RNA–Protein interactions for RNA: ENST00000597823.1

LRMDA-213, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 4

Gene LRMDA, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-213ENST00000597823 FAM212AQ96EL1 285 aa15.86■□□□□ 0.13
LRMDA-213ENST00000597823 PHF12Q96QT6 1004 aa15.83■□□□□ 0.12
LRMDA-213ENST00000597823 DCAF8Q5TAQ9 597 aa15.81■□□□□ 0.12
LRMDA-213ENST00000597823 SPOCK2Q92563 424 aa15.81■□□□□ 0.12
LRMDA-213ENST00000597823 CCDC61Q9Y6R9 512 aa15.8■□□□□ 0.12
LRMDA-213ENST00000597823 GSE1Q14687 1217 aa15.72■□□□□ 0.11
LRMDA-213ENST00000597823 GALR2O43603 387 aaPredicted RBP15.68■□□□□ 0.1
LRMDA-213ENST00000597823 KIF12Q96FN5 646 aa15.67■□□□□ 0.1
LRMDA-213ENST00000597823 DCBLD2Q96PD2 775 aa15.65■□□□□ 0.1
LRMDA-213ENST00000597823 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
LRMDA-213ENST00000597823 MS4A3Q96HJ5 214 aa15.63■□□□□ 0.09
LRMDA-213ENST00000597823 MAP3K13O43283 966 aa15.62■□□□□ 0.09
LRMDA-213ENST00000597823 PYGBP11216 843 aa15.6■□□□□ 0.09
LRMDA-213ENST00000597823 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
LRMDA-213ENST00000597823 PCDHB13Q9Y5F0 798 aa15.58■□□□□ 0.08
LRMDA-213ENST00000597823 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
LRMDA-213ENST00000597823 CHRM1P11229 460 aaPredicted RBP15.47■□□□□ 0.07
LRMDA-213ENST00000597823 IFNL1Q8IU54 200 aa15.47■□□□□ 0.07
LRMDA-213ENST00000597823 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
LRMDA-213ENST00000597823 TIE1P35590 1138 aa15.42■□□□□ 0.06
LRMDA-213ENST00000597823 ZNF467Q7Z7K2 595 aaPredicted RBP15.42■□□□□ 0.06
LRMDA-213ENST00000597823 TRPC6Q9Y210 931 aa15.41■□□□□ 0.06
LRMDA-213ENST00000597823 ASTLQ6HA08 431 aaPredicted RBP15.4■□□□□ 0.06
LRMDA-213ENST00000597823 PCDHB8Q9UN66 801 aa15.4■□□□□ 0.06
LRMDA-213ENST00000597823 ATMINO43313 823 aaPredicted RBP15.39■□□□□ 0.05
LRMDA-213ENST00000597823 BMP2KQ9NSY1 1161 aaPredicted RBP15.37■□□□□ 0.05
LRMDA-213ENST00000597823 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
LRMDA-213ENST00000597823 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
LRMDA-213ENST00000597823 TMEM106CQ9BVX2 250 aa15.32■□□□□ 0.04
LRMDA-213ENST00000597823 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
LRMDA-213ENST00000597823 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
LRMDA-213ENST00000597823 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
LRMDA-213ENST00000597823 C7P10643 843 aa15.25■□□□□ 0.03
LRMDA-213ENST00000597823 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
LRMDA-213ENST00000597823 PSEN1P49768 467 aa15.24■□□□□ 0.03
LRMDA-213ENST00000597823 PDAP1Q13442 181 aaKnown RBP15.24■□□□□ 0.03
LRMDA-213ENST00000597823 METRNQ9UJH8 293 aa15.22■□□□□ 0.03
LRMDA-213ENST00000597823 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
LRMDA-213ENST00000597823 PKD2Q13563 968 aa15.2■□□□□ 0.02
LRMDA-213ENST00000597823 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
LRMDA-213ENST00000597823 LHX8Q68G74 356 aa15.18■□□□□ 0.02
LRMDA-213ENST00000597823 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
LRMDA-213ENST00000597823 SEC24BO95487 1268 aa15.15■□□□□ 0.02
LRMDA-213ENST00000597823 IER5LQ5T953 404 aa15.15■□□□□ 0.02
LRMDA-213ENST00000597823 RNF25Q96BH1 459 aaPredicted RBP15.13■□□□□ 0.01
LRMDA-213ENST00000597823 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
LRMDA-213ENST00000597823 MKRN3Q13064 507 aaKnown RBP15.09■□□□□ 0.01
LRMDA-213ENST00000597823 CABP2Q9NPB3 220 aa15.06■□□□□ 0
LRMDA-213ENST00000597823 RGL2O15211 777 aa15.05■□□□□ -0
LRMDA-213ENST00000597823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.04■□□□□ -0
LRMDA-213ENST00000597823 PLCG2P16885 1265 aa15.04■□□□□ -0
LRMDA-213ENST00000597823 ZFP91Q96JP5 570 aaPredicted RBP15.04■□□□□ -0
LRMDA-213ENST00000597823 COLQQ9Y215 455 aaPredicted RBP15.02■□□□□ -0
LRMDA-213ENST00000597823 OCEL1Q9H607 264 aa15□□□□□ -0.01
LRMDA-213ENST00000597823 POTEFA5A3E0 1075 aa14.99□□□□□ -0.01
LRMDA-213ENST00000597823 POTEB2H3BUK9 544 aa14.99□□□□□ -0.01
LRMDA-213ENST00000597823 IRX5P78411 483 aaPredicted RBP14.98□□□□□ -0.01
LRMDA-213ENST00000597823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.96□□□□□ -0.01
LRMDA-213ENST00000597823 STK25O00506 426 aa14.94□□□□□ -0.02
LRMDA-213ENST00000597823 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
LRMDA-213ENST00000597823 STK24Q9Y6E0 443 aa14.94□□□□□ -0.02
LRMDA-213ENST00000597823 MAMSTRQ6ZN01 415 aa14.93□□□□□ -0.02
LRMDA-213ENST00000597823 EFCAB3Q8N7B9 438 aa14.92□□□□□ -0.02
LRMDA-213ENST00000597823 SCUBE2Q9NQ36 999 aa14.88□□□□□ -0.03
LRMDA-213ENST00000597823 AMER1Q5JTC6 1135 aaPredicted RBP14.86□□□□□ -0.03
LRMDA-213ENST00000597823 SOX12O15370 315 aa14.85□□□□□ -0.03
LRMDA-213ENST00000597823 POTEJP0CG39 1038 aa14.85□□□□□ -0.03
LRMDA-213ENST00000597823 OTUD5Q96G74 571 aa14.85□□□□□ -0.03
LRMDA-213ENST00000597823 PDCD7Q8N8D1 485 aaKnown RBP14.84□□□□□ -0.03
LRMDA-213ENST00000597823 L3MBTL3Q96JM7 780 aaPredicted RBP14.82□□□□□ -0.04
LRMDA-213ENST00000597823 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
LRMDA-213ENST00000597823 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
LRMDA-213ENST00000597823 G3V3G9 751 aa14.79□□□□□ -0.04
LRMDA-213ENST00000597823 CHGAP10645 457 aaKnown RBP14.78□□□□□ -0.04
LRMDA-213ENST00000597823 PHF8Q9UPP1 1060 aa14.76□□□□□ -0.05
LRMDA-213ENST00000597823 NLRP6P59044 892 aa14.75□□□□□ -0.05
LRMDA-213ENST00000597823 DPY19L2Q6NUT2 758 aa14.75□□□□□ -0.05
LRMDA-213ENST00000597823 HS6ST3Q8IZP7 471 aa14.75□□□□□ -0.05
LRMDA-213ENST00000597823 RTN4Q9NQC3 1192 aaKnown RBP14.72□□□□□ -0.05
LRMDA-213ENST00000597823 C3orf67Q6ZVT6 689 aa14.71□□□□□ -0.05
LRMDA-213ENST00000597823 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.71□□□□□ -0.05
LRMDA-213ENST00000597823 BOLA1Q9Y3E2 137 aa14.7□□□□□ -0.06
LRMDA-213ENST00000597823 MFRPQ9BY79 579 aa14.67□□□□□ -0.06
LRMDA-213ENST00000597823 SLAIN1Q8ND83 568 aa14.66□□□□□ -0.06
LRMDA-213ENST00000597823 MS4A4AQ96JQ5 239 aa14.65□□□□□ -0.06
LRMDA-213ENST00000597823 FBXO22Q8NEZ5 403 aa14.64□□□□□ -0.07
LRMDA-213ENST00000597823 MICALL2Q8IY33 904 aa14.56□□□□□ -0.08
LRMDA-213ENST00000597823 TMEM121BQ9BXQ6 578 aaPredicted RBP14.56□□□□□ -0.08
LRMDA-213ENST00000597823 DNAJC5Q9H3Z4 198 aa14.56□□□□□ -0.08
LRMDA-213ENST00000597823 RYDENQ9NUL5 291 aaKnown RBP14.55□□□□□ -0.08
LRMDA-213ENST00000597823 NKX1-1Q15270 411 aaPredicted RBP14.49□□□□□ -0.09
LRMDA-213ENST00000597823 SNPHO15079 494 aa14.47□□□□□ -0.09
LRMDA-213ENST00000597823 FAM163AQ96GL9 167 aaPredicted RBP14.47□□□□□ -0.09
LRMDA-213ENST00000597823 PPP1R37O75864 691 aa14.44□□□□□ -0.1
LRMDA-213ENST00000597823 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
LRMDA-213ENST00000597823 GTPBP6O43824 516 aaPredicted RBP14.36□□□□□ -0.11
LRMDA-213ENST00000597823 TMEM92Q6UXU6 159 aa14.35□□□□□ -0.11
LRMDA-213ENST00000597823 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.33□□□□□ -0.12
LRMDA-213ENST00000597823 TMC2Q8TDI7 906 aa14.32□□□□□ -0.12
LRMDA-213ENST00000597823 ST18O60284 1047 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms