RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
LINC00347-202ENST00000594461 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
LINC00347-202ENST00000594461 CDK11AQ9UQ88 783 aaPredicted RBP10.23□□□□□ -0.77
LINC00347-202ENST00000594461 CACNB1Q02641 598 aaPredicted RBP10.23□□□□□ -0.77
LINC00347-202ENST00000594461 BCCIPQ9P287 314 aaKnown RBP eCLIP10.23□□□□□ -0.77
LINC00347-202ENST00000594461 RTL5Q5HYW3 569 aaPredicted RBP10.22□□□□□ -0.77
LINC00347-202ENST00000594461 IPO4Q8TEX9 1081 aaKnown RBP10.22□□□□□ -0.77
LINC00347-202ENST00000594461 NBR1Q14596 966 aa10.22□□□□□ -0.77
LINC00347-202ENST00000594461 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.78
LINC00347-202ENST00000594461 CHMP4BQ9H444 224 aaKnown RBP10.21□□□□□ -0.78
LINC00347-202ENST00000594461 RRP9O43818 475 aaKnown RBP10.2□□□□□ -0.78
LINC00347-202ENST00000594461 CDK11BP21127 795 aaKnown RBP10.19□□□□□ -0.78
LINC00347-202ENST00000594461 SCRIBQ14160 1630 aa10.19□□□□□ -0.78
LINC00347-202ENST00000594461 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
LINC00347-202ENST00000594461 FOXD1Q16676 465 aa10.18□□□□□ -0.78
LINC00347-202ENST00000594461 HSP90AA2PQ14568 343 aaPredicted RBP10.17□□□□□ -0.78
LINC00347-202ENST00000594461 BCANQ96GW7 911 aa10.16□□□□□ -0.78
LINC00347-202ENST00000594461 ZFP91Q96JP5 570 aaPredicted RBP10.16□□□□□ -0.78
LINC00347-202ENST00000594461 NACADO15069 1562 aa10.15□□□□□ -0.78
LINC00347-202ENST00000594461 GTF2E1P29083 439 aaPredicted RBP10.15□□□□□ -0.79
LINC00347-202ENST00000594461 RB1CC1Q8TDY2 1594 aa10.14□□□□□ -0.79
LINC00347-202ENST00000594461 TPRNQ4KMQ1 711 aa10.14□□□□□ -0.79
LINC00347-202ENST00000594461 NOP58Q9Y2X3 529 aaKnown RBP10.14□□□□□ -0.79
LINC00347-202ENST00000594461 IRX6P78412 446 aaPredicted RBP10.13□□□□□ -0.79
LINC00347-202ENST00000594461 WASHC2CQ9Y4E1 1318 aa10.13□□□□□ -0.79
LINC00347-202ENST00000594461 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
LINC00347-202ENST00000594461 CANXP27824 592 aaKnown RBP10.11□□□□□ -0.79
LINC00347-202ENST00000594461 PRDM4Q9UKN5 801 aa10.11□□□□□ -0.79
LINC00347-202ENST00000594461 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
LINC00347-202ENST00000594461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00347-202ENST00000594461 FTSJ3Q8IY81 847 aaKnown RBP10.1□□□□□ -0.79
LINC00347-202ENST00000594461 FKBP8Q14318 412 aa10.09□□□□□ -0.79
LINC00347-202ENST00000594461 PABPN1Q86U42 306 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC00347-202ENST00000594461 WASHC2AQ641Q2 1341 aa10.09□□□□□ -0.79
LINC00347-202ENST00000594461 CALD1Q05682 793 aaKnown RBP10.09□□□□□ -0.79
LINC00347-202ENST00000594461 FAM43AQ8N2R8 423 aa10.09□□□□□ -0.79
LINC00347-202ENST00000594461 STAC3Q96MF2 364 aa10.09□□□□□ -0.79
LINC00347-202ENST00000594461 SECISBP2LQ93073 1101 aaKnown RBP10.08□□□□□ -0.8
LINC00347-202ENST00000594461 CNGB1Q14028 1251 aaPredicted RBP10.07□□□□□ -0.8
LINC00347-202ENST00000594461 BRPF3Q9ULD4 1205 aa10.07□□□□□ -0.8
LINC00347-202ENST00000594461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.06□□□□□ -0.8
LINC00347-202ENST00000594461 HSP90AA1P07900 732 aaKnown RBP10.03□□□□□ -0.8
LINC00347-202ENST00000594461 RGS3P49796 1198 aa10.02□□□□□ -0.8
LINC00347-202ENST00000594461 KCNA4P22459 653 aa10.01□□□□□ -0.81
LINC00347-202ENST00000594461 ITGAEP38570 1179 aa10.01□□□□□ -0.81
LINC00347-202ENST00000594461 USP35Q9P2H5 1018 aa10.01□□□□□ -0.81
LINC00347-202ENST00000594461 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
LINC00347-202ENST00000594461 CENPJQ9HC77 1338 aaPredicted RBP10□□□□□ -0.81
LINC00347-202ENST00000594461 UNC13AQ9UPW8 1703 aa9.99□□□□□ -0.81
LINC00347-202ENST00000594461 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
LINC00347-202ENST00000594461 RNF216Q9NWF9 866 aaPredicted RBP9.99□□□□□ -0.81
LINC00347-202ENST00000594461 NEFMP07197 916 aa9.99□□□□□ -0.81
LINC00347-202ENST00000594461 CNPY4Q8N129 248 aa9.99□□□□□ -0.81
LINC00347-202ENST00000594461 POLR3GLQ9BT43 218 aa9.98□□□□□ -0.81
LINC00347-202ENST00000594461 PPM1GO15355 546 aaPredicted RBP9.97□□□□□ -0.81
LINC00347-202ENST00000594461 ARID4BQ4LE39 1312 aaPredicted RBP9.97□□□□□ -0.81
LINC00347-202ENST00000594461 CCDC9Q9Y3X0 531 aaKnown RBP9.92□□□□□ -0.82
LINC00347-202ENST00000594461 KCNG1Q9UIX4 513 aa9.91□□□□□ -0.82
LINC00347-202ENST00000594461 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
LINC00347-202ENST00000594461 PLCD3Q8N3E9 789 aa9.9□□□□□ -0.82
LINC00347-202ENST00000594461 ZNF830Q96NB3 372 aaPredicted RBP9.9□□□□□ -0.82
LINC00347-202ENST00000594461 SUPT5HO00267 1087 aaKnown RBP9.89□□□□□ -0.83
LINC00347-202ENST00000594461 PDCL3Q9H2J4 239 aa9.89□□□□□ -0.83
LINC00347-202ENST00000594461 PRDM10Q9NQV6 1147 aa9.89□□□□□ -0.83
LINC00347-202ENST00000594461 BICRAQ9NZM4 1560 aa9.89□□□□□ -0.83
LINC00347-202ENST00000594461 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
LINC00347-202ENST00000594461 TICAM2Q86XR7 235 aa9.89□□□□□ -0.83
LINC00347-202ENST00000594461 GSE1Q14687 1217 aa9.88□□□□□ -0.83
LINC00347-202ENST00000594461 IPO9Q96P70 1041 aaKnown RBP9.87□□□□□ -0.83
LINC00347-202ENST00000594461 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
LINC00347-202ENST00000594461 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.87□□□□□ -0.83
LINC00347-202ENST00000594461 VGFO15240 615 aaPredicted RBP9.87□□□□□ -0.83
LINC00347-202ENST00000594461 IGSF3O75054 1194 aa9.87□□□□□ -0.83
LINC00347-202ENST00000594461 TMEM51Q9NW97 253 aa9.86□□□□□ -0.83
LINC00347-202ENST00000594461 RGS22Q8NE09 1264 aa9.85□□□□□ -0.83
LINC00347-202ENST00000594461 HMGB1P09429 215 aaKnown RBP9.83□□□□□ -0.84
LINC00347-202ENST00000594461 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
LINC00347-202ENST00000594461 ANP32AP39687 249 aaKnown RBP9.82□□□□□ -0.84
LINC00347-202ENST00000594461 GRIPAP1Q4V328 841 aa9.81□□□□□ -0.84
LINC00347-202ENST00000594461 UBTFP17480 764 aaKnown RBP9.8□□□□□ -0.84
LINC00347-202ENST00000594461 CLGNO14967 610 aa9.8□□□□□ -0.84
LINC00347-202ENST00000594461 SMAP1Q8IYB5 467 aaPredicted RBP9.8□□□□□ -0.84
LINC00347-202ENST00000594461 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
LINC00347-202ENST00000594461 PPP6R1Q9UPN7 881 aa9.8□□□□□ -0.84
LINC00347-202ENST00000594461 PTMAP06454 111 aaKnown RBP9.79□□□□□ -0.84
LINC00347-202ENST00000594461 FAM193AP78312 1265 aa9.79□□□□□ -0.84
LINC00347-202ENST00000594461 PNNQ9H307 717 aaKnown RBP9.79□□□□□ -0.84
LINC00347-202ENST00000594461 IRX3P78415 501 aaPredicted RBP9.79□□□□□ -0.84
LINC00347-202ENST00000594461 RRAGDQ9NQL2 400 aaPredicted RBP9.79□□□□□ -0.84
LINC00347-202ENST00000594461 CLSTN1O94985 981 aa9.78□□□□□ -0.84
LINC00347-202ENST00000594461 ZNF592Q92610 1267 aa9.78□□□□□ -0.84
LINC00347-202ENST00000594461 VGLL3A8MV65 326 aa9.78□□□□□ -0.84
LINC00347-202ENST00000594461 MMP14P50281 582 aa9.77□□□□□ -0.85
LINC00347-202ENST00000594461 TMED8Q6PL24 325 aaPredicted RBP9.77□□□□□ -0.85
LINC00347-202ENST00000594461 DDRGK1Q96HY6 314 aa9.75□□□□□ -0.85
LINC00347-202ENST00000594461 PATL2C9JE40 543 aaKnown RBP9.75□□□□□ -0.85
LINC00347-202ENST00000594461 PLCD4Q9BRC7 762 aa9.75□□□□□ -0.85
LINC00347-202ENST00000594461 UTP14CQ5TAP6 766 aaKnown RBP9.74□□□□□ -0.85
LINC00347-202ENST00000594461 ANP32BQ92688 251 aaKnown RBP9.74□□□□□ -0.85
LINC00347-202ENST00000594461 FAM43BQ6ZT52 329 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms