RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-225ENST00000617087 DNAJC5Q9H3Z4 198 aa12.49□□□□□ -0.41
PVT1-225ENST00000617087 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
PVT1-225ENST00000617087 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
PVT1-225ENST00000617087 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
PVT1-225ENST00000617087 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
PVT1-225ENST00000617087 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
PVT1-225ENST00000617087 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
PVT1-225ENST00000617087 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
PVT1-225ENST00000617087 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.42
PVT1-225ENST00000617087 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
PVT1-225ENST00000617087 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
PVT1-225ENST00000617087 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
PVT1-225ENST00000617087 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
PVT1-225ENST00000617087 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
PVT1-225ENST00000617087 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
PVT1-225ENST00000617087 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
PVT1-225ENST00000617087 SGIP1Q9BQI5 828 aa12.3□□□□□ -0.44
PVT1-225ENST00000617087 TPRNQ4KMQ1 711 aa12.29□□□□□ -0.44
PVT1-225ENST00000617087 STK25O00506 426 aa12.28□□□□□ -0.44
PVT1-225ENST00000617087 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
PVT1-225ENST00000617087 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
PVT1-225ENST00000617087 ZFP91Q96JP5 570 aaPredicted RBP12.21□□□□□ -0.45
PVT1-225ENST00000617087 PYGBP11216 843 aa12.2□□□□□ -0.46
PVT1-225ENST00000617087 BCL11BQ9C0K0 894 aaPredicted RBP12.19□□□□□ -0.46
PVT1-225ENST00000617087 STK24Q9Y6E0 443 aa12.18□□□□□ -0.46
PVT1-225ENST00000617087 NBR1Q14596 966 aa12.16□□□□□ -0.46
PVT1-225ENST00000617087 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
PVT1-225ENST00000617087 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
PVT1-225ENST00000617087 ZNF467Q7Z7K2 595 aaPredicted RBP12.05□□□□□ -0.48
PVT1-225ENST00000617087 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
PVT1-225ENST00000617087 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
PVT1-225ENST00000617087 PDAP1Q13442 181 aaKnown RBP12□□□□□ -0.49
PVT1-225ENST00000617087 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
PVT1-225ENST00000617087 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.49
PVT1-225ENST00000617087 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
PVT1-225ENST00000617087 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
PVT1-225ENST00000617087 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
PVT1-225ENST00000617087 PSEN1P49768 467 aa11.92□□□□□ -0.5
PVT1-225ENST00000617087 FXR2P51116 673 aaKnown RBP eCLIP11.91□□□□□ -0.5
PVT1-225ENST00000617087 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
PVT1-225ENST00000617087 P3H3Q8IVL6 736 aa11.91□□□□□ -0.5
PVT1-225ENST00000617087 MFRPQ9BY79 579 aa11.89□□□□□ -0.51
PVT1-225ENST00000617087 WDR70Q9NW82 654 aa11.86□□□□□ -0.51
PVT1-225ENST00000617087 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
PVT1-225ENST00000617087 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
PVT1-225ENST00000617087 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
PVT1-225ENST00000617087 MAP3K13O43283 966 aa11.8□□□□□ -0.52
PVT1-225ENST00000617087 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
PVT1-225ENST00000617087 FBXO22Q8NEZ5 403 aa11.79□□□□□ -0.52
PVT1-225ENST00000617087 PPP1R37O75864 691 aa11.78□□□□□ -0.52
PVT1-225ENST00000617087 EFCAB3Q8N7B9 438 aa11.78□□□□□ -0.52
PVT1-225ENST00000617087 SOX12O15370 315 aa11.77□□□□□ -0.53
PVT1-225ENST00000617087 NLRP6P59044 892 aa11.77□□□□□ -0.53
PVT1-225ENST00000617087 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
PVT1-225ENST00000617087 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
PVT1-225ENST00000617087 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
PVT1-225ENST00000617087 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
PVT1-225ENST00000617087 CHRDL2Q6WN34 429 aa11.72□□□□□ -0.53
PVT1-225ENST00000617087 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
PVT1-225ENST00000617087 ARHGEF1Q92888 912 aaKnown RBP11.69□□□□□ -0.54
PVT1-225ENST00000617087 E2F4Q16254 413 aa11.67□□□□□ -0.54
PVT1-225ENST00000617087 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
PVT1-225ENST00000617087 MS4A4AQ96JQ5 239 aa11.63□□□□□ -0.55
PVT1-225ENST00000617087 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
PVT1-225ENST00000617087 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
PVT1-225ENST00000617087 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
PVT1-225ENST00000617087 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
PVT1-225ENST00000617087 PDE4AP27815 886 aa11.58□□□□□ -0.56
PVT1-225ENST00000617087 MFSD10Q14728 455 aa11.58□□□□□ -0.56
PVT1-225ENST00000617087 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
PVT1-225ENST00000617087 TMEM132AQ24JP5 1023 aa11.57□□□□□ -0.56
PVT1-225ENST00000617087 LARP6Q9BRS8 491 aaKnown RBP11.56□□□□□ -0.56
PVT1-225ENST00000617087 CRISPLD2Q9H0B8 497 aa11.56□□□□□ -0.56
PVT1-225ENST00000617087 SEMA3EO15041 775 aa11.55□□□□□ -0.56
PVT1-225ENST00000617087 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
PVT1-225ENST00000617087 GTF3C3Q9Y5Q9 886 aa11.55□□□□□ -0.56
PVT1-225ENST00000617087 ARIH1Q9Y4X5 557 aaPredicted RBP11.54□□□□□ -0.56
PVT1-225ENST00000617087 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
PVT1-225ENST00000617087 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
PVT1-225ENST00000617087 TRPC6Q9Y210 931 aa11.52□□□□□ -0.57
PVT1-225ENST00000617087 MS4A3Q96HJ5 214 aa11.51□□□□□ -0.57
PVT1-225ENST00000617087 DDX27Q96GQ7 796 aaKnown RBP11.5□□□□□ -0.57
PVT1-225ENST00000617087 MKRN3Q13064 507 aaKnown RBP11.49□□□□□ -0.57
PVT1-225ENST00000617087 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
PVT1-225ENST00000617087 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
PVT1-225ENST00000617087 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
PVT1-225ENST00000617087 TIMELESSQ9UNS1 1208 aa11.47□□□□□ -0.57
PVT1-225ENST00000617087 TIE1P35590 1138 aa11.45□□□□□ -0.58
PVT1-225ENST00000617087 SMYD5Q6GMV2 418 aa11.45□□□□□ -0.58
PVT1-225ENST00000617087 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
PVT1-225ENST00000617087 TTLL13PA6NNM8 815 aa11.41□□□□□ -0.58
PVT1-225ENST00000617087 SLC24A3Q9HC58 644 aa11.4□□□□□ -0.58
PVT1-225ENST00000617087 ZMYND10O75800 440 aa11.39□□□□□ -0.59
PVT1-225ENST00000617087 ERICH6Q7L0X2 663 aa11.39□□□□□ -0.59
PVT1-225ENST00000617087 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.596e-7■■■□□ 17.7
PVT1-225ENST00000617087 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
PVT1-225ENST00000617087 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
PVT1-225ENST00000617087 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
PVT1-225ENST00000617087 BARGINQ6ZT62 677 aa11.33□□□□□ -0.6
PVT1-225ENST00000617087 NEUROD2Q15784 382 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms