RNA–Protein interactions for RNA: ENST00000616659.1

C3orf49-203, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C3orf49, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-203ENST00000616659 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
C3orf49-203ENST00000616659 IFNLR1Q8IU57 520 aaPredicted RBP13.62□□□□□ -0.23
C3orf49-203ENST00000616659 POTEIP0CG38 1075 aa13.61□□□□□ -0.23
C3orf49-203ENST00000616659 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
C3orf49-203ENST00000616659 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
C3orf49-203ENST00000616659 KIF12Q96FN5 646 aa13.58□□□□□ -0.24
C3orf49-203ENST00000616659 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
C3orf49-203ENST00000616659 MAP3K13O43283 966 aa13.51□□□□□ -0.25
C3orf49-203ENST00000616659 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
C3orf49-203ENST00000616659 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
C3orf49-203ENST00000616659 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
C3orf49-203ENST00000616659 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
C3orf49-203ENST00000616659 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
C3orf49-203ENST00000616659 GSE1Q14687 1217 aa13.42□□□□□ -0.26
C3orf49-203ENST00000616659 ASTLQ6HA08 431 aaPredicted RBP13.42□□□□□ -0.26
C3orf49-203ENST00000616659 PCDHB13Q9Y5F0 798 aa13.4□□□□□ -0.26
C3orf49-203ENST00000616659 ATMINO43313 823 aaPredicted RBP13.39□□□□□ -0.27
C3orf49-203ENST00000616659 PYGBP11216 843 aa13.39□□□□□ -0.27
C3orf49-203ENST00000616659 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
C3orf49-203ENST00000616659 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
C3orf49-203ENST00000616659 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
C3orf49-203ENST00000616659 TIE1P35590 1138 aa13.35□□□□□ -0.27
C3orf49-203ENST00000616659 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
C3orf49-203ENST00000616659 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
C3orf49-203ENST00000616659 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
C3orf49-203ENST00000616659 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
C3orf49-203ENST00000616659 LHX8Q68G74 356 aa13.27□□□□□ -0.29
C3orf49-203ENST00000616659 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
C3orf49-203ENST00000616659 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
C3orf49-203ENST00000616659 ZNF467Q7Z7K2 595 aaPredicted RBP13.22□□□□□ -0.29
C3orf49-203ENST00000616659 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
C3orf49-203ENST00000616659 C7P10643 843 aa13.2□□□□□ -0.3
C3orf49-203ENST00000616659 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
C3orf49-203ENST00000616659 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
C3orf49-203ENST00000616659 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
C3orf49-203ENST00000616659 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
C3orf49-203ENST00000616659 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
C3orf49-203ENST00000616659 IER5LQ5T953 404 aa13.12□□□□□ -0.31
C3orf49-203ENST00000616659 PSEN1P49768 467 aa13.09□□□□□ -0.31
C3orf49-203ENST00000616659 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
C3orf49-203ENST00000616659 PDAP1Q13442 181 aaKnown RBP13.08□□□□□ -0.32
C3orf49-203ENST00000616659 COLQQ9Y215 455 aaPredicted RBP13.08□□□□□ -0.32
C3orf49-203ENST00000616659 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
C3orf49-203ENST00000616659 PKD2Q13563 968 aa13.03□□□□□ -0.32
C3orf49-203ENST00000616659 IRX5P78411 483 aaPredicted RBP13.02□□□□□ -0.33
C3orf49-203ENST00000616659 OTUD5Q96G74 571 aa13.02□□□□□ -0.33
C3orf49-203ENST00000616659 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
C3orf49-203ENST00000616659 SEC24BO95487 1268 aa13□□□□□ -0.33
C3orf49-203ENST00000616659 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
C3orf49-203ENST00000616659 PLCG2P16885 1265 aa12.94□□□□□ -0.34
C3orf49-203ENST00000616659 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
C3orf49-203ENST00000616659 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
C3orf49-203ENST00000616659 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
C3orf49-203ENST00000616659 GOLGA2Q08379 1002 aa12.92□□□□□ -0.34
C3orf49-203ENST00000616659 PDCD7Q8N8D1 485 aaKnown RBP12.92□□□□□ -0.34
C3orf49-203ENST00000616659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
C3orf49-203ENST00000616659 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
C3orf49-203ENST00000616659 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
C3orf49-203ENST00000616659 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
C3orf49-203ENST00000616659 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
C3orf49-203ENST00000616659 RGL2O15211 777 aa12.88□□□□□ -0.35
C3orf49-203ENST00000616659 SCUBE2Q9NQ36 999 aa12.85□□□□□ -0.35
C3orf49-203ENST00000616659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
C3orf49-203ENST00000616659 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
C3orf49-203ENST00000616659 TAOK2Q9UL54 1235 aa12.81□□□□□ -0.36
C3orf49-203ENST00000616659 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
C3orf49-203ENST00000616659 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
C3orf49-203ENST00000616659 STK25O00506 426 aa12.73□□□□□ -0.37
C3orf49-203ENST00000616659 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
C3orf49-203ENST00000616659 SOX12O15370 315 aa12.72□□□□□ -0.37
C3orf49-203ENST00000616659 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
C3orf49-203ENST00000616659 MS4A4AQ96JQ5 239 aa12.7□□□□□ -0.38
C3orf49-203ENST00000616659 PHF8Q9UPP1 1060 aa12.69□□□□□ -0.38
C3orf49-203ENST00000616659 SLAIN1Q8ND83 568 aa12.68□□□□□ -0.38
C3orf49-203ENST00000616659 FBXO22Q8NEZ5 403 aa12.66□□□□□ -0.38
C3orf49-203ENST00000616659 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
C3orf49-203ENST00000616659 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
C3orf49-203ENST00000616659 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
C3orf49-203ENST00000616659 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
C3orf49-203ENST00000616659 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
C3orf49-203ENST00000616659 LCE2DQ5TA82 110 aaPredicted RBP12.62□□□□□ -0.39
C3orf49-203ENST00000616659 HS6ST3Q8IZP7 471 aa12.62□□□□□ -0.39
C3orf49-203ENST00000616659 NLRP6P59044 892 aa12.61□□□□□ -0.39
C3orf49-203ENST00000616659 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
C3orf49-203ENST00000616659 G3V3G9 751 aa12.56□□□□□ -0.4
C3orf49-203ENST00000616659 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
C3orf49-203ENST00000616659 DNAJC5Q9H3Z4 198 aa12.53□□□□□ -0.4
C3orf49-203ENST00000616659 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
C3orf49-203ENST00000616659 TMEM92Q6UXU6 159 aa12.49□□□□□ -0.41
C3orf49-203ENST00000616659 POTEMA6NI47 508 aa12.47□□□□□ -0.41
C3orf49-203ENST00000616659 NKX1-1Q15270 411 aaPredicted RBP12.47□□□□□ -0.41
C3orf49-203ENST00000616659 SNPHO15079 494 aa12.45□□□□□ -0.42
C3orf49-203ENST00000616659 ST18O60284 1047 aa12.45□□□□□ -0.42
C3orf49-203ENST00000616659 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
C3orf49-203ENST00000616659 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
C3orf49-203ENST00000616659 PPP1R37O75864 691 aa12.43□□□□□ -0.42
C3orf49-203ENST00000616659 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
C3orf49-203ENST00000616659 HOXB3P14651 431 aaPredicted RBP12.39□□□□□ -0.43
C3orf49-203ENST00000616659 DCAF8L2P0C7V8 631 aa12.37□□□□□ -0.43
C3orf49-203ENST00000616659 KIF3CO14782 793 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms