RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PHF12Q96QT6 1004 aa13.01□□□□□ -0.33
COPS3-217ENST00000583160 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
COPS3-217ENST00000583160 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
COPS3-217ENST00000583160 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
COPS3-217ENST00000583160 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
COPS3-217ENST00000583160 GALR2O43603 387 aaPredicted RBP12.91□□□□□ -0.34
COPS3-217ENST00000583160 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
COPS3-217ENST00000583160 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
COPS3-217ENST00000583160 MAP3K13O43283 966 aa12.84□□□□□ -0.35
COPS3-217ENST00000583160 GSE1Q14687 1217 aa12.84□□□□□ -0.35
COPS3-217ENST00000583160 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
COPS3-217ENST00000583160 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
COPS3-217ENST00000583160 PYGBP11216 843 aa12.79□□□□□ -0.36
COPS3-217ENST00000583160 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
COPS3-217ENST00000583160 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
COPS3-217ENST00000583160 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
COPS3-217ENST00000583160 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
COPS3-217ENST00000583160 IFNL1Q8IU54 200 aa12.7□□□□□ -0.38
COPS3-217ENST00000583160 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
COPS3-217ENST00000583160 ATMINO43313 823 aaPredicted RBP12.66□□□□□ -0.38
COPS3-217ENST00000583160 ASTLQ6HA08 431 aaPredicted RBP12.66□□□□□ -0.38
COPS3-217ENST00000583160 TIE1P35590 1138 aa12.65□□□□□ -0.38
COPS3-217ENST00000583160 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
COPS3-217ENST00000583160 PCDHB8Q9UN66 801 aa12.64□□□□□ -0.39
COPS3-217ENST00000583160 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
COPS3-217ENST00000583160 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
COPS3-217ENST00000583160 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
COPS3-217ENST00000583160 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
COPS3-217ENST00000583160 TTLL13PA6NNM8 815 aa12.59□□□□□ -0.39
COPS3-217ENST00000583160 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
COPS3-217ENST00000583160 SLC39A7Q92504 469 aa12.53□□□□□ -0.4
COPS3-217ENST00000583160 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
COPS3-217ENST00000583160 C7P10643 843 aa12.51□□□□□ -0.41
COPS3-217ENST00000583160 LHX8Q68G74 356 aa12.5□□□□□ -0.41
COPS3-217ENST00000583160 METRNQ9UJH8 293 aa12.5□□□□□ -0.41
COPS3-217ENST00000583160 PSEN1P49768 467 aa12.49□□□□□ -0.41
COPS3-217ENST00000583160 PKD2Q13563 968 aa12.48□□□□□ -0.41
COPS3-217ENST00000583160 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
COPS3-217ENST00000583160 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
COPS3-217ENST00000583160 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
COPS3-217ENST00000583160 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
COPS3-217ENST00000583160 IER5LQ5T953 404 aa12.41□□□□□ -0.42
COPS3-217ENST00000583160 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
COPS3-217ENST00000583160 POTEFA5A3E0 1075 aa12.39□□□□□ -0.43
COPS3-217ENST00000583160 SEC24BO95487 1268 aa12.38□□□□□ -0.43
COPS3-217ENST00000583160 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
COPS3-217ENST00000583160 COLQQ9Y215 455 aaPredicted RBP12.37□□□□□ -0.43
COPS3-217ENST00000583160 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
COPS3-217ENST00000583160 RGL2O15211 777 aa12.35□□□□□ -0.43
COPS3-217ENST00000583160 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
COPS3-217ENST00000583160 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
COPS3-217ENST00000583160 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
COPS3-217ENST00000583160 IRX5P78411 483 aaPredicted RBP12.33□□□□□ -0.44
COPS3-217ENST00000583160 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
COPS3-217ENST00000583160 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
COPS3-217ENST00000583160 PLCG2P16885 1265 aa12.31□□□□□ -0.44
COPS3-217ENST00000583160 OCEL1Q9H607 264 aa12.3□□□□□ -0.44
COPS3-217ENST00000583160 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
COPS3-217ENST00000583160 OTUD5Q96G74 571 aa12.25□□□□□ -0.45
COPS3-217ENST00000583160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.45
COPS3-217ENST00000583160 EFCAB3Q8N7B9 438 aa12.24□□□□□ -0.45
COPS3-217ENST00000583160 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
COPS3-217ENST00000583160 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
COPS3-217ENST00000583160 STK25O00506 426 aa12.21□□□□□ -0.45
COPS3-217ENST00000583160 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.45
COPS3-217ENST00000583160 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
COPS3-217ENST00000583160 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
COPS3-217ENST00000583160 SCUBE2Q9NQ36 999 aa12.18□□□□□ -0.46
COPS3-217ENST00000583160 SOX12O15370 315 aa12.15□□□□□ -0.46
COPS3-217ENST00000583160 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
COPS3-217ENST00000583160 L3MBTL3Q96JM7 780 aaPredicted RBP12.12□□□□□ -0.47
COPS3-217ENST00000583160 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
COPS3-217ENST00000583160 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
COPS3-217ENST00000583160 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
COPS3-217ENST00000583160 NLRP6P59044 892 aa12.06□□□□□ -0.48
COPS3-217ENST00000583160 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
COPS3-217ENST00000583160 MS4A4AQ96JQ5 239 aa12.06□□□□□ -0.48
COPS3-217ENST00000583160 G3V3G9 751 aa12.04□□□□□ -0.48
COPS3-217ENST00000583160 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
COPS3-217ENST00000583160 MFRPQ9BY79 579 aa12.04□□□□□ -0.48
COPS3-217ENST00000583160 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
COPS3-217ENST00000583160 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
COPS3-217ENST00000583160 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
COPS3-217ENST00000583160 SLAIN1Q8ND83 568 aa12.03□□□□□ -0.48
COPS3-217ENST00000583160 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
COPS3-217ENST00000583160 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
COPS3-217ENST00000583160 TMEM121BQ9BXQ6 578 aaPredicted RBP11.97□□□□□ -0.49
COPS3-217ENST00000583160 MICALL2Q8IY33 904 aa11.95□□□□□ -0.5
COPS3-217ENST00000583160 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
COPS3-217ENST00000583160 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
COPS3-217ENST00000583160 FAM163AQ96GL9 167 aaPredicted RBP11.89□□□□□ -0.51
COPS3-217ENST00000583160 PPP1R37O75864 691 aa11.88□□□□□ -0.51
COPS3-217ENST00000583160 TMEM92Q6UXU6 159 aa11.84□□□□□ -0.51
COPS3-217ENST00000583160 SNPHO15079 494 aa11.82□□□□□ -0.52
COPS3-217ENST00000583160 RYDENQ9NUL5 291 aaKnown RBP11.82□□□□□ -0.52
COPS3-217ENST00000583160 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
COPS3-217ENST00000583160 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
COPS3-217ENST00000583160 ST18O60284 1047 aa11.76□□□□□ -0.53
COPS3-217ENST00000583160 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
COPS3-217ENST00000583160 POTEMA6NI47 508 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms