RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
CCL16-206ENST00000613642 PLEKHG5O94827 1062 aa9.81□□□□□ -0.84
CCL16-206ENST00000613642 POTEB2H3BUK9 544 aa9.79□□□□□ -0.84
CCL16-206ENST00000613642 ASTLQ6HA08 431 aaPredicted RBP9.79□□□□□ -0.84
CCL16-206ENST00000613642 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
CCL16-206ENST00000613642 KIF12Q96FN5 646 aa9.77□□□□□ -0.85
CCL16-206ENST00000613642 RASEFQ8IZ41 740 aa9.76□□□□□ -0.85
CCL16-206ENST00000613642 FKBP8Q14318 412 aa9.75□□□□□ -0.85
CCL16-206ENST00000613642 ERICH6Q7L0X2 663 aa9.74□□□□□ -0.85
CCL16-206ENST00000613642 PLCD3Q8N3E9 789 aa9.74□□□□□ -0.85
CCL16-206ENST00000613642 OTUD5Q96G74 571 aa9.74□□□□□ -0.85
CCL16-206ENST00000613642 C7P10643 843 aa9.71□□□□□ -0.86
CCL16-206ENST00000613642 SLC39A7Q92504 469 aa9.71□□□□□ -0.86
CCL16-206ENST00000613642 MAP3K13O43283 966 aa9.7□□□□□ -0.86
CCL16-206ENST00000613642 METRNQ9UJH8 293 aa9.7□□□□□ -0.86
CCL16-206ENST00000613642 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
CCL16-206ENST00000613642 NUBP1P53384 320 aa9.68□□□□□ -0.86
CCL16-206ENST00000613642 ZBTB47Q9UFB7 747 aaPredicted RBP9.68□□□□□ -0.86
CCL16-206ENST00000613642 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
CCL16-206ENST00000613642 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
CCL16-206ENST00000613642 DAXXQ9UER7 740 aaPredicted RBP9.66□□□□□ -0.86
CCL16-206ENST00000613642 TIE1P35590 1138 aa9.65□□□□□ -0.86
CCL16-206ENST00000613642 POTEJP0CG39 1038 aa9.64□□□□□ -0.87
CCL16-206ENST00000613642 SGIP1Q9BQI5 828 aa9.63□□□□□ -0.87
CCL16-206ENST00000613642 POTEFA5A3E0 1075 aa9.6□□□□□ -0.87
CCL16-206ENST00000613642 TTLL13PA6NNM8 815 aa9.58□□□□□ -0.88
CCL16-206ENST00000613642 FBXO3Q9UK99 471 aa9.58□□□□□ -0.88
CCL16-206ENST00000613642 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
CCL16-206ENST00000613642 MAMSTRQ6ZN01 415 aa9.57□□□□□ -0.88
CCL16-206ENST00000613642 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
CCL16-206ENST00000613642 IFNL1Q8IU54 200 aa9.54□□□□□ -0.88
CCL16-206ENST00000613642 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
CCL16-206ENST00000613642 TRIM35Q9UPQ4 493 aa9.51□□□□□ -0.89
CCL16-206ENST00000613642 COLQQ9Y215 455 aaPredicted RBP9.51□□□□□ -0.89
CCL16-206ENST00000613642 IER5LQ5T953 404 aa9.5□□□□□ -0.89
CCL16-206ENST00000613642 DCAF8Q5TAQ9 597 aa9.5□□□□□ -0.89
CCL16-206ENST00000613642 SCUBE2Q9NQ36 999 aa9.5□□□□□ -0.89
CCL16-206ENST00000613642 SEC24BO95487 1268 aa9.47□□□□□ -0.89
CCL16-206ENST00000613642 POTEMA6NI47 508 aa9.46□□□□□ -0.9
CCL16-206ENST00000613642 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
CCL16-206ENST00000613642 TMEM106CQ9BVX2 250 aa9.46□□□□□ -0.9
CCL16-206ENST00000613642 PYGBP11216 843 aa9.45□□□□□ -0.9
CCL16-206ENST00000613642 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
CCL16-206ENST00000613642 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
CCL16-206ENST00000613642 KLHL34Q8N239 644 aa9.4□□□□□ -0.9
CCL16-206ENST00000613642 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
CCL16-206ENST00000613642 GSE1Q14687 1217 aa9.39□□□□□ -0.91
CCL16-206ENST00000613642 PCDHB8Q9UN66 801 aa9.39□□□□□ -0.91
CCL16-206ENST00000613642 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
CCL16-206ENST00000613642 PLSCR2Q9NRY7 297 aa9.38□□□□□ -0.91
CCL16-206ENST00000613642 CHRM1P11229 460 aaPredicted RBP9.36□□□□□ -0.91
CCL16-206ENST00000613642 PLCG2P16885 1265 aa9.36□□□□□ -0.91
CCL16-206ENST00000613642 PCDH10Q9P2E7 1040 aa9.35□□□□□ -0.91
CCL16-206ENST00000613642 ZNF467Q7Z7K2 595 aaPredicted RBP9.33□□□□□ -0.92
CCL16-206ENST00000613642 OCEL1Q9H607 264 aa9.33□□□□□ -0.92
CCL16-206ENST00000613642 IFNLR1Q8IU57 520 aaPredicted RBP9.3□□□□□ -0.92
CCL16-206ENST00000613642 SLAIN1Q8ND83 568 aa9.3□□□□□ -0.92
CCL16-206ENST00000613642 SPOCK2Q92563 424 aa9.28□□□□□ -0.92
CCL16-206ENST00000613642 PDCD7Q8N8D1 485 aaKnown RBP9.25□□□□□ -0.93
CCL16-206ENST00000613642 PSEN1P49768 467 aa9.24□□□□□ -0.93
CCL16-206ENST00000613642 MKRN3Q13064 507 aaKnown RBP9.22□□□□□ -0.93
CCL16-206ENST00000613642 ST18O60284 1047 aa9.21□□□□□ -0.94
CCL16-206ENST00000613642 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.21□□□□□ -0.94
CCL16-206ENST00000613642 CIZ1Q9ULV3 898 aaPredicted RBP9.21□□□□□ -0.94
CCL16-206ENST00000613642 GOLGA2Q08379 1002 aa9.2□□□□□ -0.94
CCL16-206ENST00000613642 PDAP1Q13442 181 aaKnown RBP9.2□□□□□ -0.94
CCL16-206ENST00000613642 ILDR1Q86SU0 546 aaPredicted RBP9.19□□□□□ -0.94
CCL16-206ENST00000613642 L3MBTL3Q96JM7 780 aaPredicted RBP9.17□□□□□ -0.94
CCL16-206ENST00000613642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCL16-206ENST00000613642 CDAN1Q8IWY9 1227 aa9.15□□□□□ -0.94
CCL16-206ENST00000613642 SNPHO15079 494 aa9.14□□□□□ -0.95
CCL16-206ENST00000613642 TRIM41Q8WV44 630 aa9.12□□□□□ -0.95
CCL16-206ENST00000613642 TMEM121BQ9BXQ6 578 aaPredicted RBP9.12□□□□□ -0.95
CCL16-206ENST00000613642 CABP2Q9NPB3 220 aa9.12□□□□□ -0.95
CCL16-206ENST00000613642 C3orf67Q6ZVT6 689 aa9.11□□□□□ -0.95
CCL16-206ENST00000613642 DPY19L2Q6NUT2 758 aa9.1□□□□□ -0.95
CCL16-206ENST00000613642 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
CCL16-206ENST00000613642 MARVELD3Q96A59 401 aa9.03□□□□□ -0.96
CCL16-206ENST00000613642 EIF5BO60841 1220 aaKnown RBP9.02□□□□□ -0.97
CCL16-206ENST00000613642 EFCAB3Q8N7B9 438 aa9.02□□□□□ -0.97
CCL16-206ENST00000613642 RNF25Q96BH1 459 aaPredicted RBP9.01□□□□□ -0.97
CCL16-206ENST00000613642 BCL11AQ9H165 835 aa9□□□□□ -0.97
CCL16-206ENST00000613642 G3V3G9 751 aa8.99□□□□□ -0.97
CCL16-206ENST00000613642 ARXQ96QS3 562 aa8.99□□□□□ -0.97
CCL16-206ENST00000613642 RIOK3O14730 519 aaKnown RBP8.98□□□□□ -0.97
CCL16-206ENST00000613642 HOXB3P14651 431 aaPredicted RBP8.96□□□□□ -0.98
CCL16-206ENST00000613642 EMP3P54852 163 aa8.96□□□□□ -0.98
CCL16-206ENST00000613642 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.95□□□□□ -0.98
CCL16-206ENST00000613642 VGFO15240 615 aaPredicted RBP8.95□□□□□ -0.98
CCL16-206ENST00000613642 SOX12O15370 315 aa8.95□□□□□ -0.98
CCL16-206ENST00000613642 ZFP91Q96JP5 570 aaPredicted RBP8.95□□□□□ -0.98
CCL16-206ENST00000613642 POTEB3A0JP26 581 aa8.94□□□□□ -0.98
CCL16-206ENST00000613642 POTEBQ6S5H4 581 aa8.94□□□□□ -0.98
CCL16-206ENST00000613642 SPNS2Q8IVW8 549 aa8.94□□□□□ -0.98
CCL16-206ENST00000613642 RANGAP1P46060 587 aaPredicted RBP8.93□□□□□ -0.98
CCL16-206ENST00000613642 MS4A4AQ96JQ5 239 aa8.92□□□□□ -0.98
CCL16-206ENST00000613642 HS3ST6Q96QI5 342 aa8.92□□□□□ -0.98
CCL16-206ENST00000613642 FAM205CA6NFA0 338 aa8.91□□□□□ -0.98
CCL16-206ENST00000613642 MICALL2Q8IY33 904 aa8.91□□□□□ -0.98
CCL16-206ENST00000613642 MMRN1Q13201 1228 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms