RNA–Protein interactions for RNA: ENST00000581442.5

GAPLINC-204, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 450 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-204ENST00000581442 CCDC61Q9Y6R9 512 aa9.59□□□□□ -0.87
GAPLINC-204ENST00000581442 GALR2O43603 387 aaPredicted RBP9.58□□□□□ -0.88
GAPLINC-204ENST00000581442 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
GAPLINC-204ENST00000581442 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
GAPLINC-204ENST00000581442 FAM212AQ96EL1 285 aa9.55□□□□□ -0.88
GAPLINC-204ENST00000581442 POTEIP0CG38 1075 aa9.53□□□□□ -0.88
GAPLINC-204ENST00000581442 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
GAPLINC-204ENST00000581442 KIF12Q96FN5 646 aa9.51□□□□□ -0.89
GAPLINC-204ENST00000581442 DCAF8Q5TAQ9 597 aa9.47□□□□□ -0.89
GAPLINC-204ENST00000581442 SPOCK2Q92563 424 aa9.47□□□□□ -0.89
GAPLINC-204ENST00000581442 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
GAPLINC-204ENST00000581442 MAP3K13O43283 966 aa9.45□□□□□ -0.9
GAPLINC-204ENST00000581442 ASTLQ6HA08 431 aaPredicted RBP9.44□□□□□ -0.9
GAPLINC-204ENST00000581442 GSE1Q14687 1217 aa9.43□□□□□ -0.9
GAPLINC-204ENST00000581442 LHX8Q68G74 356 aa9.42□□□□□ -0.9
GAPLINC-204ENST00000581442 PCDHB13Q9Y5F0 798 aa9.42□□□□□ -0.9
GAPLINC-204ENST00000581442 PYGBP11216 843 aa9.4□□□□□ -0.9
GAPLINC-204ENST00000581442 TIE1P35590 1138 aa9.4□□□□□ -0.9
GAPLINC-204ENST00000581442 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
GAPLINC-204ENST00000581442 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
GAPLINC-204ENST00000581442 SLC39A7Q92504 469 aa9.37□□□□□ -0.91
GAPLINC-204ENST00000581442 IFNL1Q8IU54 200 aa9.36□□□□□ -0.91
GAPLINC-204ENST00000581442 BMP2KQ9NSY1 1161 aaPredicted RBP9.36□□□□□ -0.91
GAPLINC-204ENST00000581442 CIZ1Q9ULV3 898 aaPredicted RBP9.36□□□□□ -0.91
GAPLINC-204ENST00000581442 C7P10643 843 aa9.34□□□□□ -0.91
GAPLINC-204ENST00000581442 PELP1Q8IZL8 1130 aaKnown RBP9.34□□□□□ -0.91
GAPLINC-204ENST00000581442 ATN1P54259 1190 aaPredicted RBP9.33□□□□□ -0.92
GAPLINC-204ENST00000581442 METRNQ9UJH8 293 aa9.33□□□□□ -0.92
GAPLINC-204ENST00000581442 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
GAPLINC-204ENST00000581442 CHRM1P11229 460 aaPredicted RBP9.31□□□□□ -0.92
GAPLINC-204ENST00000581442 PCDHB8Q9UN66 801 aa9.31□□□□□ -0.92
GAPLINC-204ENST00000581442 ZNF467Q7Z7K2 595 aaPredicted RBP9.3□□□□□ -0.92
GAPLINC-204ENST00000581442 IER5LQ5T953 404 aa9.27□□□□□ -0.93
GAPLINC-204ENST00000581442 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
GAPLINC-204ENST00000581442 TMEM106CQ9BVX2 250 aa9.27□□□□□ -0.93
GAPLINC-204ENST00000581442 TRIM35Q9UPQ4 493 aa9.26□□□□□ -0.93
GAPLINC-204ENST00000581442 SEC24BO95487 1268 aa9.21□□□□□ -0.94
GAPLINC-204ENST00000581442 POTEB2H3BUK9 544 aa9.2□□□□□ -0.94
GAPLINC-204ENST00000581442 MAMSTRQ6ZN01 415 aa9.2□□□□□ -0.94
GAPLINC-204ENST00000581442 PKD2Q13563 968 aa9.18□□□□□ -0.94
GAPLINC-204ENST00000581442 RNF25Q96BH1 459 aaPredicted RBP9.18□□□□□ -0.94
GAPLINC-204ENST00000581442 POTEFA5A3E0 1075 aa9.17□□□□□ -0.94
GAPLINC-204ENST00000581442 PSEN1P49768 467 aa9.17□□□□□ -0.94
GAPLINC-204ENST00000581442 PDAP1Q13442 181 aaKnown RBP9.17□□□□□ -0.94
GAPLINC-204ENST00000581442 OTUD5Q96G74 571 aa9.16□□□□□ -0.94
GAPLINC-204ENST00000581442 PLCG2P16885 1265 aa9.15□□□□□ -0.94
GAPLINC-204ENST00000581442 SCUBE2Q9NQ36 999 aa9.15□□□□□ -0.94
GAPLINC-204ENST00000581442 GOLGA2Q08379 1002 aa9.14□□□□□ -0.95
GAPLINC-204ENST00000581442 COLQQ9Y215 455 aaPredicted RBP9.14□□□□□ -0.95
GAPLINC-204ENST00000581442 RIOK3O14730 519 aaKnown RBP9.12□□□□□ -0.95
GAPLINC-204ENST00000581442 ECM2O94769 699 aaPredicted RBP9.12□□□□□ -0.95
GAPLINC-204ENST00000581442 IRX5P78411 483 aaPredicted RBP9.12□□□□□ -0.95
GAPLINC-204ENST00000581442 POTEJP0CG39 1038 aa9.11□□□□□ -0.95
GAPLINC-204ENST00000581442 MKRN3Q13064 507 aaKnown RBP9.11□□□□□ -0.95
GAPLINC-204ENST00000581442 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
GAPLINC-204ENST00000581442 RGL2O15211 777 aa9.08□□□□□ -0.96
GAPLINC-204ENST00000581442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.06□□□□□ -0.96
GAPLINC-204ENST00000581442 VGFO15240 615 aaPredicted RBP9.06□□□□□ -0.96
GAPLINC-204ENST00000581442 ZFP91Q96JP5 570 aaPredicted RBP9.06□□□□□ -0.96
GAPLINC-204ENST00000581442 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
GAPLINC-204ENST00000581442 TAOK2Q9UL54 1235 aa9.05□□□□□ -0.96
GAPLINC-204ENST00000581442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.03□□□□□ -0.96
GAPLINC-204ENST00000581442 PDCD7Q8N8D1 485 aaKnown RBP9.02□□□□□ -0.97
GAPLINC-204ENST00000581442 ILDR1Q86SU0 546 aaPredicted RBP9□□□□□ -0.97
GAPLINC-204ENST00000581442 EFCAB3Q8N7B9 438 aa9□□□□□ -0.97
GAPLINC-204ENST00000581442 L3MBTL3Q96JM7 780 aaPredicted RBP9□□□□□ -0.97
GAPLINC-204ENST00000581442 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
GAPLINC-204ENST00000581442 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.96□□□□□ -0.98
GAPLINC-204ENST00000581442 STK25O00506 426 aa8.95□□□□□ -0.98
GAPLINC-204ENST00000581442 DPY19L2Q6NUT2 758 aa8.95□□□□□ -0.98
GAPLINC-204ENST00000581442 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
GAPLINC-204ENST00000581442 SLAIN1Q8ND83 568 aa8.95□□□□□ -0.98
GAPLINC-204ENST00000581442 STK24Q9Y6E0 443 aa8.95□□□□□ -0.98
GAPLINC-204ENST00000581442 G3V3G9 751 aa8.93□□□□□ -0.98
GAPLINC-204ENST00000581442 SOX12O15370 315 aa8.93□□□□□ -0.98
GAPLINC-204ENST00000581442 PHF8Q9UPP1 1060 aa8.91□□□□□ -0.98
GAPLINC-204ENST00000581442 MS4A4AQ96JQ5 239 aa8.9□□□□□ -0.98
GAPLINC-204ENST00000581442 BOLA1Q9Y3E2 137 aa8.89□□□□□ -0.99
GAPLINC-204ENST00000581442 SNPHO15079 494 aa8.87□□□□□ -0.99
GAPLINC-204ENST00000581442 MFRPQ9BY79 579 aa8.87□□□□□ -0.99
GAPLINC-204ENST00000581442 HS6ST3Q8IZP7 471 aa8.86□□□□□ -0.99
GAPLINC-204ENST00000581442 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
GAPLINC-204ENST00000581442 FAM163AQ96GL9 167 aaPredicted RBP8.86□□□□□ -0.99
GAPLINC-204ENST00000581442 POTEMA6NI47 508 aa8.85□□□□□ -0.99
GAPLINC-204ENST00000581442 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
GAPLINC-204ENST00000581442 NLRP6P59044 892 aa8.84□□□□□ -0.99
GAPLINC-204ENST00000581442 POTEGQ6S5H5 508 aa8.84□□□□□ -0.99
GAPLINC-204ENST00000581442 LCE2DQ5TA82 110 aaPredicted RBP8.83□□□□□ -1
GAPLINC-204ENST00000581442 TMEM121BQ9BXQ6 578 aaPredicted RBP8.83□□□□□ -1
GAPLINC-204ENST00000581442 RTN4Q9NQC3 1192 aaKnown RBP8.83□□□□□ -1
GAPLINC-204ENST00000581442 AMER1Q5JTC6 1135 aaPredicted RBP8.81□□□□□ -1
GAPLINC-204ENST00000581442 MICALL2Q8IY33 904 aa8.8□□□□□ -1
GAPLINC-204ENST00000581442 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
GAPLINC-204ENST00000581442 NKX1-1Q15270 411 aaPredicted RBP8.78□□□□□ -1
GAPLINC-204ENST00000581442 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
GAPLINC-204ENST00000581442 ST18O60284 1047 aa8.77□□□□□ -1.01
GAPLINC-204ENST00000581442 DNAJC5Q9H3Z4 198 aa8.77□□□□□ -1.01
GAPLINC-204ENST00000581442 PPP1R37O75864 691 aa8.75□□□□□ -1.01
GAPLINC-204ENST00000581442 TMEM92Q6UXU6 159 aa8.74□□□□□ -1.01
GAPLINC-204ENST00000581442 DOK7Q18PE1 504 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms