RNA–Protein interactions for RNA: ENST00000608682.1

AP004247.3-201, humanhuman

BASIC

Gene AP004247.3, Length 624 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.3-201ENST00000608682 CLEC11AQ9Y240 323 aa9.73□□□□□ -0.85
AP004247.3-201ENST00000608682 NUBP1P53384 320 aa9.72□□□□□ -0.85
AP004247.3-201ENST00000608682 REM2Q8IYK8 340 aaPredicted RBP9.71□□□□□ -0.86
AP004247.3-201ENST00000608682 RNF25Q96BH1 459 aaPredicted RBP9.71□□□□□ -0.86
AP004247.3-201ENST00000608682 HS6ST3Q8IZP7 471 aa9.7□□□□□ -0.86
AP004247.3-201ENST00000608682 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
AP004247.3-201ENST00000608682 CREBZFQ9NS37 354 aa9.67□□□□□ -0.86
AP004247.3-201ENST00000608682 RIOK3O14730 519 aaKnown RBP9.65□□□□□ -0.86
AP004247.3-201ENST00000608682 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
AP004247.3-201ENST00000608682 TPRNQ4KMQ1 711 aa9.63□□□□□ -0.87
AP004247.3-201ENST00000608682 MNX1P50219 401 aaPredicted RBP9.6□□□□□ -0.87
AP004247.3-201ENST00000608682 NKX1-1Q15270 411 aaPredicted RBP9.6□□□□□ -0.87
AP004247.3-201ENST00000608682 STK25O00506 426 aa9.59□□□□□ -0.87
AP004247.3-201ENST00000608682 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
AP004247.3-201ENST00000608682 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
AP004247.3-201ENST00000608682 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
AP004247.3-201ENST00000608682 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
AP004247.3-201ENST00000608682 GTPBP6O43824 516 aaPredicted RBP9.54□□□□□ -0.88
AP004247.3-201ENST00000608682 PYGBP11216 843 aa9.53□□□□□ -0.88
AP004247.3-201ENST00000608682 CHRM1P11229 460 aaPredicted RBP9.53□□□□□ -0.88
AP004247.3-201ENST00000608682 NBR1Q14596 966 aa9.53□□□□□ -0.88
AP004247.3-201ENST00000608682 STK24Q9Y6E0 443 aa9.52□□□□□ -0.89
AP004247.3-201ENST00000608682 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.51□□□□□ -0.89
AP004247.3-201ENST00000608682 ZFP91Q96JP5 570 aaPredicted RBP9.51□□□□□ -0.89
AP004247.3-201ENST00000608682 BCL11BQ9C0K0 894 aaPredicted RBP9.51□□□□□ -0.89
AP004247.3-201ENST00000608682 SGIP1Q9BQI5 828 aa9.45□□□□□ -0.9
AP004247.3-201ENST00000608682 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
AP004247.3-201ENST00000608682 TSPYL2Q9H2G4 693 aaPredicted RBP9.44□□□□□ -0.9
AP004247.3-201ENST00000608682 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
AP004247.3-201ENST00000608682 RYDENQ9NUL5 291 aaKnown RBP9.4□□□□□ -0.9
AP004247.3-201ENST00000608682 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
AP004247.3-201ENST00000608682 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
AP004247.3-201ENST00000608682 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
AP004247.3-201ENST00000608682 ZNF467Q7Z7K2 595 aaPredicted RBP9.35□□□□□ -0.91
AP004247.3-201ENST00000608682 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
AP004247.3-201ENST00000608682 PCDHB13Q9Y5F0 798 aa9.35□□□□□ -0.91
AP004247.3-201ENST00000608682 PDAP1Q13442 181 aaKnown RBP9.32□□□□□ -0.92
AP004247.3-201ENST00000608682 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
AP004247.3-201ENST00000608682 PSEN1P49768 467 aa9.28□□□□□ -0.92
AP004247.3-201ENST00000608682 CADPS2Q86UW7 1296 aa9.28□□□□□ -0.92
AP004247.3-201ENST00000608682 POTEHQ6S545 545 aa9.27□□□□□ -0.93
AP004247.3-201ENST00000608682 CCDC61Q9Y6R9 512 aa9.27□□□□□ -0.93
AP004247.3-201ENST00000608682 WDR70Q9NW82 654 aa9.26□□□□□ -0.93
AP004247.3-201ENST00000608682 P3H3Q8IVL6 736 aa9.24□□□□□ -0.93
AP004247.3-201ENST00000608682 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
AP004247.3-201ENST00000608682 MFRPQ9BY79 579 aa9.23□□□□□ -0.93
AP004247.3-201ENST00000608682 PAK3O75914 559 aaPredicted RBP9.22□□□□□ -0.93
AP004247.3-201ENST00000608682 IFNL1Q8IU54 200 aa9.21□□□□□ -0.94
AP004247.3-201ENST00000608682 KCNV2Q8TDN2 545 aa9.2□□□□□ -0.94
AP004247.3-201ENST00000608682 MAP3K13O43283 966 aa9.19□□□□□ -0.94
AP004247.3-201ENST00000608682 PPP1R37O75864 691 aa9.18□□□□□ -0.94
AP004247.3-201ENST00000608682 EFCAB3Q8N7B9 438 aa9.18□□□□□ -0.94
AP004247.3-201ENST00000608682 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
AP004247.3-201ENST00000608682 KIF12Q96FN5 646 aa9.16□□□□□ -0.94
AP004247.3-201ENST00000608682 PHF8Q9UPP1 1060 aa9.15□□□□□ -0.94
AP004247.3-201ENST00000608682 NLRP6P59044 892 aa9.14□□□□□ -0.95
AP004247.3-201ENST00000608682 FBXO22Q8NEZ5 403 aa9.13□□□□□ -0.95
AP004247.3-201ENST00000608682 CD44P16070 742 aaKnown RBP9.12□□□□□ -0.95
AP004247.3-201ENST00000608682 SOX12O15370 315 aa9.11□□□□□ -0.95
AP004247.3-201ENST00000608682 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
AP004247.3-201ENST00000608682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.1□□□□□ -0.95
AP004247.3-201ENST00000608682 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
AP004247.3-201ENST00000608682 PHF12Q96QT6 1004 aa9.08□□□□□ -0.96
AP004247.3-201ENST00000608682 E2F4Q16254 413 aa9.07□□□□□ -0.96
AP004247.3-201ENST00000608682 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
AP004247.3-201ENST00000608682 ARHGEF1Q92888 912 aaKnown RBP9.06□□□□□ -0.96
AP004247.3-201ENST00000608682 C19orf67A6NJJ6 358 aa9.04□□□□□ -0.96
AP004247.3-201ENST00000608682 GOLGA2Q08379 1002 aa9.03□□□□□ -0.96
AP004247.3-201ENST00000608682 MS4A4AQ96JQ5 239 aa9.03□□□□□ -0.96
AP004247.3-201ENST00000608682 LARP6Q9BRS8 491 aaKnown RBP9.03□□□□□ -0.96
AP004247.3-201ENST00000608682 SEMA3EO15041 775 aa9.02□□□□□ -0.97
AP004247.3-201ENST00000608682 TMEM106CQ9BVX2 250 aa9.02□□□□□ -0.97
AP004247.3-201ENST00000608682 NCKAP5LQ9HCH0 1330 aa9.02□□□□□ -0.97
AP004247.3-201ENST00000608682 GTF3C3Q9Y5Q9 886 aa9.01□□□□□ -0.97
AP004247.3-201ENST00000608682 HAX1O00165 279 aa9□□□□□ -0.97
AP004247.3-201ENST00000608682 PDE4AP27815 886 aa8.99□□□□□ -0.97
AP004247.3-201ENST00000608682 TRPC6Q9Y210 931 aa8.98□□□□□ -0.97
AP004247.3-201ENST00000608682 TESPA1A2RU30 521 aaPredicted RBP8.97□□□□□ -0.97
AP004247.3-201ENST00000608682 TIMELESSQ9UNS1 1208 aa8.97□□□□□ -0.97
AP004247.3-201ENST00000608682 MKRN3Q13064 507 aaKnown RBP8.96□□□□□ -0.98
AP004247.3-201ENST00000608682 TMEM132AQ24JP5 1023 aa8.96□□□□□ -0.98
AP004247.3-201ENST00000608682 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.98
AP004247.3-201ENST00000608682 MS4A3Q96HJ5 214 aa8.96□□□□□ -0.98
AP004247.3-201ENST00000608682 DDX27Q96GQ7 796 aaKnown RBP8.95□□□□□ -0.98
AP004247.3-201ENST00000608682 MFSD10Q14728 455 aa8.94□□□□□ -0.98
AP004247.3-201ENST00000608682 CRISPLD2Q9H0B8 497 aa8.94□□□□□ -0.98
AP004247.3-201ENST00000608682 CLCN6P51797 869 aa8.92□□□□□ -0.98
AP004247.3-201ENST00000608682 BRPF1P55201 1214 aaPredicted RBP8.91□□□□□ -0.98
AP004247.3-201ENST00000608682 SMYD5Q6GMV2 418 aa8.9□□□□□ -0.98
AP004247.3-201ENST00000608682 SLC24A3Q9HC58 644 aa8.9□□□□□ -0.98
AP004247.3-201ENST00000608682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.99
AP004247.3-201ENST00000608682 NEUROD2Q15784 382 aa8.88□□□□□ -0.99
AP004247.3-201ENST00000608682 TTLL13PA6NNM8 815 aa8.87□□□□□ -0.99
AP004247.3-201ENST00000608682 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
AP004247.3-201ENST00000608682 TIE1P35590 1138 aa8.85□□□□□ -0.99
AP004247.3-201ENST00000608682 EVX2Q03828 476 aa8.85□□□□□ -0.99
AP004247.3-201ENST00000608682 PPP1R15BQ5SWA1 713 aa8.85□□□□□ -0.99
AP004247.3-201ENST00000608682 ARIH1Q9Y4X5 557 aaPredicted RBP8.85□□□□□ -0.99
AP004247.3-201ENST00000608682 BMP2KQ9NSY1 1161 aaPredicted RBP8.84□□□□□ -0.99
AP004247.3-201ENST00000608682 ZMYND10O75800 440 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms