RNA–Protein interactions for RNA: ENST00000599814.5

SYMPK-214, Transcript of symplekin, humanhuman

TSL 2 BASIC

Gene SYMPK, Length 6,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-214ENST00000599814 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
SYMPK-214ENST00000599814 KDM2AQ9Y2K7 1162 aa17.46■□□□□ 0.39
SYMPK-214ENST00000599814 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
SYMPK-214ENST00000599814 CDK11BP21127 795 aaKnown RBP17.44■□□□□ 0.38
SYMPK-214ENST00000599814 NBR1Q14596 966 aa17.41■□□□□ 0.38
SYMPK-214ENST00000599814 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
SYMPK-214ENST00000599814 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
SYMPK-214ENST00000599814 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
SYMPK-214ENST00000599814 HDGFP51858 240 aaKnown RBP17.34■□□□□ 0.37
SYMPK-214ENST00000599814 POGKQ9P215 609 aa17.32■□□□□ 0.36
SYMPK-214ENST00000599814 PPM1GO15355 546 aaPredicted RBP17.31■□□□□ 0.36
SYMPK-214ENST00000599814 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
SYMPK-214ENST00000599814 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
SYMPK-214ENST00000599814 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
SYMPK-214ENST00000599814 KLHL34Q8N239 644 aa17.27■□□□□ 0.35
SYMPK-214ENST00000599814 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
SYMPK-214ENST00000599814 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
SYMPK-214ENST00000599814 SOX12O15370 315 aa17.25■□□□□ 0.35
SYMPK-214ENST00000599814 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.353e-6■■■■□ 24.6
SYMPK-214ENST00000599814 RGL3Q3MIN7 710 aa17.24■□□□□ 0.35
SYMPK-214ENST00000599814 GGT6Q6P531 493 aa17.24■□□□□ 0.35
SYMPK-214ENST00000599814 TNNT2P45379 298 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-214ENST00000599814 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
SYMPK-214ENST00000599814 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
SYMPK-214ENST00000599814 CSB-PGBD3P0DP91 1061 aa17.21■□□□□ 0.35
SYMPK-214ENST00000599814 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
SYMPK-214ENST00000599814 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
SYMPK-214ENST00000599814 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
SYMPK-214ENST00000599814 CECR2Q9BXF3 1484 aa17.2■□□□□ 0.34
SYMPK-214ENST00000599814 MSH5O43196 834 aa17.2■□□□□ 0.34
SYMPK-214ENST00000599814 TRIM44Q96DX7 344 aaPredicted RBP17.2■□□□□ 0.34
SYMPK-214ENST00000599814 TONSLQ96HA7 1378 aa17.2■□□□□ 0.34
SYMPK-214ENST00000599814 CFDP1Q9UEE9 299 aaPredicted RBP17.19■□□□□ 0.34
SYMPK-214ENST00000599814 DDRGK1Q96HY6 314 aa17.19■□□□□ 0.34
SYMPK-214ENST00000599814 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
SYMPK-214ENST00000599814 EIF4G1Q04637 1599 aaKnown RBP17.17■□□□□ 0.34
SYMPK-214ENST00000599814 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
SYMPK-214ENST00000599814 NCLP19338 710 aaKnown RBP17.14■□□□□ 0.33
SYMPK-214ENST00000599814 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.14■□□□□ 0.33
SYMPK-214ENST00000599814 BECN1Q14457 450 aa17.13■□□□□ 0.33
SYMPK-214ENST00000599814 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
SYMPK-214ENST00000599814 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
SYMPK-214ENST00000599814 EID1Q9Y6B2 187 aa17.11■□□□□ 0.33
SYMPK-214ENST00000599814 FOXD1Q16676 465 aa17.11■□□□□ 0.33
SYMPK-214ENST00000599814 GOLGA2Q08379 1002 aa17.11■□□□□ 0.33
SYMPK-214ENST00000599814 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
SYMPK-214ENST00000599814 GOLGA6L22H0YM25 854 aa17.07■□□□□ 0.32
SYMPK-214ENST00000599814 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
SYMPK-214ENST00000599814 KANK1Q14678 1352 aa17.06■□□□□ 0.32
SYMPK-214ENST00000599814 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
SYMPK-214ENST00000599814 SAFB2Q14151 953 aaKnown RBP eCLIP17.04■□□□□ 0.32
SYMPK-214ENST00000599814 G3V3G9 751 aa17.04■□□□□ 0.32
SYMPK-214ENST00000599814 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
SYMPK-214ENST00000599814 ISY1Q9ULR0 285 aaKnown RBP17.03■□□□□ 0.32
SYMPK-214ENST00000599814 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.31
SYMPK-214ENST00000599814 SF3B2Q13435 895 aaKnown RBP17.02■□□□□ 0.31
SYMPK-214ENST00000599814 STK26Q9P289 416 aa17.01■□□□□ 0.31
SYMPK-214ENST00000599814 CLSTN1O94985 981 aa17.01■□□□□ 0.31
SYMPK-214ENST00000599814 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
SYMPK-214ENST00000599814 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
SYMPK-214ENST00000599814 EIF4G2P78344 907 aaKnown RBP eCLIP16.99■□□□□ 0.312e-7■■■■■ 34.2
SYMPK-214ENST00000599814 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
SYMPK-214ENST00000599814 NACADO15069 1562 aa16.99■□□□□ 0.31
SYMPK-214ENST00000599814 DNTTIP2Q5QJE6 756 aaKnown RBP16.98■□□□□ 0.31
SYMPK-214ENST00000599814 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
SYMPK-214ENST00000599814 IRX6P78412 446 aaPredicted RBP16.96■□□□□ 0.31
SYMPK-214ENST00000599814 EVA1CP58658 441 aa16.96■□□□□ 0.31
SYMPK-214ENST00000599814 NAP1L5Q96NT1 182 aaPredicted RBP16.96■□□□□ 0.31
SYMPK-214ENST00000599814 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.31
SYMPK-214ENST00000599814 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
SYMPK-214ENST00000599814 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
SYMPK-214ENST00000599814 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
SYMPK-214ENST00000599814 PIP4K2BP78356 416 aa16.92■□□□□ 0.3
SYMPK-214ENST00000599814 CARMIL2Q6F5E8 1435 aa16.92■□□□□ 0.3
SYMPK-214ENST00000599814 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
SYMPK-214ENST00000599814 PPP1R1BQ9UD71 204 aaPredicted RBP16.9■□□□□ 0.3
SYMPK-214ENST00000599814 CFAP53Q96M91 514 aa16.89■□□□□ 0.29
SYMPK-214ENST00000599814 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
SYMPK-214ENST00000599814 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
SYMPK-214ENST00000599814 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
SYMPK-214ENST00000599814 CLIP1P30622 1438 aa16.85■□□□□ 0.29
SYMPK-214ENST00000599814 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
SYMPK-214ENST00000599814 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
SYMPK-214ENST00000599814 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
SYMPK-214ENST00000599814 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
SYMPK-214ENST00000599814 NUTM2DQ5VT03 806 aaPredicted RBP16.82■□□□□ 0.28
SYMPK-214ENST00000599814 MIER1Q8N108 512 aa16.82■□□□□ 0.28
SYMPK-214ENST00000599814 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
SYMPK-214ENST00000599814 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
SYMPK-214ENST00000599814 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
SYMPK-214ENST00000599814 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
SYMPK-214ENST00000599814 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
SYMPK-214ENST00000599814 RTN4Q9NQC3 1192 aaKnown RBP16.79■□□□□ 0.28
SYMPK-214ENST00000599814 SMARCA2P51531 1590 aa16.78■□□□□ 0.28
SYMPK-214ENST00000599814 HIRIP3Q9BW71 556 aaPredicted RBP16.78■□□□□ 0.28
SYMPK-214ENST00000599814 ZCCHC6Q5VYS8 1495 aaKnown RBP16.78■□□□□ 0.28
SYMPK-214ENST00000599814 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
SYMPK-214ENST00000599814 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
SYMPK-214ENST00000599814 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
SYMPK-214ENST00000599814 FTSJ3Q8IY81 847 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms