RNA–Protein interactions for RNA: ENST00000616683.4

RAD17-220, Transcript of RAD17 checkpoint clamp loader component, humanhuman

TSL 1 (best) BASIC

Gene RAD17, Length 3,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD17-220ENST00000616683 NAP1L5Q96NT1 182 aaPredicted RBP7.78□□□□□ -1.16
RAD17-220ENST00000616683 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.16
RAD17-220ENST00000616683 CHRM1P11229 460 aaPredicted RBP7.75□□□□□ -1.17
RAD17-220ENST00000616683 HAP1P54257 671 aaPredicted RBP7.75□□□□□ -1.17
RAD17-220ENST00000616683 NAP1L2Q9ULW6 460 aaPredicted RBP7.75□□□□□ -1.17
RAD17-220ENST00000616683 IPO4Q8TEX9 1081 aaKnown RBP7.75□□□□□ -1.17
RAD17-220ENST00000616683 CHIC1Q5VXU3 224 aa7.75□□□□□ -1.17
RAD17-220ENST00000616683 BICRAQ9NZM4 1560 aa7.74□□□□□ -1.17
RAD17-220ENST00000616683 CDK11BP21127 795 aaKnown RBP7.71□□□□□ -1.18
RAD17-220ENST00000616683 TEX2Q8IWB9 1127 aa7.7□□□□□ -1.18
RAD17-220ENST00000616683 CCER1Q8TC90 406 aaPredicted RBP7.7□□□□□ -1.18
RAD17-220ENST00000616683 WASHC2CQ9Y4E1 1318 aa7.7□□□□□ -1.18
RAD17-220ENST00000616683 RRP9O43818 475 aaKnown RBP7.7□□□□□ -1.18
RAD17-220ENST00000616683 TPRNQ4KMQ1 711 aa7.69□□□□□ -1.18
RAD17-220ENST00000616683 EIF4G1Q04637 1599 aaKnown RBP7.69□□□□□ -1.18
RAD17-220ENST00000616683 BCANQ96GW7 911 aa7.69□□□□□ -1.18
RAD17-220ENST00000616683 ZNF316A6NFI3 1004 aaPredicted RBP7.68□□□□□ -1.18
RAD17-220ENST00000616683 PRDM4Q9UKN5 801 aa7.67□□□□□ -1.18
RAD17-220ENST00000616683 YTHDC1Q96MU7 727 aaKnown RBP7.67□□□□□ -1.18
RAD17-220ENST00000616683 WASHC2AQ641Q2 1341 aa7.67□□□□□ -1.18
RAD17-220ENST00000616683 TRHP20396 242 aaPredicted RBP7.67□□□□□ -1.18
RAD17-220ENST00000616683 KCNA4P22459 653 aa7.67□□□□□ -1.18
RAD17-220ENST00000616683 GTF2E1P29083 439 aaPredicted RBP7.66□□□□□ -1.18
RAD17-220ENST00000616683 SHROOM4Q9ULL8 1493 aa7.66□□□□□ -1.18
RAD17-220ENST00000616683 CENPJQ9HC77 1338 aaPredicted RBP7.66□□□□□ -1.18
RAD17-220ENST00000616683 CALD1Q05682 793 aaKnown RBP7.65□□□□□ -1.18
RAD17-220ENST00000616683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.64□□□□□ -1.19
RAD17-220ENST00000616683 ZFP91Q96JP5 570 aaPredicted RBP7.64□□□□□ -1.19
RAD17-220ENST00000616683 CUX2O14529 1486 aa7.63□□□□□ -1.19
RAD17-220ENST00000616683 MIER1Q8N108 512 aa7.63□□□□□ -1.19
RAD17-220ENST00000616683 BBXQ8WY36 941 aaPredicted RBP7.63□□□□□ -1.19
RAD17-220ENST00000616683 FTSJ3Q8IY81 847 aaKnown RBP7.62□□□□□ -1.19
RAD17-220ENST00000616683 FAM43AQ8N2R8 423 aa7.62□□□□□ -1.19
RAD17-220ENST00000616683 RNF216Q9NWF9 866 aaPredicted RBP7.62□□□□□ -1.19
RAD17-220ENST00000616683 STAC3Q96MF2 364 aa7.61□□□□□ -1.19
RAD17-220ENST00000616683 CHMP4BQ9H444 224 aaKnown RBP7.61□□□□□ -1.19
RAD17-220ENST00000616683 VGFO15240 615 aaPredicted RBP7.6□□□□□ -1.19
RAD17-220ENST00000616683 HSP90AA2PQ14568 343 aaPredicted RBP7.59□□□□□ -1.19
RAD17-220ENST00000616683 TMEM132AQ24JP5 1023 aa7.59□□□□□ -1.19
RAD17-220ENST00000616683 ARID4BQ4LE39 1312 aaPredicted RBP7.58□□□□□ -1.2
RAD17-220ENST00000616683 SECISBP2LQ93073 1101 aaKnown RBP7.58□□□□□ -1.2
RAD17-220ENST00000616683 NOP58Q9Y2X3 529 aaKnown RBP7.58□□□□□ -1.2
RAD17-220ENST00000616683 CANXP27824 592 aaKnown RBP7.57□□□□□ -1.2
RAD17-220ENST00000616683 ARID3AQ99856 593 aa7.56□□□□□ -1.2
RAD17-220ENST00000616683 USP35Q9P2H5 1018 aa7.56□□□□□ -1.2
RAD17-220ENST00000616683 HMGB1P09429 215 aaKnown RBP7.56□□□□□ -1.2
RAD17-220ENST00000616683 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
RAD17-220ENST00000616683 FBLN2P98095 1184 aa7.55□□□□□ -1.2
RAD17-220ENST00000616683 TICAM2Q86XR7 235 aa7.55□□□□□ -1.2
RAD17-220ENST00000616683 NCLP19338 710 aaKnown RBP7.54□□□□□ -1.2
RAD17-220ENST00000616683 CNGB1Q14028 1251 aaPredicted RBP7.54□□□□□ -1.2
RAD17-220ENST00000616683 PPM1GO15355 546 aaPredicted RBP7.53□□□□□ -1.2
RAD17-220ENST00000616683 CYB5RLQ6IPT4 315 aa7.52□□□□□ -1.21
RAD17-220ENST00000616683 NESP48681 1621 aa7.52□□□□□ -1.21
RAD17-220ENST00000616683 IRX6P78412 446 aaPredicted RBP7.51□□□□□ -1.21
RAD17-220ENST00000616683 GRIPAP1Q4V328 841 aa7.51□□□□□ -1.21
RAD17-220ENST00000616683 OSCARQ8IYS5 282 aa7.51□□□□□ -1.21
RAD17-220ENST00000616683 CCDC9Q9Y3X0 531 aaKnown RBP7.5□□□□□ -1.21
RAD17-220ENST00000616683 ZCCHC6Q5VYS8 1495 aaKnown RBP7.5□□□□□ -1.21
RAD17-220ENST00000616683 CNPY4Q8N129 248 aa7.5□□□□□ -1.21
RAD17-220ENST00000616683 NBR1Q14596 966 aa7.49□□□□□ -1.21
RAD17-220ENST00000616683 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.49□□□□□ -1.21
RAD17-220ENST00000616683 HSP90AA1P07900 732 aaKnown RBP7.48□□□□□ -1.21
RAD17-220ENST00000616683 ILDR1Q86SU0 546 aaPredicted RBP7.48□□□□□ -1.21
RAD17-220ENST00000616683 MMP14P50281 582 aa7.48□□□□□ -1.21
RAD17-220ENST00000616683 BRPF3Q9ULD4 1205 aa7.48□□□□□ -1.21
RAD17-220ENST00000616683 IGSF3O75054 1194 aa7.48□□□□□ -1.21
RAD17-220ENST00000616683 KCNG1Q9UIX4 513 aa7.48□□□□□ -1.21
RAD17-220ENST00000616683 SMARCA2P51531 1590 aa7.47□□□□□ -1.21
RAD17-220ENST00000616683 PUS7Q96PZ0 661 aaKnown RBP7.47□□□□□ -1.21
RAD17-220ENST00000616683 RGS3P49796 1198 aa7.46□□□□□ -1.21
RAD17-220ENST00000616683 CLSTN1O94985 981 aa7.46□□□□□ -1.22
RAD17-220ENST00000616683 FKBP8Q14318 412 aa7.46□□□□□ -1.22
RAD17-220ENST00000616683 RGS22Q8NE09 1264 aa7.46□□□□□ -1.22
RAD17-220ENST00000616683 PDCL3Q9H2J4 239 aa7.46□□□□□ -1.22
RAD17-220ENST00000616683 FOXD1Q16676 465 aa7.45□□□□□ -1.22
RAD17-220ENST00000616683 TMEM51Q9NW97 253 aa7.45□□□□□ -1.22
RAD17-220ENST00000616683 PAK3O75914 559 aaPredicted RBP7.44□□□□□ -1.22
RAD17-220ENST00000616683 ZNF830Q96NB3 372 aaPredicted RBP7.44□□□□□ -1.22
RAD17-220ENST00000616683 PPP6R1Q9UPN7 881 aa7.43□□□□□ -1.22
RAD17-220ENST00000616683 MCCP23508 829 aa7.43□□□□□ -1.22
RAD17-220ENST00000616683 SMAP1Q8IYB5 467 aaPredicted RBP7.42□□□□□ -1.22
RAD17-220ENST00000616683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.42□□□□□ -1.22
RAD17-220ENST00000616683 UTP14CQ5TAP6 766 aaKnown RBP7.42□□□□□ -1.22
RAD17-220ENST00000616683 POLR3GLQ9BT43 218 aa7.42□□□□□ -1.22
RAD17-220ENST00000616683 CLGNO14967 610 aa7.41□□□□□ -1.22
RAD17-220ENST00000616683 UBTFP17480 764 aaKnown RBP7.41□□□□□ -1.22
RAD17-220ENST00000616683 WWC1Q8IX03 1113 aa7.41□□□□□ -1.22
RAD17-220ENST00000616683 PTMAP06454 111 aaKnown RBP7.41□□□□□ -1.22
RAD17-220ENST00000616683 NEFMP07197 916 aa7.41□□□□□ -1.22
RAD17-220ENST00000616683 SUPT5HO00267 1087 aaKnown RBP7.39□□□□□ -1.23
RAD17-220ENST00000616683 IPO9Q96P70 1041 aaKnown RBP7.39□□□□□ -1.23
RAD17-220ENST00000616683 PLCB2Q00722 1185 aa7.38□□□□□ -1.23
RAD17-220ENST00000616683 GSE1Q14687 1217 aa7.38□□□□□ -1.23
RAD17-220ENST00000616683 ANP32BQ92688 251 aaKnown RBP7.38□□□□□ -1.23
RAD17-220ENST00000616683 BAZ1BQ9UIG0 1483 aaKnown RBP7.38□□□□□ -1.23
RAD17-220ENST00000616683 ZNF622Q969S3 477 aaKnown RBP eCLIP7.38□□□□□ -1.23
RAD17-220ENST00000616683 PRDM10Q9NQV6 1147 aa7.38□□□□□ -1.23
RAD17-220ENST00000616683 PDS5BQ9NTI5 1447 aa7.38□□□□□ -1.23
RAD17-220ENST00000616683 AXDND1Q5T1B0 1012 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms