RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
HMGB1P51-201ENST00000605166 EVX2Q03828 476 aa12.34□□□□□ -0.43
HMGB1P51-201ENST00000605166 BCANQ96GW7 911 aa12.34□□□□□ -0.43
HMGB1P51-201ENST00000605166 CLCN6P51797 869 aa12.32□□□□□ -0.44
HMGB1P51-201ENST00000605166 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
HMGB1P51-201ENST00000605166 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
HMGB1P51-201ENST00000605166 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P51-201ENST00000605166 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
HMGB1P51-201ENST00000605166 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
HMGB1P51-201ENST00000605166 GABBR2O75899 941 aa12.19□□□□□ -0.46
HMGB1P51-201ENST00000605166 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P51-201ENST00000605166 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P51-201ENST00000605166 RGL2O15211 777 aa12.15□□□□□ -0.46
HMGB1P51-201ENST00000605166 CFAP44Q96MT7 982 aa12.13□□□□□ -0.47
HMGB1P51-201ENST00000605166 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
HMGB1P51-201ENST00000605166 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
HMGB1P51-201ENST00000605166 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
HMGB1P51-201ENST00000605166 NUBP1P53384 320 aa12.1□□□□□ -0.47
HMGB1P51-201ENST00000605166 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
HMGB1P51-201ENST00000605166 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
HMGB1P51-201ENST00000605166 PRKCSHP14314 528 aaPredicted RBP12.07□□□□□ -0.48
HMGB1P51-201ENST00000605166 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
HMGB1P51-201ENST00000605166 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
HMGB1P51-201ENST00000605166 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
HMGB1P51-201ENST00000605166 CIZ1Q9ULV3 898 aaPredicted RBP12.04□□□□□ -0.48
HMGB1P51-201ENST00000605166 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
HMGB1P51-201ENST00000605166 GSE1Q14687 1217 aa12.02□□□□□ -0.49
HMGB1P51-201ENST00000605166 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
HMGB1P51-201ENST00000605166 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
HMGB1P51-201ENST00000605166 KIF12Q96FN5 646 aa11.99□□□□□ -0.49
HMGB1P51-201ENST00000605166 GALR2O43603 387 aaPredicted RBP11.98□□□□□ -0.49
HMGB1P51-201ENST00000605166 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
HMGB1P51-201ENST00000605166 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
HMGB1P51-201ENST00000605166 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
HMGB1P51-201ENST00000605166 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
HMGB1P51-201ENST00000605166 MAP3K13O43283 966 aa11.92□□□□□ -0.5
HMGB1P51-201ENST00000605166 HS6ST3Q8IZP7 471 aa11.92□□□□□ -0.5
HMGB1P51-201ENST00000605166 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
HMGB1P51-201ENST00000605166 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
HMGB1P51-201ENST00000605166 PYGBP11216 843 aa11.86□□□□□ -0.51
HMGB1P51-201ENST00000605166 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
HMGB1P51-201ENST00000605166 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
HMGB1P51-201ENST00000605166 RNF25Q96BH1 459 aaPredicted RBP11.82□□□□□ -0.52
HMGB1P51-201ENST00000605166 TIE1P35590 1138 aa11.81□□□□□ -0.52
HMGB1P51-201ENST00000605166 ASTLQ6HA08 431 aaPredicted RBP11.81□□□□□ -0.52
HMGB1P51-201ENST00000605166 ZNF467Q7Z7K2 595 aaPredicted RBP11.79□□□□□ -0.52
HMGB1P51-201ENST00000605166 IFNL1Q8IU54 200 aa11.79□□□□□ -0.52
HMGB1P51-201ENST00000605166 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P51-201ENST00000605166 NBR1Q14596 966 aa11.77□□□□□ -0.53
HMGB1P51-201ENST00000605166 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
HMGB1P51-201ENST00000605166 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
HMGB1P51-201ENST00000605166 BMP2KQ9NSY1 1161 aaPredicted RBP11.74□□□□□ -0.53
HMGB1P51-201ENST00000605166 C7P10643 843 aa11.73□□□□□ -0.53
HMGB1P51-201ENST00000605166 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
HMGB1P51-201ENST00000605166 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
HMGB1P51-201ENST00000605166 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
HMGB1P51-201ENST00000605166 TMEM106CQ9BVX2 250 aa11.71□□□□□ -0.53
HMGB1P51-201ENST00000605166 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.53
HMGB1P51-201ENST00000605166 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
HMGB1P51-201ENST00000605166 LHX8Q68G74 356 aa11.7□□□□□ -0.54
HMGB1P51-201ENST00000605166 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
HMGB1P51-201ENST00000605166 PELP1Q8IZL8 1130 aaKnown RBP11.68□□□□□ -0.54
HMGB1P51-201ENST00000605166 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
HMGB1P51-201ENST00000605166 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
HMGB1P51-201ENST00000605166 STK25O00506 426 aa11.65□□□□□ -0.54
HMGB1P51-201ENST00000605166 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
HMGB1P51-201ENST00000605166 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
HMGB1P51-201ENST00000605166 IER5LQ5T953 404 aa11.64□□□□□ -0.55
HMGB1P51-201ENST00000605166 PSEN1P49768 467 aa11.62□□□□□ -0.55
HMGB1P51-201ENST00000605166 SEC24BO95487 1268 aa11.61□□□□□ -0.55
HMGB1P51-201ENST00000605166 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
HMGB1P51-201ENST00000605166 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
HMGB1P51-201ENST00000605166 MKRN3Q13064 507 aaKnown RBP11.55□□□□□ -0.56
HMGB1P51-201ENST00000605166 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.54□□□□□ -0.56
HMGB1P51-201ENST00000605166 ZFP91Q96JP5 570 aaPredicted RBP11.54□□□□□ -0.56
HMGB1P51-201ENST00000605166 BCL11BQ9C0K0 894 aaPredicted RBP11.54□□□□□ -0.56
HMGB1P51-201ENST00000605166 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
HMGB1P51-201ENST00000605166 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
HMGB1P51-201ENST00000605166 PLCG2P16885 1265 aa11.52□□□□□ -0.57
HMGB1P51-201ENST00000605166 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
HMGB1P51-201ENST00000605166 POTEB2H3BUK9 544 aa11.46□□□□□ -0.57
HMGB1P51-201ENST00000605166 IRX5P78411 483 aaPredicted RBP11.46□□□□□ -0.57
HMGB1P51-201ENST00000605166 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
HMGB1P51-201ENST00000605166 COLQQ9Y215 455 aaPredicted RBP11.46□□□□□ -0.57
HMGB1P51-201ENST00000605166 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
HMGB1P51-201ENST00000605166 POTEFA5A3E0 1075 aa11.44□□□□□ -0.58
HMGB1P51-201ENST00000605166 P3H3Q8IVL6 736 aa11.44□□□□□ -0.58
HMGB1P51-201ENST00000605166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.43□□□□□ -0.58
HMGB1P51-201ENST00000605166 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
HMGB1P51-201ENST00000605166 L3MBTL3Q96JM7 780 aaPredicted RBP11.38□□□□□ -0.59
HMGB1P51-201ENST00000605166 SOX12O15370 315 aa11.36□□□□□ -0.59
HMGB1P51-201ENST00000605166 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
HMGB1P51-201ENST00000605166 G3V3G9 751 aa11.34□□□□□ -0.59
HMGB1P51-201ENST00000605166 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
HMGB1P51-201ENST00000605166 PDCD7Q8N8D1 485 aaKnown RBP11.33□□□□□ -0.6
HMGB1P51-201ENST00000605166 WDR70Q9NW82 654 aa11.33□□□□□ -0.6
HMGB1P51-201ENST00000605166 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
HMGB1P51-201ENST00000605166 CADPS2Q86UW7 1296 aa11.29□□□□□ -0.6
HMGB1P51-201ENST00000605166 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
HMGB1P51-201ENST00000605166 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms