RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 CCDC61Q9Y6R9 512 aa14.64□□□□□ -0.07
UCHL3-205ENST00000607339 FAM212AQ96EL1 285 aa14.61□□□□□ -0.07
UCHL3-205ENST00000607339 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
UCHL3-205ENST00000607339 MS4A3Q96HJ5 214 aa14.57□□□□□ -0.08
UCHL3-205ENST00000607339 VASPP50552 380 aaPredicted RBP14.54□□□□□ -0.08
UCHL3-205ENST00000607339 KIF12Q96FN5 646 aa14.54□□□□□ -0.08
UCHL3-205ENST00000607339 NUBP1P53384 320 aa14.53□□□□□ -0.08
UCHL3-205ENST00000607339 SGIP1Q9BQI5 828 aa14.53□□□□□ -0.08
UCHL3-205ENST00000607339 ASTLQ6HA08 431 aaPredicted RBP14.49□□□□□ -0.09
UCHL3-205ENST00000607339 KLHL34Q8N239 644 aa14.47□□□□□ -0.09
UCHL3-205ENST00000607339 SLC39A7Q92504 469 aa14.45□□□□□ -0.1
UCHL3-205ENST00000607339 MAP3K13O43283 966 aa14.43□□□□□ -0.1
UCHL3-205ENST00000607339 TIE1P35590 1138 aa14.43□□□□□ -0.1
UCHL3-205ENST00000607339 ATMINO43313 823 aaPredicted RBP14.42□□□□□ -0.1
UCHL3-205ENST00000607339 C7P10643 843 aa14.42□□□□□ -0.1
UCHL3-205ENST00000607339 PLSCR2Q9NRY7 297 aa14.42□□□□□ -0.1
UCHL3-205ENST00000607339 PCDHB13Q9Y5F0 798 aa14.41□□□□□ -0.1
UCHL3-205ENST00000607339 GSE1Q14687 1217 aa14.4□□□□□ -0.1
UCHL3-205ENST00000607339 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
UCHL3-205ENST00000607339 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
UCHL3-205ENST00000607339 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
UCHL3-205ENST00000607339 BMP2KQ9NSY1 1161 aaPredicted RBP14.32□□□□□ -0.12
UCHL3-205ENST00000607339 ATN1P54259 1190 aaPredicted RBP14.29□□□□□ -0.12
UCHL3-205ENST00000607339 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
UCHL3-205ENST00000607339 MAMSTRQ6ZN01 415 aa14.27□□□□□ -0.13
UCHL3-205ENST00000607339 SPOCK2Q92563 424 aa14.27□□□□□ -0.13
UCHL3-205ENST00000607339 POTEB2H3BUK9 544 aa14.26□□□□□ -0.13
UCHL3-205ENST00000607339 TTLL13PA6NNM8 815 aa14.25□□□□□ -0.13
UCHL3-205ENST00000607339 IER5LQ5T953 404 aa14.25□□□□□ -0.13
UCHL3-205ENST00000607339 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
UCHL3-205ENST00000607339 PYGBP11216 843 aa14.22□□□□□ -0.13
UCHL3-205ENST00000607339 ZNF467Q7Z7K2 595 aaPredicted RBP14.22□□□□□ -0.13
UCHL3-205ENST00000607339 TRPC6Q9Y210 931 aa14.2□□□□□ -0.14
UCHL3-205ENST00000607339 SEC24BO95487 1268 aa14.19□□□□□ -0.14
UCHL3-205ENST00000607339 CHRM1P11229 460 aaPredicted RBP14.19□□□□□ -0.14
UCHL3-205ENST00000607339 TMEM106CQ9BVX2 250 aa14.18□□□□□ -0.14
UCHL3-205ENST00000607339 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
UCHL3-205ENST00000607339 IFNLR1Q8IU57 520 aaPredicted RBP14.17□□□□□ -0.14
UCHL3-205ENST00000607339 POTEMA6NI47 508 aa14.16□□□□□ -0.14
UCHL3-205ENST00000607339 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
UCHL3-205ENST00000607339 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
UCHL3-205ENST00000607339 POTEGQ6S5H5 508 aa14.11□□□□□ -0.15
UCHL3-205ENST00000607339 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
UCHL3-205ENST00000607339 PLCG2P16885 1265 aa14.07□□□□□ -0.16
UCHL3-205ENST00000607339 GOLGA2Q08379 1002 aa14.06□□□□□ -0.16
UCHL3-205ENST00000607339 PCDH10Q9P2E7 1040 aa14.06□□□□□ -0.16
UCHL3-205ENST00000607339 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
UCHL3-205ENST00000607339 PDAP1Q13442 181 aaKnown RBP13.99□□□□□ -0.17
UCHL3-205ENST00000607339 POTEFA5A3E0 1075 aa13.98□□□□□ -0.17
UCHL3-205ENST00000607339 OCEL1Q9H607 264 aa13.98□□□□□ -0.17
UCHL3-205ENST00000607339 COLQQ9Y215 455 aaPredicted RBP13.98□□□□□ -0.17
UCHL3-205ENST00000607339 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
UCHL3-205ENST00000607339 PSEN1P49768 467 aa13.97□□□□□ -0.17
UCHL3-205ENST00000607339 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
UCHL3-205ENST00000607339 IRX5P78411 483 aaPredicted RBP13.95□□□□□ -0.18
UCHL3-205ENST00000607339 FAM163AQ96GL9 167 aaPredicted RBP13.87□□□□□ -0.19
UCHL3-205ENST00000607339 TAOK2Q9UL54 1235 aa13.86□□□□□ -0.19
UCHL3-205ENST00000607339 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
UCHL3-205ENST00000607339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.2
UCHL3-205ENST00000607339 LCE2DQ5TA82 110 aaPredicted RBP13.8□□□□□ -0.2
UCHL3-205ENST00000607339 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.79□□□□□ -0.2
UCHL3-205ENST00000607339 RIOK3O14730 519 aaKnown RBP13.78□□□□□ -0.2
UCHL3-205ENST00000607339 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
UCHL3-205ENST00000607339 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.21
UCHL3-205ENST00000607339 CABP2Q9NPB3 220 aa13.77□□□□□ -0.21
UCHL3-205ENST00000607339 G3V3G9 751 aa13.76□□□□□ -0.21
UCHL3-205ENST00000607339 VGFO15240 615 aaPredicted RBP13.75□□□□□ -0.21
UCHL3-205ENST00000607339 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
UCHL3-205ENST00000607339 SNPHO15079 494 aa13.73□□□□□ -0.21
UCHL3-205ENST00000607339 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
UCHL3-205ENST00000607339 SOX12O15370 315 aa13.63□□□□□ -0.23
UCHL3-205ENST00000607339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
UCHL3-205ENST00000607339 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
UCHL3-205ENST00000607339 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
UCHL3-205ENST00000607339 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
UCHL3-205ENST00000607339 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
UCHL3-205ENST00000607339 EFCAB3Q8N7B9 438 aa13.59□□□□□ -0.23
UCHL3-205ENST00000607339 TMEM121BQ9BXQ6 578 aaPredicted RBP13.59□□□□□ -0.23
UCHL3-205ENST00000607339 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
UCHL3-205ENST00000607339 ST18O60284 1047 aa13.5□□□□□ -0.25
UCHL3-205ENST00000607339 NLRP6P59044 892 aa13.49□□□□□ -0.25
UCHL3-205ENST00000607339 DPY19L2Q6NUT2 758 aa13.49□□□□□ -0.25
UCHL3-205ENST00000607339 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
UCHL3-205ENST00000607339 STK24Q9Y6E0 443 aa13.48□□□□□ -0.25
UCHL3-205ENST00000607339 STK25O00506 426 aa13.47□□□□□ -0.25
UCHL3-205ENST00000607339 PKD2Q13563 968 aa13.45□□□□□ -0.26
UCHL3-205ENST00000607339 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
UCHL3-205ENST00000607339 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
UCHL3-205ENST00000607339 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
UCHL3-205ENST00000607339 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
UCHL3-205ENST00000607339 RGL2O15211 777 aa13.37□□□□□ -0.27
UCHL3-205ENST00000607339 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
UCHL3-205ENST00000607339 MS4A4AQ96JQ5 239 aa13.34□□□□□ -0.27
UCHL3-205ENST00000607339 EMP3P54852 163 aa13.33□□□□□ -0.28
UCHL3-205ENST00000607339 FBXO22Q8NEZ5 403 aa13.32□□□□□ -0.28
UCHL3-205ENST00000607339 MFRPQ9BY79 579 aa13.29□□□□□ -0.28
UCHL3-205ENST00000607339 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
UCHL3-205ENST00000607339 MARVELD3Q96A59 401 aa13.26□□□□□ -0.29
UCHL3-205ENST00000607339 MMRN1Q13201 1228 aa13.25□□□□□ -0.29
UCHL3-205ENST00000607339 SPNS2Q8IVW8 549 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms