RNA–Protein interactions for RNA: ENST00000603552.1

FOCAD-205, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-205ENST00000603552 MIER1Q8N108 512 aa12.16□□□□□ -0.46
FOCAD-205ENST00000603552 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
FOCAD-205ENST00000603552 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
FOCAD-205ENST00000603552 PLSCR2Q9NRY7 297 aa12.11□□□□□ -0.47
FOCAD-205ENST00000603552 PLCD3Q8N3E9 789 aa12.09□□□□□ -0.47
FOCAD-205ENST00000603552 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
FOCAD-205ENST00000603552 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
FOCAD-205ENST00000603552 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
FOCAD-205ENST00000603552 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
FOCAD-205ENST00000603552 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
FOCAD-205ENST00000603552 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
FOCAD-205ENST00000603552 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
FOCAD-205ENST00000603552 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
FOCAD-205ENST00000603552 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
FOCAD-205ENST00000603552 RASEFQ8IZ41 740 aa11.97□□□□□ -0.49
FOCAD-205ENST00000603552 NUBP1P53384 320 aa11.96□□□□□ -0.49
FOCAD-205ENST00000603552 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
FOCAD-205ENST00000603552 C7P10643 843 aa11.95□□□□□ -0.5
FOCAD-205ENST00000603552 SLC39A7Q92504 469 aa11.95□□□□□ -0.5
FOCAD-205ENST00000603552 POTEMA6NI47 508 aa11.93□□□□□ -0.5
FOCAD-205ENST00000603552 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
FOCAD-205ENST00000603552 ATN1P54259 1190 aaPredicted RBP11.92□□□□□ -0.5
FOCAD-205ENST00000603552 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
FOCAD-205ENST00000603552 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
FOCAD-205ENST00000603552 POTEGQ6S5H5 508 aa11.9□□□□□ -0.5
FOCAD-205ENST00000603552 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
FOCAD-205ENST00000603552 MAP3K13O43283 966 aa11.85□□□□□ -0.51
FOCAD-205ENST00000603552 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
FOCAD-205ENST00000603552 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
FOCAD-205ENST00000603552 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
FOCAD-205ENST00000603552 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
FOCAD-205ENST00000603552 BCANQ96GW7 911 aa11.82□□□□□ -0.52
FOCAD-205ENST00000603552 MAMSTRQ6ZN01 415 aa11.81□□□□□ -0.52
FOCAD-205ENST00000603552 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
FOCAD-205ENST00000603552 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
FOCAD-205ENST00000603552 LCE2DQ5TA82 110 aaPredicted RBP11.76□□□□□ -0.53
FOCAD-205ENST00000603552 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
FOCAD-205ENST00000603552 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
FOCAD-205ENST00000603552 TIE1P35590 1138 aa11.75□□□□□ -0.53
FOCAD-205ENST00000603552 PKD2Q13563 968 aa11.75□□□□□ -0.53
FOCAD-205ENST00000603552 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
FOCAD-205ENST00000603552 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
FOCAD-205ENST00000603552 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
FOCAD-205ENST00000603552 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
FOCAD-205ENST00000603552 SPOCK2Q92563 424 aa11.71□□□□□ -0.53
FOCAD-205ENST00000603552 GSE1Q14687 1217 aa11.7□□□□□ -0.54
FOCAD-205ENST00000603552 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
FOCAD-205ENST00000603552 PRKCSHP14314 528 aaPredicted RBP11.68□□□□□ -0.54
FOCAD-205ENST00000603552 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
FOCAD-205ENST00000603552 SEC24BO95487 1268 aa11.67□□□□□ -0.54
FOCAD-205ENST00000603552 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
FOCAD-205ENST00000603552 PYGBP11216 843 aa11.65□□□□□ -0.54
FOCAD-205ENST00000603552 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
FOCAD-205ENST00000603552 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
FOCAD-205ENST00000603552 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
FOCAD-205ENST00000603552 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
FOCAD-205ENST00000603552 BBXQ8WY36 941 aaPredicted RBP11.6□□□□□ -0.55
FOCAD-205ENST00000603552 IER5LQ5T953 404 aa11.56□□□□□ -0.56
FOCAD-205ENST00000603552 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
FOCAD-205ENST00000603552 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
FOCAD-205ENST00000603552 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
FOCAD-205ENST00000603552 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
FOCAD-205ENST00000603552 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
FOCAD-205ENST00000603552 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
FOCAD-205ENST00000603552 PCDHB8Q9UN66 801 aa11.53□□□□□ -0.56
FOCAD-205ENST00000603552 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
FOCAD-205ENST00000603552 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
FOCAD-205ENST00000603552 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
FOCAD-205ENST00000603552 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
FOCAD-205ENST00000603552 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
FOCAD-205ENST00000603552 PLCG2P16885 1265 aa11.47□□□□□ -0.57
FOCAD-205ENST00000603552 ST18O60284 1047 aa11.45□□□□□ -0.58
FOCAD-205ENST00000603552 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
FOCAD-205ENST00000603552 SPRYD3Q8NCJ5 442 aa11.42□□□□□ -0.58
FOCAD-205ENST00000603552 PSEN1P49768 467 aa11.4□□□□□ -0.58
FOCAD-205ENST00000603552 RGL2O15211 777 aa11.39□□□□□ -0.59
FOCAD-205ENST00000603552 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
FOCAD-205ENST00000603552 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
FOCAD-205ENST00000603552 TSHZ2Q9NRE2 1034 aa11.36□□□□□ -0.59
FOCAD-205ENST00000603552 RNF25Q96BH1 459 aaPredicted RBP11.34□□□□□ -0.59
FOCAD-205ENST00000603552 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
FOCAD-205ENST00000603552 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
FOCAD-205ENST00000603552 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
FOCAD-205ENST00000603552 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
FOCAD-205ENST00000603552 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
FOCAD-205ENST00000603552 ILDR1Q86SU0 546 aaPredicted RBP11.27□□□□□ -0.61
FOCAD-205ENST00000603552 PDCD7Q8N8D1 485 aaKnown RBP11.26□□□□□ -0.61
FOCAD-205ENST00000603552 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
FOCAD-205ENST00000603552 VGFO15240 615 aaPredicted RBP11.25□□□□□ -0.61
FOCAD-205ENST00000603552 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
FOCAD-205ENST00000603552 SNPHO15079 494 aa11.23□□□□□ -0.61
FOCAD-205ENST00000603552 NBR1Q14596 966 aa11.22□□□□□ -0.61
FOCAD-205ENST00000603552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.21□□□□□ -0.61
FOCAD-205ENST00000603552 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.61
FOCAD-205ENST00000603552 TMEM121BQ9BXQ6 578 aaPredicted RBP11.21□□□□□ -0.61
FOCAD-205ENST00000603552 SPNS2Q8IVW8 549 aa11.2□□□□□ -0.62
FOCAD-205ENST00000603552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.623e-6■■■□□ 18.3
FOCAD-205ENST00000603552 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
FOCAD-205ENST00000603552 L3MBTL3Q96JM7 780 aaPredicted RBP11.16□□□□□ -0.62
FOCAD-205ENST00000603552 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms