RNA–Protein interactions for RNA: ENST00000587206.1

ABCA8-209, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 5

Gene ABCA8, Length 925 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-209ENST00000587206 LHX8Q68G74 356 aa12.2□□□□□ -0.46
ABCA8-209ENST00000587206 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
ABCA8-209ENST00000587206 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
ABCA8-209ENST00000587206 NUBP1P53384 320 aa12.16□□□□□ -0.46
ABCA8-209ENST00000587206 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
ABCA8-209ENST00000587206 ZBTB47Q9UFB7 747 aaPredicted RBP12.15□□□□□ -0.46
ABCA8-209ENST00000587206 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
ABCA8-209ENST00000587206 MAP3K13O43283 966 aa12.1□□□□□ -0.47
ABCA8-209ENST00000587206 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
ABCA8-209ENST00000587206 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
ABCA8-209ENST00000587206 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
ABCA8-209ENST00000587206 ASTLQ6HA08 431 aaPredicted RBP12.04□□□□□ -0.48
ABCA8-209ENST00000587206 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
ABCA8-209ENST00000587206 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
ABCA8-209ENST00000587206 ATN1P54259 1190 aaPredicted RBP12□□□□□ -0.49
ABCA8-209ENST00000587206 DCAF8Q5TAQ9 597 aa12□□□□□ -0.49
ABCA8-209ENST00000587206 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
ABCA8-209ENST00000587206 BMP2KQ9NSY1 1161 aaPredicted RBP11.99□□□□□ -0.49
ABCA8-209ENST00000587206 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
ABCA8-209ENST00000587206 METRNQ9UJH8 293 aa11.95□□□□□ -0.5
ABCA8-209ENST00000587206 PYGBP11216 843 aa11.94□□□□□ -0.5
ABCA8-209ENST00000587206 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
ABCA8-209ENST00000587206 SLC39A7Q92504 469 aa11.93□□□□□ -0.5
ABCA8-209ENST00000587206 C7P10643 843 aa11.92□□□□□ -0.5
ABCA8-209ENST00000587206 TIE1P35590 1138 aa11.92□□□□□ -0.5
ABCA8-209ENST00000587206 IFNLR1Q8IU57 520 aaPredicted RBP11.92□□□□□ -0.5
ABCA8-209ENST00000587206 SGIP1Q9BQI5 828 aa11.92□□□□□ -0.5
ABCA8-209ENST00000587206 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
ABCA8-209ENST00000587206 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
ABCA8-209ENST00000587206 POTEJP0CG39 1038 aa11.85□□□□□ -0.51
ABCA8-209ENST00000587206 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
ABCA8-209ENST00000587206 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
ABCA8-209ENST00000587206 GSE1Q14687 1217 aa11.83□□□□□ -0.52
ABCA8-209ENST00000587206 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
ABCA8-209ENST00000587206 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
ABCA8-209ENST00000587206 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
ABCA8-209ENST00000587206 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
ABCA8-209ENST00000587206 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
ABCA8-209ENST00000587206 SEC24BO95487 1268 aa11.76□□□□□ -0.53
ABCA8-209ENST00000587206 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
ABCA8-209ENST00000587206 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
ABCA8-209ENST00000587206 IER5LQ5T953 404 aa11.71□□□□□ -0.53
ABCA8-209ENST00000587206 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
ABCA8-209ENST00000587206 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
ABCA8-209ENST00000587206 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
ABCA8-209ENST00000587206 SCUBE2Q9NQ36 999 aa11.65□□□□□ -0.54
ABCA8-209ENST00000587206 IRX5P78411 483 aaPredicted RBP11.64□□□□□ -0.55
ABCA8-209ENST00000587206 PLCG2P16885 1265 aa11.63□□□□□ -0.55
ABCA8-209ENST00000587206 PSEN1P49768 467 aa11.63□□□□□ -0.55
ABCA8-209ENST00000587206 OCEL1Q9H607 264 aa11.59□□□□□ -0.55
ABCA8-209ENST00000587206 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
ABCA8-209ENST00000587206 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
ABCA8-209ENST00000587206 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
ABCA8-209ENST00000587206 FAM163AQ96GL9 167 aaPredicted RBP11.52□□□□□ -0.57
ABCA8-209ENST00000587206 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
ABCA8-209ENST00000587206 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
ABCA8-209ENST00000587206 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
ABCA8-209ENST00000587206 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
ABCA8-209ENST00000587206 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.57
ABCA8-209ENST00000587206 POTEMA6NI47 508 aa11.47□□□□□ -0.57
ABCA8-209ENST00000587206 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
ABCA8-209ENST00000587206 POTEGQ6S5H5 508 aa11.45□□□□□ -0.58
ABCA8-209ENST00000587206 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
ABCA8-209ENST00000587206 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
ABCA8-209ENST00000587206 RIOK3O14730 519 aaKnown RBP11.42□□□□□ -0.58
ABCA8-209ENST00000587206 ILDR1Q86SU0 546 aaPredicted RBP11.4□□□□□ -0.58
ABCA8-209ENST00000587206 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
ABCA8-209ENST00000587206 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
ABCA8-209ENST00000587206 L3MBTL3Q96JM7 780 aaPredicted RBP11.38□□□□□ -0.59
ABCA8-209ENST00000587206 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.37□□□□□ -0.59
ABCA8-209ENST00000587206 ZFP91Q96JP5 570 aaPredicted RBP11.37□□□□□ -0.59
ABCA8-209ENST00000587206 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
ABCA8-209ENST00000587206 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
ABCA8-209ENST00000587206 ST18O60284 1047 aa11.31□□□□□ -0.6
ABCA8-209ENST00000587206 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
ABCA8-209ENST00000587206 PKD2Q13563 968 aa11.3□□□□□ -0.6
ABCA8-209ENST00000587206 PLSCR2Q9NRY7 297 aa11.3□□□□□ -0.6
ABCA8-209ENST00000587206 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
ABCA8-209ENST00000587206 G3V3G9 751 aa11.26□□□□□ -0.61
ABCA8-209ENST00000587206 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
ABCA8-209ENST00000587206 PHF8Q9UPP1 1060 aa11.25□□□□□ -0.61
ABCA8-209ENST00000587206 RGL2O15211 777 aa11.24□□□□□ -0.61
ABCA8-209ENST00000587206 SOX12O15370 315 aa11.23□□□□□ -0.61
ABCA8-209ENST00000587206 MS4A4AQ96JQ5 239 aa11.23□□□□□ -0.61
ABCA8-209ENST00000587206 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
ABCA8-209ENST00000587206 SNPHO15079 494 aa11.22□□□□□ -0.61
ABCA8-209ENST00000587206 STK25O00506 426 aa11.2□□□□□ -0.62
ABCA8-209ENST00000587206 TMEM121BQ9BXQ6 578 aaPredicted RBP11.2□□□□□ -0.62
ABCA8-209ENST00000587206 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
ABCA8-209ENST00000587206 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
ABCA8-209ENST00000587206 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
ABCA8-209ENST00000587206 MICALL2Q8IY33 904 aa11.17□□□□□ -0.62
ABCA8-209ENST00000587206 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
ABCA8-209ENST00000587206 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
ABCA8-209ENST00000587206 NLRP6P59044 892 aa11.13□□□□□ -0.63
ABCA8-209ENST00000587206 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
ABCA8-209ENST00000587206 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
ABCA8-209ENST00000587206 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
ABCA8-209ENST00000587206 EMP3P54852 163 aa11.06□□□□□ -0.64
ABCA8-209ENST00000587206 DAXXQ9UER7 740 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms