RNA–Protein interactions for RNA: ENST00000606102.1

HMGN2P28-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 28, humanhuman

BASIC

Gene HMGN2P28, Length 262 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P28-201ENST00000606102 CCDC61Q9Y6R9 512 aa8.67□□□□□ -1.02
HMGN2P28-201ENST00000606102 CLCN6P51797 869 aa8.62□□□□□ -1.03
HMGN2P28-201ENST00000606102 MS4A3Q96HJ5 214 aa8.62□□□□□ -1.03
HMGN2P28-201ENST00000606102 ZBTB47Q9UFB7 747 aaPredicted RBP8.6□□□□□ -1.03
HMGN2P28-201ENST00000606102 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
HMGN2P28-201ENST00000606102 MAP3K13O43283 966 aa8.56□□□□□ -1.04
HMGN2P28-201ENST00000606102 IFNLR1Q8IU57 520 aaPredicted RBP8.56□□□□□ -1.04
HMGN2P28-201ENST00000606102 DCBLD2Q96PD2 775 aa8.56□□□□□ -1.04
HMGN2P28-201ENST00000606102 TRPC6Q9Y210 931 aa8.56□□□□□ -1.04
HMGN2P28-201ENST00000606102 PELP1Q8IZL8 1130 aaKnown RBP8.54□□□□□ -1.04
HMGN2P28-201ENST00000606102 KLHL34Q8N239 644 aa8.53□□□□□ -1.04
HMGN2P28-201ENST00000606102 FAM212AQ96EL1 285 aa8.52□□□□□ -1.05
HMGN2P28-201ENST00000606102 ATMINO43313 823 aaPredicted RBP8.49□□□□□ -1.05
HMGN2P28-201ENST00000606102 DCAF8Q5TAQ9 597 aa8.49□□□□□ -1.05
HMGN2P28-201ENST00000606102 ASTLQ6HA08 431 aaPredicted RBP8.49□□□□□ -1.05
HMGN2P28-201ENST00000606102 BMP2KQ9NSY1 1161 aaPredicted RBP8.47□□□□□ -1.05
HMGN2P28-201ENST00000606102 PYGBP11216 843 aa8.46□□□□□ -1.06
HMGN2P28-201ENST00000606102 ATN1P54259 1190 aaPredicted RBP8.46□□□□□ -1.06
HMGN2P28-201ENST00000606102 LHX8Q68G74 356 aa8.46□□□□□ -1.06
HMGN2P28-201ENST00000606102 IFNL1Q8IU54 200 aa8.46□□□□□ -1.06
HMGN2P28-201ENST00000606102 PCDHB13Q9Y5F0 798 aa8.46□□□□□ -1.06
HMGN2P28-201ENST00000606102 SPOCK2Q92563 424 aa8.45□□□□□ -1.06
HMGN2P28-201ENST00000606102 POTEB2H3BUK9 544 aa8.43□□□□□ -1.06
HMGN2P28-201ENST00000606102 SGIP1Q9BQI5 828 aa8.43□□□□□ -1.06
HMGN2P28-201ENST00000606102 TIE1P35590 1138 aa8.42□□□□□ -1.06
HMGN2P28-201ENST00000606102 TTLL13PA6NNM8 815 aa8.41□□□□□ -1.06
HMGN2P28-201ENST00000606102 AMER1Q5JTC6 1135 aaPredicted RBP8.41□□□□□ -1.06
HMGN2P28-201ENST00000606102 GSE1Q14687 1217 aa8.4□□□□□ -1.06
HMGN2P28-201ENST00000606102 METRNQ9UJH8 293 aa8.39□□□□□ -1.07
HMGN2P28-201ENST00000606102 PCDHB8Q9UN66 801 aa8.39□□□□□ -1.07
HMGN2P28-201ENST00000606102 POTEFA5A3E0 1075 aa8.38□□□□□ -1.07
HMGN2P28-201ENST00000606102 SLC39A7Q92504 469 aa8.37□□□□□ -1.07
HMGN2P28-201ENST00000606102 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
HMGN2P28-201ENST00000606102 POTEJP0CG39 1038 aa8.35□□□□□ -1.07
HMGN2P28-201ENST00000606102 CHRM1P11229 460 aaPredicted RBP8.35□□□□□ -1.07
HMGN2P28-201ENST00000606102 TMEM106CQ9BVX2 250 aa8.35□□□□□ -1.07
HMGN2P28-201ENST00000606102 C7P10643 843 aa8.34□□□□□ -1.07
HMGN2P28-201ENST00000606102 TRIM35Q9UPQ4 493 aa8.34□□□□□ -1.07
HMGN2P28-201ENST00000606102 COLQQ9Y215 455 aaPredicted RBP8.32□□□□□ -1.08
HMGN2P28-201ENST00000606102 OTUD5Q96G74 571 aa8.31□□□□□ -1.08
HMGN2P28-201ENST00000606102 ZNF467Q7Z7K2 595 aaPredicted RBP8.29□□□□□ -1.08
HMGN2P28-201ENST00000606102 PSEN1P49768 467 aa8.25□□□□□ -1.09
HMGN2P28-201ENST00000606102 IER5LQ5T953 404 aa8.25□□□□□ -1.09
HMGN2P28-201ENST00000606102 RNF25Q96BH1 459 aaPredicted RBP8.25□□□□□ -1.09
HMGN2P28-201ENST00000606102 IRX5P78411 483 aaPredicted RBP8.24□□□□□ -1.09
HMGN2P28-201ENST00000606102 PDAP1Q13442 181 aaKnown RBP8.22□□□□□ -1.09
HMGN2P28-201ENST00000606102 SEC24BO95487 1268 aa8.21□□□□□ -1.1
HMGN2P28-201ENST00000606102 TRIM41Q8WV44 630 aa8.21□□□□□ -1.1
HMGN2P28-201ENST00000606102 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
HMGN2P28-201ENST00000606102 PLCG2P16885 1265 aa8.17□□□□□ -1.1
HMGN2P28-201ENST00000606102 PKD2Q13563 968 aa8.17□□□□□ -1.1
HMGN2P28-201ENST00000606102 PDCD7Q8N8D1 485 aaKnown RBP8.17□□□□□ -1.1
HMGN2P28-201ENST00000606102 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
HMGN2P28-201ENST00000606102 RIOK3O14730 519 aaKnown RBP8.15□□□□□ -1.1
HMGN2P28-201ENST00000606102 CABP2Q9NPB3 220 aa8.15□□□□□ -1.1
HMGN2P28-201ENST00000606102 MKRN3Q13064 507 aaKnown RBP8.13□□□□□ -1.11
HMGN2P28-201ENST00000606102 MAMSTRQ6ZN01 415 aa8.13□□□□□ -1.11
HMGN2P28-201ENST00000606102 ILDR1Q86SU0 546 aaPredicted RBP8.13□□□□□ -1.11
HMGN2P28-201ENST00000606102 SCUBE2Q9NQ36 999 aa8.13□□□□□ -1.11
HMGN2P28-201ENST00000606102 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
HMGN2P28-201ENST00000606102 ZFP91Q96JP5 570 aaPredicted RBP8.12□□□□□ -1.11
HMGN2P28-201ENST00000606102 ECM2O94769 699 aaPredicted RBP8.11□□□□□ -1.11
HMGN2P28-201ENST00000606102 GOLGA2Q08379 1002 aa8.11□□□□□ -1.11
HMGN2P28-201ENST00000606102 DPY19L2Q6NUT2 758 aa8.11□□□□□ -1.11
HMGN2P28-201ENST00000606102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMGN2P28-201ENST00000606102 RGL2O15211 777 aa8.1□□□□□ -1.11
HMGN2P28-201ENST00000606102 VGFO15240 615 aaPredicted RBP8.09□□□□□ -1.11
HMGN2P28-201ENST00000606102 EFCAB3Q8N7B9 438 aa8.09□□□□□ -1.11
HMGN2P28-201ENST00000606102 LCE2DQ5TA82 110 aaPredicted RBP8.08□□□□□ -1.12
HMGN2P28-201ENST00000606102 SLAIN1Q8ND83 568 aa8.04□□□□□ -1.12
HMGN2P28-201ENST00000606102 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
HMGN2P28-201ENST00000606102 BCL11BQ9C0K0 894 aaPredicted RBP8.03□□□□□ -1.12
HMGN2P28-201ENST00000606102 PHF8Q9UPP1 1060 aa8.02□□□□□ -1.13
HMGN2P28-201ENST00000606102 L3MBTL3Q96JM7 780 aaPredicted RBP8□□□□□ -1.13
HMGN2P28-201ENST00000606102 STK24Q9Y6E0 443 aa8□□□□□ -1.13
HMGN2P28-201ENST00000606102 FAM163AQ96GL9 167 aaPredicted RBP7.99□□□□□ -1.13
HMGN2P28-201ENST00000606102 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.99□□□□□ -1.13
HMGN2P28-201ENST00000606102 STK25O00506 426 aa7.98□□□□□ -1.13
HMGN2P28-201ENST00000606102 SOX12O15370 315 aa7.98□□□□□ -1.13
HMGN2P28-201ENST00000606102 BOLA1Q9Y3E2 137 aa7.98□□□□□ -1.13
HMGN2P28-201ENST00000606102 FBXO22Q8NEZ5 403 aa7.97□□□□□ -1.13
HMGN2P28-201ENST00000606102 POTEMA6NI47 508 aa7.96□□□□□ -1.14
HMGN2P28-201ENST00000606102 C3orf67Q6ZVT6 689 aa7.96□□□□□ -1.14
HMGN2P28-201ENST00000606102 TMEM121BQ9BXQ6 578 aaPredicted RBP7.96□□□□□ -1.14
HMGN2P28-201ENST00000606102 MFRPQ9BY79 579 aa7.96□□□□□ -1.14
HMGN2P28-201ENST00000606102 POTEGQ6S5H5 508 aa7.95□□□□□ -1.14
HMGN2P28-201ENST00000606102 TAOK2Q9UL54 1235 aa7.94□□□□□ -1.14
HMGN2P28-201ENST00000606102 TMEM92Q6UXU6 159 aa7.93□□□□□ -1.14
HMGN2P28-201ENST00000606102 MICALL2Q8IY33 904 aa7.93□□□□□ -1.14
HMGN2P28-201ENST00000606102 ST18O60284 1047 aa7.92□□□□□ -1.14
HMGN2P28-201ENST00000606102 NLRP6P59044 892 aa7.91□□□□□ -1.14
HMGN2P28-201ENST00000606102 HS6ST3Q8IZP7 471 aa7.89□□□□□ -1.15
HMGN2P28-201ENST00000606102 G3V3G9 751 aa7.88□□□□□ -1.15
HMGN2P28-201ENST00000606102 PPP1R37O75864 691 aa7.87□□□□□ -1.15
HMGN2P28-201ENST00000606102 HOXB3P14651 431 aaPredicted RBP7.87□□□□□ -1.15
HMGN2P28-201ENST00000606102 CHGAP10645 457 aaKnown RBP7.86□□□□□ -1.15
HMGN2P28-201ENST00000606102 NKX1-1Q15270 411 aaPredicted RBP7.84□□□□□ -1.15
HMGN2P28-201ENST00000606102 SNPHO15079 494 aa7.83□□□□□ -1.16
HMGN2P28-201ENST00000606102 MARVELD3Q96A59 401 aa7.82□□□□□ -1.16
HMGN2P28-201ENST00000606102 DNAJC5Q9H3Z4 198 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms