RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 SPRYD3Q8NCJ5 442 aa7.36□□□□□ -1.23
CCNT1-205ENST00000618666 ERICH6BQ5W0A0 696 aa7.36□□□□□ -1.23
CCNT1-205ENST00000618666 FAM9BQ8IZU0 186 aa7.35□□□□□ -1.23
CCNT1-205ENST00000618666 ANP32CO43423 234 aa7.35□□□□□ -1.23
CCNT1-205ENST00000618666 PDE4CQ08493 712 aa7.35□□□□□ -1.23
CCNT1-205ENST00000618666 AEBP2Q6ZN18 517 aaPredicted RBP7.35□□□□□ -1.23
CCNT1-205ENST00000618666 NCLP19338 710 aaKnown RBP7.35□□□□□ -1.23
CCNT1-205ENST00000618666 GZF1Q9H116 711 aaPredicted RBP7.33□□□□□ -1.24
CCNT1-205ENST00000618666 DDX10Q13206 875 aaKnown RBP7.32□□□□□ -1.24
CCNT1-205ENST00000618666 TNNT3P45378 269 aaPredicted RBP7.31□□□□□ -1.24
CCNT1-205ENST00000618666 BCL11BQ9C0K0 894 aaPredicted RBP7.31□□□□□ -1.24
CCNT1-205ENST00000618666 PLCB2Q00722 1185 aa7.31□□□□□ -1.24
CCNT1-205ENST00000618666 B4GALNT3Q6L9W6 998 aa7.3□□□□□ -1.24
CCNT1-205ENST00000618666 APPP05067 770 aa7.29□□□□□ -1.24
CCNT1-205ENST00000618666 CANXP27824 592 aaKnown RBP7.29□□□□□ -1.24
CCNT1-205ENST00000618666 PAXIP1Q6ZW49 1069 aaPredicted RBP7.29□□□□□ -1.24
CCNT1-205ENST00000618666 PTMSP20962 102 aa7.28□□□□□ -1.24
CCNT1-205ENST00000618666 PTMAP06454 111 aaKnown RBP7.28□□□□□ -1.24
CCNT1-205ENST00000618666 AEBP1Q8IUX7 1158 aa7.26□□□□□ -1.25
CCNT1-205ENST00000618666 RBM25P49756 843 aaKnown RBP7.26□□□□□ -1.25
CCNT1-205ENST00000618666 PLCD3Q8N3E9 789 aa7.25□□□□□ -1.25
CCNT1-205ENST00000618666 PNNQ9H307 717 aaKnown RBP7.25□□□□□ -1.25
CCNT1-205ENST00000618666 E9PSI1 815 aa7.23□□□□□ -1.25
CCNT1-205ENST00000618666 CHMP4AQ9BY43 222 aa7.23□□□□□ -1.25
CCNT1-205ENST00000618666 BRPF3Q9ULD4 1205 aa7.22□□□□□ -1.25
CCNT1-205ENST00000618666 SLC4A3P48751 1232 aa7.22□□□□□ -1.25
CCNT1-205ENST00000618666 TAOK2Q9UL54 1235 aa7.22□□□□□ -1.25
CCNT1-205ENST00000618666 FAM13BQ9NYF5 915 aa7.21□□□□□ -1.26
CCNT1-205ENST00000618666 PATL2C9JE40 543 aaKnown RBP7.2□□□□□ -1.26
CCNT1-205ENST00000618666 ZMYND15Q9H091 742 aa7.2□□□□□ -1.26
CCNT1-205ENST00000618666 RBM10P98175 930 aaKnown RBP7.19□□□□□ -1.26
CCNT1-205ENST00000618666 DHX37Q8IY37 1157 aaKnown RBP7.18□□□□□ -1.26
CCNT1-205ENST00000618666 PRDM10Q9NQV6 1147 aa7.18□□□□□ -1.26
CCNT1-205ENST00000618666 RGS3P49796 1198 aa7.17□□□□□ -1.26
CCNT1-205ENST00000618666 TAF7LQ5H9L4 462 aa7.16□□□□□ -1.26
CCNT1-205ENST00000618666 SLKQ9H2G2 1235 aaPredicted RBP7.16□□□□□ -1.26
CCNT1-205ENST00000618666 MEX3CQ5U5Q3 659 aaKnown RBP7.16□□□□□ -1.26
CCNT1-205ENST00000618666 UBE2Q2Q8WVN8 375 aa7.16□□□□□ -1.26
CCNT1-205ENST00000618666 MSNP26038 577 aaKnown RBP7.15□□□□□ -1.26
CCNT1-205ENST00000618666 ZNF771Q7L3S4 317 aaPredicted RBP7.15□□□□□ -1.27
CCNT1-205ENST00000618666 RSPH6AQ9H0K4 717 aa7.14□□□□□ -1.27
CCNT1-205ENST00000618666 FAM50AQ14320 339 aaKnown RBP7.14□□□□□ -1.27
CCNT1-205ENST00000618666 UPF2Q9HAU5 1272 aaKnown RBP7.14□□□□□ -1.27
CCNT1-205ENST00000618666 TNNT1P13805 278 aa7.13□□□□□ -1.27
CCNT1-205ENST00000618666 PPM1GO15355 546 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-205ENST00000618666 PDIA4P13667 645 aaKnown RBP7.13□□□□□ -1.27
CCNT1-205ENST00000618666 ZHX1Q9UKY1 873 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-205ENST00000618666 TULP1O00294 542 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-205ENST00000618666 BBXQ8WY36 941 aaPredicted RBP7.12□□□□□ -1.27
CCNT1-205ENST00000618666 VGLL3A8MV65 326 aa7.1□□□□□ -1.27
CCNT1-205ENST00000618666 C11orf95C9JLR9 678 aaPredicted RBP7.1□□□□□ -1.27
CCNT1-205ENST00000618666 TRERF1Q96PN7 1200 aa7.1□□□□□ -1.27
CCNT1-205ENST00000618666 CHMP4BQ9H444 224 aaKnown RBP7.1□□□□□ -1.27
CCNT1-205ENST00000618666 CALRP27797 417 aaKnown RBP7.09□□□□□ -1.27
CCNT1-205ENST00000618666 FOXD4L1Q9NU39 408 aa7.09□□□□□ -1.27
CCNT1-205ENST00000618666 DDRGK1Q96HY6 314 aa7.07□□□□□ -1.28
CCNT1-205ENST00000618666 KCNH8Q96L42 1107 aa7.07□□□□□ -1.28
CCNT1-205ENST00000618666 SKIDA1Q1XH10 827 aa7.06□□□□□ -1.28
CCNT1-205ENST00000618666 MRS2Q9HD23 443 aa7.05□□□□□ -1.28
CCNT1-205ENST00000618666 IBSPP21815 317 aaPredicted RBP7.05□□□□□ -1.28
CCNT1-205ENST00000618666 P3H3Q8IVL6 736 aa7.05□□□□□ -1.28
CCNT1-205ENST00000618666 BECN1Q14457 450 aa7.03□□□□□ -1.28
CCNT1-205ENST00000618666 NCBP3Q53F19 620 aaKnown RBP7.03□□□□□ -1.28
CCNT1-205ENST00000618666 PAK3O75914 559 aaPredicted RBP7.02□□□□□ -1.29
CCNT1-205ENST00000618666 GSE1Q14687 1217 aa7.02□□□□□ -1.29
CCNT1-205ENST00000618666 FOXD4L5Q5VV16 416 aaPredicted RBP7.02□□□□□ -1.29
CCNT1-205ENST00000618666 DRC7Q8IY82 874 aa7.02□□□□□ -1.29
CCNT1-205ENST00000618666 FOXD4L4Q8WXT5 416 aaPredicted RBP7.02□□□□□ -1.29
CCNT1-205ENST00000618666 MPNDQ8N594 471 aa7.02□□□□□ -1.29
CCNT1-205ENST00000618666 L1TD1Q5T7N2 865 aaKnown RBP7.01□□□□□ -1.29
CCNT1-205ENST00000618666 BAZ1BQ9UIG0 1483 aaKnown RBP7.01□□□□□ -1.29
CCNT1-205ENST00000618666 CFAP44Q96MT7 982 aa7.01□□□□□ -1.29
CCNT1-205ENST00000618666 GOLGA6L3A6NEY3 463 aa7.01□□□□□ -1.29
CCNT1-205ENST00000618666 R3HCC1Q9Y3T6 440 aaKnown RBP7.01□□□□□ -1.29
CCNT1-205ENST00000618666 GPATCH11Q8N954 259 aa7□□□□□ -1.29
CCNT1-205ENST00000618666 FRAT1Q92837 279 aaPredicted RBP7□□□□□ -1.29
CCNT1-205ENST00000618666 C14orf37Q86TY3 774 aa7□□□□□ -1.29
CCNT1-205ENST00000618666 IPO9Q96P70 1041 aaKnown RBP7□□□□□ -1.29
CCNT1-205ENST00000618666 SENP3Q9H4L4 574 aaPredicted RBP7□□□□□ -1.29
CCNT1-205ENST00000618666 PPP4R2Q9NY27 417 aa7□□□□□ -1.29
CCNT1-205ENST00000618666 CHAF1AQ13111 956 aaPredicted RBP7□□□□□ -1.29
CCNT1-205ENST00000618666 FOXD4L6Q3SYB3 417 aaPredicted RBP6.99□□□□□ -1.29
CCNT1-205ENST00000618666 FOXD4L3Q6VB84 417 aaPredicted RBP6.99□□□□□ -1.29
CCNT1-205ENST00000618666 ERICH4A6NGS2 130 aa6.99□□□□□ -1.29
CCNT1-205ENST00000618666 SIN3AQ96ST3 1273 aa6.99□□□□□ -1.29
CCNT1-205ENST00000618666 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.99□□□□□ -1.29
CCNT1-205ENST00000618666 ZFP91Q96JP5 570 aaPredicted RBP6.99□□□□□ -1.29
CCNT1-205ENST00000618666 FBXO3Q9UK99 471 aa6.99□□□□□ -1.29
CCNT1-205ENST00000618666 GOLGA6L22H0YM25 854 aa6.99□□□□□ -1.29
CCNT1-205ENST00000618666 CERS3Q8IU89 383 aa6.98□□□□□ -1.29
CCNT1-205ENST00000618666 PLCD4Q9BRC7 762 aa6.98□□□□□ -1.29
CCNT1-205ENST00000618666 HSP90AB1P08238 724 aaKnown RBP6.97□□□□□ -1.29
CCNT1-205ENST00000618666 MSH5O43196 834 aa6.97□□□□□ -1.29
CCNT1-205ENST00000618666 NAP1L2Q9ULW6 460 aaPredicted RBP6.97□□□□□ -1.29
CCNT1-205ENST00000618666 KLHL34Q8N239 644 aa6.97□□□□□ -1.29
CCNT1-205ENST00000618666 WWC1Q8IX03 1113 aa6.96□□□□□ -1.29
CCNT1-205ENST00000618666 ZNF592Q92610 1267 aa6.96□□□□□ -1.29
CCNT1-205ENST00000618666 TMC1Q8TDI8 760 aa6.96□□□□□ -1.3
CCNT1-205ENST00000618666 ZBTB9Q96C00 473 aa6.96□□□□□ -1.3
CCNT1-205ENST00000618666 CGNQ9P2M7 1197 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms