RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
VAPA-208ENST00000584796 LHX8Q68G74 356 aa10.44□□□□□ -0.74
VAPA-208ENST00000584796 MS4A3Q96HJ5 214 aa10.44□□□□□ -0.74
VAPA-208ENST00000584796 NUBP1P53384 320 aa10.43□□□□□ -0.74
VAPA-208ENST00000584796 KIF12Q96FN5 646 aa10.42□□□□□ -0.74
VAPA-208ENST00000584796 ASTLQ6HA08 431 aaPredicted RBP10.37□□□□□ -0.75
VAPA-208ENST00000584796 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
VAPA-208ENST00000584796 MAP3K13O43283 966 aa10.34□□□□□ -0.75
VAPA-208ENST00000584796 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
VAPA-208ENST00000584796 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
VAPA-208ENST00000584796 FAM212AQ96EL1 285 aa10.33□□□□□ -0.76
VAPA-208ENST00000584796 SGIP1Q9BQI5 828 aa10.3□□□□□ -0.76
VAPA-208ENST00000584796 TRPC6Q9Y210 931 aa10.29□□□□□ -0.76
VAPA-208ENST00000584796 TIE1P35590 1138 aa10.27□□□□□ -0.77
VAPA-208ENST00000584796 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
VAPA-208ENST00000584796 ATN1P54259 1190 aaPredicted RBP10.26□□□□□ -0.77
VAPA-208ENST00000584796 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
VAPA-208ENST00000584796 METRNQ9UJH8 293 aa10.25□□□□□ -0.77
VAPA-208ENST00000584796 PCDHB13Q9Y5F0 798 aa10.25□□□□□ -0.77
VAPA-208ENST00000584796 POTEB2H3BUK9 544 aa10.24□□□□□ -0.77
VAPA-208ENST00000584796 C7P10643 843 aa10.24□□□□□ -0.77
VAPA-208ENST00000584796 KLHL34Q8N239 644 aa10.24□□□□□ -0.77
VAPA-208ENST00000584796 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
VAPA-208ENST00000584796 TTLL13PA6NNM8 815 aa10.21□□□□□ -0.77
VAPA-208ENST00000584796 IFNL1Q8IU54 200 aa10.21□□□□□ -0.77
VAPA-208ENST00000584796 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
VAPA-208ENST00000584796 PYGBP11216 843 aa10.18□□□□□ -0.78
VAPA-208ENST00000584796 GSE1Q14687 1217 aa10.17□□□□□ -0.78
VAPA-208ENST00000584796 OTUD5Q96G74 571 aa10.17□□□□□ -0.78
VAPA-208ENST00000584796 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
VAPA-208ENST00000584796 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
VAPA-208ENST00000584796 SPOCK2Q92563 424 aa10.13□□□□□ -0.79
VAPA-208ENST00000584796 TRIM35Q9UPQ4 493 aa10.13□□□□□ -0.79
VAPA-208ENST00000584796 IER5LQ5T953 404 aa10.11□□□□□ -0.79
VAPA-208ENST00000584796 TMEM106CQ9BVX2 250 aa10.11□□□□□ -0.79
VAPA-208ENST00000584796 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
VAPA-208ENST00000584796 PCDHB8Q9UN66 801 aa10.09□□□□□ -0.79
VAPA-208ENST00000584796 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
VAPA-208ENST00000584796 ZNF467Q7Z7K2 595 aaPredicted RBP10.06□□□□□ -0.8
VAPA-208ENST00000584796 MAMSTRQ6ZN01 415 aa10.05□□□□□ -0.8
VAPA-208ENST00000584796 SEC24BO95487 1268 aa10.04□□□□□ -0.8
VAPA-208ENST00000584796 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
VAPA-208ENST00000584796 IRX5P78411 483 aaPredicted RBP10□□□□□ -0.81
VAPA-208ENST00000584796 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
VAPA-208ENST00000584796 PLCG2P16885 1265 aa9.96□□□□□ -0.82
VAPA-208ENST00000584796 PSEN1P49768 467 aa9.95□□□□□ -0.82
VAPA-208ENST00000584796 TRIM41Q8WV44 630 aa9.95□□□□□ -0.82
VAPA-208ENST00000584796 PDAP1Q13442 181 aaKnown RBP9.94□□□□□ -0.82
VAPA-208ENST00000584796 OCEL1Q9H607 264 aa9.94□□□□□ -0.82
VAPA-208ENST00000584796 MKRN3Q13064 507 aaKnown RBP9.88□□□□□ -0.83
VAPA-208ENST00000584796 PDCD7Q8N8D1 485 aaKnown RBP9.88□□□□□ -0.83
VAPA-208ENST00000584796 GOLGA2Q08379 1002 aa9.87□□□□□ -0.83
VAPA-208ENST00000584796 ILDR1Q86SU0 546 aaPredicted RBP9.85□□□□□ -0.83
VAPA-208ENST00000584796 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
VAPA-208ENST00000584796 RNF25Q96BH1 459 aaPredicted RBP9.82□□□□□ -0.84
VAPA-208ENST00000584796 CABP2Q9NPB3 220 aa9.82□□□□□ -0.84
VAPA-208ENST00000584796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.82□□□□□ -0.841e-7■■□□□ 12.4
VAPA-208ENST00000584796 POTEMA6NI47 508 aa9.81□□□□□ -0.84
VAPA-208ENST00000584796 SLAIN1Q8ND83 568 aa9.81□□□□□ -0.84
VAPA-208ENST00000584796 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
VAPA-208ENST00000584796 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
VAPA-208ENST00000584796 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
VAPA-208ENST00000584796 L3MBTL3Q96JM7 780 aaPredicted RBP9.78□□□□□ -0.84
VAPA-208ENST00000584796 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
VAPA-208ENST00000584796 VGFO15240 615 aaPredicted RBP9.74□□□□□ -0.85
VAPA-208ENST00000584796 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
VAPA-208ENST00000584796 EFCAB3Q8N7B9 438 aa9.73□□□□□ -0.85
VAPA-208ENST00000584796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
VAPA-208ENST00000584796 C3orf67Q6ZVT6 689 aa9.72□□□□□ -0.85
VAPA-208ENST00000584796 ZFP91Q96JP5 570 aaPredicted RBP9.72□□□□□ -0.85
VAPA-208ENST00000584796 ST18O60284 1047 aa9.68□□□□□ -0.86
VAPA-208ENST00000584796 PKD2Q13563 968 aa9.68□□□□□ -0.86
VAPA-208ENST00000584796 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
VAPA-208ENST00000584796 BOLA1Q9Y3E2 137 aa9.68□□□□□ -0.86
VAPA-208ENST00000584796 SNPHO15079 494 aa9.66□□□□□ -0.86
VAPA-208ENST00000584796 SOX12O15370 315 aa9.66□□□□□ -0.86
VAPA-208ENST00000584796 ECM2O94769 699 aaPredicted RBP9.66□□□□□ -0.86
VAPA-208ENST00000584796 TMEM121BQ9BXQ6 578 aaPredicted RBP9.65□□□□□ -0.86
VAPA-208ENST00000584796 TAOK2Q9UL54 1235 aa9.65□□□□□ -0.86
VAPA-208ENST00000584796 G3V3G9 751 aa9.63□□□□□ -0.87
VAPA-208ENST00000584796 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
VAPA-208ENST00000584796 BCL11BQ9C0K0 894 aaPredicted RBP9.62□□□□□ -0.87
VAPA-208ENST00000584796 PHF8Q9UPP1 1060 aa9.61□□□□□ -0.87
VAPA-208ENST00000584796 RGL2O15211 777 aa9.6□□□□□ -0.87
VAPA-208ENST00000584796 PLSCR2Q9NRY7 297 aa9.6□□□□□ -0.87
VAPA-208ENST00000584796 MICALL2Q8IY33 904 aa9.58□□□□□ -0.88
VAPA-208ENST00000584796 STK24Q9Y6E0 443 aa9.58□□□□□ -0.88
VAPA-208ENST00000584796 STK25O00506 426 aa9.57□□□□□ -0.88
VAPA-208ENST00000584796 FBXO22Q8NEZ5 403 aa9.56□□□□□ -0.88
VAPA-208ENST00000584796 NLRP6P59044 892 aa9.55□□□□□ -0.88
VAPA-208ENST00000584796 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
VAPA-208ENST00000584796 MFRPQ9BY79 579 aa9.54□□□□□ -0.88
VAPA-208ENST00000584796 HOXB3P14651 431 aaPredicted RBP9.53□□□□□ -0.88
VAPA-208ENST00000584796 TMEM92Q6UXU6 159 aa9.52□□□□□ -0.89
VAPA-208ENST00000584796 MARVELD3Q96A59 401 aa9.51□□□□□ -0.89
VAPA-208ENST00000584796 EMP3P54852 163 aa9.47□□□□□ -0.89
VAPA-208ENST00000584796 DOK7Q18PE1 504 aa9.46□□□□□ -0.9
VAPA-208ENST00000584796 HOXB1P14653 301 aaPredicted RBP9.43□□□□□ -0.9
VAPA-208ENST00000584796 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
VAPA-208ENST00000584796 ZNF710Q8N1W2 664 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms