RNA–Protein interactions for RNA: ENST00000603189.1

MRPS35P3-201, Transcript of mitochondrial ribosomal protein S35 pseudogene 3, humanhuman

BASIC

Gene MRPS35P3, Length 709 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P3-201ENST00000603189 GALR2O43603 387 aaPredicted RBP13.87□□□□□ -0.19
MRPS35P3-201ENST00000603189 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
MRPS35P3-201ENST00000603189 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
MRPS35P3-201ENST00000603189 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
MRPS35P3-201ENST00000603189 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
MRPS35P3-201ENST00000603189 FAM212AQ96EL1 285 aa13.76□□□□□ -0.21
MRPS35P3-201ENST00000603189 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
MRPS35P3-201ENST00000603189 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
MRPS35P3-201ENST00000603189 MAP3K13O43283 966 aa13.68□□□□□ -0.22
MRPS35P3-201ENST00000603189 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
MRPS35P3-201ENST00000603189 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
MRPS35P3-201ENST00000603189 ATMINO43313 823 aaPredicted RBP13.61□□□□□ -0.23
MRPS35P3-201ENST00000603189 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
MRPS35P3-201ENST00000603189 LHX8Q68G74 356 aa13.6□□□□□ -0.23
MRPS35P3-201ENST00000603189 TIE1P35590 1138 aa13.59□□□□□ -0.23
MRPS35P3-201ENST00000603189 GSE1Q14687 1217 aa13.59□□□□□ -0.23
MRPS35P3-201ENST00000603189 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
MRPS35P3-201ENST00000603189 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
MRPS35P3-201ENST00000603189 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
MRPS35P3-201ENST00000603189 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
MRPS35P3-201ENST00000603189 TRPC6Q9Y210 931 aa13.56□□□□□ -0.24
MRPS35P3-201ENST00000603189 IFNL1Q8IU54 200 aa13.53□□□□□ -0.24
MRPS35P3-201ENST00000603189 ATN1P54259 1190 aaPredicted RBP13.52□□□□□ -0.25
MRPS35P3-201ENST00000603189 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
MRPS35P3-201ENST00000603189 PYGBP11216 843 aa13.51□□□□□ -0.25
MRPS35P3-201ENST00000603189 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
MRPS35P3-201ENST00000603189 C7P10643 843 aa13.49□□□□□ -0.25
MRPS35P3-201ENST00000603189 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
MRPS35P3-201ENST00000603189 METRNQ9UJH8 293 aa13.47□□□□□ -0.25
MRPS35P3-201ENST00000603189 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
MRPS35P3-201ENST00000603189 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
MRPS35P3-201ENST00000603189 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
MRPS35P3-201ENST00000603189 IER5LQ5T953 404 aa13.38□□□□□ -0.27
MRPS35P3-201ENST00000603189 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
MRPS35P3-201ENST00000603189 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
MRPS35P3-201ENST00000603189 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
MRPS35P3-201ENST00000603189 TRIM41Q8WV44 630 aa13.36□□□□□ -0.27
MRPS35P3-201ENST00000603189 POTEFA5A3E0 1075 aa13.33□□□□□ -0.28
MRPS35P3-201ENST00000603189 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
MRPS35P3-201ENST00000603189 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
MRPS35P3-201ENST00000603189 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
MRPS35P3-201ENST00000603189 PSEN1P49768 467 aa13.24□□□□□ -0.29
MRPS35P3-201ENST00000603189 PDAP1Q13442 181 aaKnown RBP13.24□□□□□ -0.29
MRPS35P3-201ENST00000603189 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
MRPS35P3-201ENST00000603189 SEC24BO95487 1268 aa13.23□□□□□ -0.29
MRPS35P3-201ENST00000603189 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
MRPS35P3-201ENST00000603189 PLCG2P16885 1265 aa13.17□□□□□ -0.3
MRPS35P3-201ENST00000603189 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
MRPS35P3-201ENST00000603189 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
MRPS35P3-201ENST00000603189 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
MRPS35P3-201ENST00000603189 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
MRPS35P3-201ENST00000603189 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
MRPS35P3-201ENST00000603189 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
MRPS35P3-201ENST00000603189 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
MRPS35P3-201ENST00000603189 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
MRPS35P3-201ENST00000603189 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
MRPS35P3-201ENST00000603189 CABP2Q9NPB3 220 aa13.05□□□□□ -0.32
MRPS35P3-201ENST00000603189 PKD2Q13563 968 aa13.03□□□□□ -0.32
MRPS35P3-201ENST00000603189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.02□□□□□ -0.33
MRPS35P3-201ENST00000603189 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
MRPS35P3-201ENST00000603189 ECM2O94769 699 aaPredicted RBP12.99□□□□□ -0.33
MRPS35P3-201ENST00000603189 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
MRPS35P3-201ENST00000603189 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
MRPS35P3-201ENST00000603189 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
MRPS35P3-201ENST00000603189 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
MRPS35P3-201ENST00000603189 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
MRPS35P3-201ENST00000603189 RGL2O15211 777 aa12.9□□□□□ -0.34
MRPS35P3-201ENST00000603189 SOX12O15370 315 aa12.89□□□□□ -0.35
MRPS35P3-201ENST00000603189 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.89□□□□□ -0.35
MRPS35P3-201ENST00000603189 DPY19L2Q6NUT2 758 aa12.87□□□□□ -0.35
MRPS35P3-201ENST00000603189 LCE2DQ5TA82 110 aaPredicted RBP12.86□□□□□ -0.35
MRPS35P3-201ENST00000603189 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
MRPS35P3-201ENST00000603189 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
MRPS35P3-201ENST00000603189 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
MRPS35P3-201ENST00000603189 TMEM121BQ9BXQ6 578 aaPredicted RBP12.82□□□□□ -0.36
MRPS35P3-201ENST00000603189 STK25O00506 426 aa12.81□□□□□ -0.36
MRPS35P3-201ENST00000603189 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
MRPS35P3-201ENST00000603189 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
MRPS35P3-201ENST00000603189 POTEMA6NI47 508 aa12.78□□□□□ -0.36
MRPS35P3-201ENST00000603189 G3V3G9 751 aa12.78□□□□□ -0.36
MRPS35P3-201ENST00000603189 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
MRPS35P3-201ENST00000603189 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
MRPS35P3-201ENST00000603189 NLRP6P59044 892 aa12.76□□□□□ -0.37
MRPS35P3-201ENST00000603189 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
MRPS35P3-201ENST00000603189 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
MRPS35P3-201ENST00000603189 SNPHO15079 494 aa12.74□□□□□ -0.37
MRPS35P3-201ENST00000603189 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
MRPS35P3-201ENST00000603189 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
MRPS35P3-201ENST00000603189 ST18O60284 1047 aa12.69□□□□□ -0.38
MRPS35P3-201ENST00000603189 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
MRPS35P3-201ENST00000603189 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
MRPS35P3-201ENST00000603189 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
MRPS35P3-201ENST00000603189 TMEM92Q6UXU6 159 aa12.61□□□□□ -0.39
MRPS35P3-201ENST00000603189 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
MRPS35P3-201ENST00000603189 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
MRPS35P3-201ENST00000603189 DOK7Q18PE1 504 aa12.52□□□□□ -0.41
MRPS35P3-201ENST00000603189 KIF3CO14782 793 aa12.49□□□□□ -0.41
MRPS35P3-201ENST00000603189 PPP1R37O75864 691 aa12.48□□□□□ -0.41
MRPS35P3-201ENST00000603189 NKX1-1Q15270 411 aaPredicted RBP12.47□□□□□ -0.41
MRPS35P3-201ENST00000603189 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms