RNA–Protein interactions for RNA: ENST00000591652.1

ZNF559-209, Transcript of zinc finger protein 559, human

TSL 3

Gene ZNF559, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF559-209	ENST00000591652	CCDC61	Q9Y6R9	512 aa		12.98	□□□□□ -0.33
ZNF559-209	ENST00000591652	NUBP1	P53384	320 aa		12.92	□□□□□ -0.34
ZNF559-209	ENST00000591652	MS4A3	Q96HJ5	214 aa		12.92	□□□□□ -0.34
ZNF559-209	ENST00000591652	KIF12	Q96FN5	646 aa		12.89	□□□□□ -0.35
ZNF559-209	ENST00000591652	LHX8	Q68G74	356 aa		12.88	□□□□□ -0.35
ZNF559-209	ENST00000591652	VASP	P50552	380 aa	Predicted RBP	12.87	□□□□□ -0.35
ZNF559-209	ENST00000591652	MAP3K13	O43283	966 aa		12.82	□□□□□ -0.36
ZNF559-209	ENST00000591652	FAM212A	Q96EL1	285 aa		12.81	□□□□□ -0.36
ZNF559-209	ENST00000591652	ASTL	Q6HA08	431 aa	Predicted RBP	12.79	□□□□□ -0.36
ZNF559-209	ENST00000591652	PELP1	Q8IZL8	1130 aa	Known RBP	12.78	□□□□□ -0.36
ZNF559-209	ENST00000591652	ATMIN	O43313	823 aa	Predicted RBP	12.77	□□□□□ -0.37
ZNF559-209	ENST00000591652	KLHL34	Q8N239	644 aa		12.76	□□□□□ -0.37
ZNF559-209	ENST00000591652	TRPC6	Q9Y210	931 aa		12.74	□□□□□ -0.37
ZNF559-209	ENST00000591652	DCAF8	Q5TAQ9	597 aa		12.73	□□□□□ -0.37
ZNF559-209	ENST00000591652	SGIP1	Q9BQI5	828 aa		12.73	□□□□□ -0.37
ZNF559-209	ENST00000591652	PCDHB13	Q9Y5F0	798 aa		12.71	□□□□□ -0.37
ZNF559-209	ENST00000591652	ATN1	P54259	1190 aa	Predicted RBP	12.7	□□□□□ -0.38
ZNF559-209	ENST00000591652	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.7	□□□□□ -0.38
ZNF559-209	ENST00000591652	TIE1	P35590	1138 aa		12.68	□□□□□ -0.38
ZNF559-209	ENST00000591652	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.67	□□□□□ -0.38
ZNF559-209	ENST00000591652	SLC39A7	Q92504	469 aa		12.67	□□□□□ -0.38
ZNF559-209	ENST00000591652	IFNL1	Q8IU54	200 aa		12.66	□□□□□ -0.38
ZNF559-209	ENST00000591652	METRN	Q9UJH8	293 aa		12.66	□□□□□ -0.38
ZNF559-209	ENST00000591652	C7	P10643	843 aa		12.65	□□□□□ -0.38
ZNF559-209	ENST00000591652	POTEB2	H3BUK9	544 aa		12.64	□□□□□ -0.39
ZNF559-209	ENST00000591652	PYGB	P11216	843 aa		12.64	□□□□□ -0.39
ZNF559-209	ENST00000591652	TTLL13P	A6NNM8	815 aa		12.62	□□□□□ -0.39
ZNF559-209	ENST00000591652	GSE1	Q14687	1217 aa		12.62	□□□□□ -0.39
ZNF559-209	ENST00000591652	SPOCK2	Q92563	424 aa		12.59	□□□□□ -0.39
ZNF559-209	ENST00000591652	OTUD5	Q96G74	571 aa		12.55	□□□□□ -0.4
ZNF559-209	ENST00000591652	TRIM35	Q9UPQ4	493 aa		12.54	□□□□□ -0.4
ZNF559-209	ENST00000591652	TMEM106C	Q9BVX2	250 aa		12.53	□□□□□ -0.4
ZNF559-209	ENST00000591652	PCDHB8	Q9UN66	801 aa		12.53	□□□□□ -0.4
ZNF559-209	ENST00000591652	POTEF	A5A3E0	1075 aa		12.52	□□□□□ -0.41
ZNF559-209	ENST00000591652	CHRM1	P11229	460 aa	Predicted RBP	12.51	□□□□□ -0.41
ZNF559-209	ENST00000591652	POTEJ	P0CG39	1038 aa		12.5	□□□□□ -0.41
ZNF559-209	ENST00000591652	IER5L	Q5T953	404 aa		12.48	□□□□□ -0.41
ZNF559-209	ENST00000591652	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.48	□□□□□ -0.41
ZNF559-209	ENST00000591652	COLQ	Q9Y215	455 aa	Predicted RBP	12.47	□□□□□ -0.41
ZNF559-209	ENST00000591652	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.46	□□□□□ -0.41
ZNF559-209	ENST00000591652	SEC24B	O95487	1268 aa		12.44	□□□□□ -0.42
ZNF559-209	ENST00000591652	MAMSTR	Q6ZN01	415 aa		12.42	□□□□□ -0.42
ZNF559-209	ENST00000591652	IRX5	P78411	483 aa	Predicted RBP	12.36	□□□□□ -0.43
ZNF559-209	ENST00000591652	PSEN1	P49768	467 aa		12.35	□□□□□ -0.43
ZNF559-209	ENST00000591652	SCUBE2	Q9NQ36	999 aa		12.35	□□□□□ -0.43
ZNF559-209	ENST00000591652	PLCG2	P16885	1265 aa		12.33	□□□□□ -0.44
ZNF559-209	ENST00000591652	PDAP1	Q13442	181 aa	Known RBP	12.32	□□□□□ -0.44
ZNF559-209	ENST00000591652	TRIM41	Q8WV44	630 aa		12.32	□□□□□ -0.44
ZNF559-209	ENST00000591652	OCEL1	Q9H607	264 aa		12.31	□□□□□ -0.44
ZNF559-209	ENST00000591652	GOLGA2	Q08379	1002 aa		12.27	□□□□□ -0.45
ZNF559-209	ENST00000591652	MKRN3	Q13064	507 aa	Known RBP	12.25	□□□□□ -0.45
ZNF559-209	ENST00000591652	PDCD7	Q8N8D1	485 aa	Known RBP	12.22	□□□□□ -0.45
ZNF559-209	ENST00000591652	CABP2	Q9NPB3	220 aa		12.2	□□□□□ -0.46
ZNF559-209	ENST00000591652	RNF25	Q96BH1	459 aa	Predicted RBP	12.18	□□□□□ -0.46
ZNF559-209	ENST00000591652	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
ZNF559-209	ENST00000591652	RIOK3	O14730	519 aa	Known RBP	12.16	□□□□□ -0.46
ZNF559-209	ENST00000591652	ILDR1	Q86SU0	546 aa	Predicted RBP	12.16	□□□□□ -0.46
ZNF559-209	ENST00000591652	SLAIN1	Q8ND83	568 aa		12.15	□□□□□ -0.46
ZNF559-209	ENST00000591652	LCE2D	Q5TA82	110 aa	Predicted RBP	12.12	□□□□□ -0.47
ZNF559-209	ENST00000591652	FAM163A	Q96GL9	167 aa	Predicted RBP	12.12	□□□□□ -0.47
ZNF559-209	ENST00000591652	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.11	□□□□□ -0.47
ZNF559-209	ENST00000591652	POTEM	A6NI47	508 aa		12.1	□□□□□ -0.47
ZNF559-209	ENST00000591652	VGF	O15240	615 aa	Predicted RBP	12.1	□□□□□ -0.47
ZNF559-209	ENST00000591652	POTEG	Q6S5H5	508 aa		12.09	□□□□□ -0.47
ZNF559-209	ENST00000591652	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.09	□□□□□ -0.47
ZNF559-209	ENST00000591652	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.08	□□□□□ -0.48
ZNF559-209	ENST00000591652	DPY19L2	Q6NUT2	758 aa		12.08	□□□□□ -0.48
ZNF559-209	ENST00000591652	EFCAB3	Q8N7B9	438 aa		12.08	□□□□□ -0.48
ZNF559-209	ENST00000591652	ZFP91	Q96JP5	570 aa	Predicted RBP	12.08	□□□□□ -0.48
ZNF559-209	ENST00000591652	ECM2	O94769	699 aa	Predicted RBP	12.04	□□□□□ -0.48
ZNF559-209	ENST00000591652	PKD2	Q13563	968 aa		12.04	□□□□□ -0.48
ZNF559-209	ENST00000591652	C3orf67	Q6ZVT6	689 aa		12.04	□□□□□ -0.48
ZNF559-209	ENST00000591652	TAOK2	Q9UL54	1235 aa		12	□□□□□ -0.49
ZNF559-209	ENST00000591652	BOLA1	Q9Y3E2	137 aa		11.99	□□□□□ -0.49
ZNF559-209	ENST00000591652	SOX12	O15370	315 aa		11.98	□□□□□ -0.49
ZNF559-209	ENST00000591652		G3V3G9	751 aa		11.96	□□□□□ -0.49
ZNF559-209	ENST00000591652	RGL2	O15211	777 aa		11.96	□□□□□ -0.49
ZNF559-209	ENST00000591652	ST18	O60284	1047 aa		11.96	□□□□□ -0.49
ZNF559-209	ENST00000591652	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.96	□□□□□ -0.49
ZNF559-209	ENST00000591652	SNPH	O15079	494 aa		11.94	□□□□□ -0.5
ZNF559-209	ENST00000591652	MS4A4A	Q96JQ5	239 aa		11.93	□□□□□ -0.5
ZNF559-209	ENST00000591652	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.93	□□□□□ -0.5
ZNF559-209	ENST00000591652	PHF8	Q9UPP1	1060 aa		11.93	□□□□□ -0.5
ZNF559-209	ENST00000591652	STK24	Q9Y6E0	443 aa		11.92	□□□□□ -0.5
ZNF559-209	ENST00000591652	STK25	O00506	426 aa		11.91	□□□□□ -0.5
ZNF559-209	ENST00000591652	PCDH10	Q9P2E7	1040 aa		11.9	□□□□□ -0.5
ZNF559-209	ENST00000591652	MICALL2	Q8IY33	904 aa		11.87	□□□□□ -0.51
ZNF559-209	ENST00000591652	NLRP6	P59044	892 aa		11.86	□□□□□ -0.51
ZNF559-209	ENST00000591652	FBXO22	Q8NEZ5	403 aa		11.85	□□□□□ -0.51
ZNF559-209	ENST00000591652	PLSCR2	Q9NRY7	297 aa		11.84	□□□□□ -0.51
ZNF559-209	ENST00000591652	MFRP	Q9BY79	579 aa		11.83	□□□□□ -0.52
ZNF559-209	ENST00000591652	TMEM92	Q6UXU6	159 aa		11.79	□□□□□ -0.52
ZNF559-209	ENST00000591652	CDAN1	Q8IWY9	1227 aa		11.78	□□□□□ -0.52
ZNF559-209	ENST00000591652	MARVELD3	Q96A59	401 aa		11.78	□□□□□ -0.52
ZNF559-209	ENST00000591652	HOXB3	P14651	431 aa	Predicted RBP	11.77	□□□□□ -0.53
ZNF559-209	ENST00000591652	EMP3	P54852	163 aa		11.71	□□□□□ -0.53
ZNF559-209	ENST00000591652	DOK7	Q18PE1	504 aa		11.7	□□□□□ -0.54
ZNF559-209	ENST00000591652	HS6ST3	Q8IZP7	471 aa		11.7	□□□□□ -0.54
ZNF559-209	ENST00000591652	ZNF710	Q8N1W2	664 aa		11.69	□□□□□ -0.54
ZNF559-209	ENST00000591652	CHGA	P10645	457 aa	Known RBP	11.65	□□□□□ -0.54

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