□□□□ -0.56
LINC01515-217	ENST00000620859	PHF8	Q9UPP1	1060 aa		11.58	□□□□□ -0.56
LINC01515-217	ENST00000620859	RGL2	O15211	777 aa		11.56	□□□□□ -0.56
LINC01515-217	ENST00000620859	STK24	Q9Y6E0	443 aa		11.54	□□□□□ -0.56
LINC01515-217	ENST00000620859	MICALL2	Q8IY33	904 aa		11.53	□□□□□ -0.56
LINC01515-217	ENST00000620859	STK25	O00506	426 aa		11.52	□□□□□ -0.57
LINC01515-217	ENST00000620859	CDAN1	Q8IWY9	1227 aa		11.52	□□□□□ -0.57
LINC01515-217	ENST00000620859	FBXO22	Q8NEZ5	403 aa		11.51	□□□□□ -0.57
LINC01515-217	ENST00000620859	NLRP6	P59044	892 aa		11.5	□□□□□ -0.57
LINC01515-217	ENST00000620859	HOXB3	P14651	431 aa	Predicted RBP	11.49	□□□□□ -0.57
LINC01515-217	ENST00000620859	MARVELD3	Q96A59	401 aa		11.49	□□□□□ -0.57
LINC01515-217	ENST00000620859	MFRP	Q9BY79	579 aa		11.48	□□□□□ -0.57
LINC01515-217	ENST00000620859	TMEM92	Q6UXU6	159 aa		11.47	□□□□□ -0.57
LINC01515-217	ENST00000620859	EMP3	P54852	163 aa		11.41	□□□□□ -0.58
LINC01515-217	ENST00000620859	DOK7	Q18PE1	504 aa		11.39	□□□□□ -0.59
LINC01515-217	ENST00000620859	POTEB3	A0JP26	581 aa		11.37	□□□□□ -0.59
LINC01515-217	ENST00000620859	HOXB1	P14653	301 aa	Predicted RBP	11.37	□□□□□ -0.59
LINC01515-217	ENST00000620859	POTEB	Q6S5H4	581 aa		11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms