RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 TSPYL2Q9H2G4 693 aaPredicted RBP9.07□□□□□ -0.96
MALAT1-216ENST00000620465 PAK3O75914 559 aaPredicted RBP9.05□□□□□ -0.96
MALAT1-216ENST00000620465 CHRM1P11229 460 aaPredicted RBP9.05□□□□□ -0.96
MALAT1-216ENST00000620465 RNF25Q96BH1 459 aaPredicted RBP9.04□□□□□ -0.96
MALAT1-216ENST00000620465 RIOK3O14730 519 aaKnown RBP9.03□□□□□ -0.96
MALAT1-216ENST00000620465 PYGBP11216 843 aa9.03□□□□□ -0.96
MALAT1-216ENST00000620465 TAOK2Q9UL54 1235 aa9.02□□□□□ -0.97
MALAT1-216ENST00000620465 SLC24A1O60721 1099 aa9.01□□□□□ -0.97
MALAT1-216ENST00000620465 CCDC61Q9Y6R9 512 aa8.99□□□□□ -0.97
MALAT1-216ENST00000620465 CHGAP10645 457 aaKnown RBP8.98□□□□□ -0.97
MALAT1-216ENST00000620465 VGFO15240 615 aaPredicted RBP8.97□□□□□ -0.97
MALAT1-216ENST00000620465 CD44P16070 742 aaKnown RBP8.97□□□□□ -0.97
MALAT1-216ENST00000620465 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
MALAT1-216ENST00000620465 BBXQ8WY36 941 aaPredicted RBP8.96□□□□□ -0.98
MALAT1-216ENST00000620465 ZNF467Q7Z7K2 595 aaPredicted RBP8.95□□□□□ -0.98
MALAT1-216ENST00000620465 PLCB2Q00722 1185 aa8.94□□□□□ -0.98
MALAT1-216ENST00000620465 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.94□□□□□ -0.98
MALAT1-216ENST00000620465 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
MALAT1-216ENST00000620465 C19orf67A6NJJ6 358 aa8.91□□□□□ -0.98
MALAT1-216ENST00000620465 STK25O00506 426 aa8.91□□□□□ -0.98
MALAT1-216ENST00000620465 SGIP1Q9BQI5 828 aa8.91□□□□□ -0.98
MALAT1-216ENST00000620465 ZNF579Q8NAF0 562 aaKnown RBP8.9□□□□□ -0.98
MALAT1-216ENST00000620465 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.89□□□□□ -0.99
MALAT1-216ENST00000620465 KIF12Q96FN5 646 aa8.89□□□□□ -0.99
MALAT1-216ENST00000620465 ZFP91Q96JP5 570 aaPredicted RBP8.89□□□□□ -0.99
MALAT1-216ENST00000620465 PCDHB13Q9Y5F0 798 aa8.89□□□□□ -0.99
MALAT1-216ENST00000620465 PCDHB8Q9UN66 801 aa8.88□□□□□ -0.99
MALAT1-216ENST00000620465 MAP3K13O43283 966 aa8.87□□□□□ -0.99
MALAT1-216ENST00000620465 PDAP1Q13442 181 aaKnown RBP8.87□□□□□ -0.99
MALAT1-216ENST00000620465 PHF12Q96QT6 1004 aa8.87□□□□□ -0.99
MALAT1-216ENST00000620465 DNAJC5Q9H3Z4 198 aa8.87□□□□□ -0.99
MALAT1-216ENST00000620465 BCL11BQ9C0K0 894 aaPredicted RBP8.86□□□□□ -0.99
MALAT1-216ENST00000620465 IFNL1Q8IU54 200 aa8.85□□□□□ -0.99
MALAT1-216ENST00000620465 STK24Q9Y6E0 443 aa8.85□□□□□ -0.99
MALAT1-216ENST00000620465 PAXIP1Q6ZW49 1069 aaPredicted RBP8.84□□□□□ -0.99
MALAT1-216ENST00000620465 HAX1O00165 279 aa8.83□□□□□ -1
MALAT1-216ENST00000620465 PSEN1P49768 467 aa8.83□□□□□ -1
MALAT1-216ENST00000620465 SPRYD3Q8NCJ5 442 aa8.83□□□□□ -1
MALAT1-216ENST00000620465 CFAP44Q96MT7 982 aa8.83□□□□□ -1
MALAT1-216ENST00000620465 HAP1P54257 671 aaPredicted RBP8.8□□□□□ -1
MALAT1-216ENST00000620465 NKX1-1Q15270 411 aaPredicted RBP8.79□□□□□ -1
MALAT1-216ENST00000620465 MS4A3Q96HJ5 214 aa8.78□□□□□ -1
MALAT1-216ENST00000620465 POTEHQ6S545 545 aa8.76□□□□□ -1.01
MALAT1-216ENST00000620465 RYDENQ9NUL5 291 aaKnown RBP8.76□□□□□ -1.01
MALAT1-216ENST00000620465 CLCN6P51797 869 aa8.75□□□□□ -1.01
MALAT1-216ENST00000620465 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
MALAT1-216ENST00000620465 EVX2Q03828 476 aa8.73□□□□□ -1.01
MALAT1-216ENST00000620465 CABP2Q9NPB3 220 aa8.72□□□□□ -1.01
MALAT1-216ENST00000620465 TMEM106CQ9BVX2 250 aa8.71□□□□□ -1.02
MALAT1-216ENST00000620465 TIE1P35590 1138 aa8.7□□□□□ -1.02
MALAT1-216ENST00000620465 TRPC6Q9Y210 931 aa8.7□□□□□ -1.02
MALAT1-216ENST00000620465 GALR2O43603 387 aaPredicted RBP8.69□□□□□ -1.02
MALAT1-216ENST00000620465 GOLGA2Q08379 1002 aa8.68□□□□□ -1.02
MALAT1-216ENST00000620465 EFCAB3Q8N7B9 438 aa8.68□□□□□ -1.02
MALAT1-216ENST00000620465 VSIG10Q8N0Z9 540 aa8.67□□□□□ -1.02
MALAT1-216ENST00000620465 SOX12O15370 315 aa8.66□□□□□ -1.02
MALAT1-216ENST00000620465 MFRPQ9BY79 579 aa8.66□□□□□ -1.02
MALAT1-216ENST00000620465 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
MALAT1-216ENST00000620465 TTLL13PA6NNM8 815 aa8.65□□□□□ -1.02
MALAT1-216ENST00000620465 BMP2KQ9NSY1 1161 aaPredicted RBP8.65□□□□□ -1.02
MALAT1-216ENST00000620465 NLRP6P59044 892 aa8.64□□□□□ -1.03
MALAT1-216ENST00000620465 MKRN3Q13064 507 aaKnown RBP8.62□□□□□ -1.03
MALAT1-216ENST00000620465 PHF8Q9UPP1 1060 aa8.62□□□□□ -1.03
MALAT1-216ENST00000620465 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
MALAT1-216ENST00000620465 GABBR2O75899 941 aa8.6□□□□□ -1.03
MALAT1-216ENST00000620465 TRIM35Q9UPQ4 493 aa8.6□□□□□ -1.03
MALAT1-216ENST00000620465 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
MALAT1-216ENST00000620465 ASTLQ6HA08 431 aaPredicted RBP8.57□□□□□ -1.04
MALAT1-216ENST00000620465 ATMINO43313 823 aaPredicted RBP8.56□□□□□ -1.04
MALAT1-216ENST00000620465 ATN1P54259 1190 aaPredicted RBP8.56□□□□□ -1.04
MALAT1-216ENST00000620465 MS4A4AQ96JQ5 239 aa8.55□□□□□ -1.04
MALAT1-216ENST00000620465 DCBLD2Q96PD2 775 aa8.54□□□□□ -1.04
MALAT1-216ENST00000620465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.54□□□□□ -1.04
MALAT1-216ENST00000620465 PPP1R37O75864 691 aa8.53□□□□□ -1.04
MALAT1-216ENST00000620465 IER5LQ5T953 404 aa8.53□□□□□ -1.04
MALAT1-216ENST00000620465 ILDR1Q86SU0 546 aaPredicted RBP8.53□□□□□ -1.04
MALAT1-216ENST00000620465 SP7Q8TDD2 431 aaPredicted RBP8.53□□□□□ -1.04
MALAT1-216ENST00000620465 IRX5P78411 483 aaPredicted RBP8.48□□□□□ -1.05
MALAT1-216ENST00000620465 CADPS2Q86UW7 1296 aa8.48□□□□□ -1.05
MALAT1-216ENST00000620465 PDCD7Q8N8D1 485 aaKnown RBP8.47□□□□□ -1.05
MALAT1-216ENST00000620465 OCEL1Q9H607 264 aa8.47□□□□□ -1.05
MALAT1-216ENST00000620465 PLCG2P16885 1265 aa8.46□□□□□ -1.06
MALAT1-216ENST00000620465 SLC39A7Q92504 469 aa8.45□□□□□ -1.06
MALAT1-216ENST00000620465 PELP1Q8IZL8 1130 aaKnown RBP8.44□□□□□ -1.06
MALAT1-216ENST00000620465 BCANQ96GW7 911 aa8.43□□□□□ -1.06
MALAT1-216ENST00000620465 SEC24BO95487 1268 aa8.42□□□□□ -1.06
MALAT1-216ENST00000620465 C7P10643 843 aa8.42□□□□□ -1.06
MALAT1-216ENST00000620465 DPY19L2Q6NUT2 758 aa8.42□□□□□ -1.06
MALAT1-216ENST00000620465 WDR70Q9NW82 654 aa8.42□□□□□ -1.06
MALAT1-216ENST00000620465 G3V3G9 751 aa8.41□□□□□ -1.06
MALAT1-216ENST00000620465 POTEIP0CG38 1075 aa8.41□□□□□ -1.06
MALAT1-216ENST00000620465 MICALL2Q8IY33 904 aa8.41□□□□□ -1.06
MALAT1-216ENST00000620465 METRNQ9UJH8 293 aa8.41□□□□□ -1.06
MALAT1-216ENST00000620465 P3H3Q8IVL6 736 aa8.4□□□□□ -1.06
MALAT1-216ENST00000620465 NCKAP5LQ9HCH0 1330 aa8.39□□□□□ -1.07
MALAT1-216ENST00000620465 COLQQ9Y215 455 aaPredicted RBP8.39□□□□□ -1.07
MALAT1-216ENST00000620465 BOLA1Q9Y3E2 137 aa8.39□□□□□ -1.07
MALAT1-216ENST00000620465 PDE4AP27815 886 aa8.38□□□□□ -1.07
MALAT1-216ENST00000620465 L3MBTL3Q96JM7 780 aaPredicted RBP8.38□□□□□ -1.07
MALAT1-216ENST00000620465 CRISPLD2Q9H0B8 497 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms