RNA–Protein interactions for RNA: ENST00000580465.5

BPTF-213, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-213ENST00000580465 BCCIPQ9P287 314 aaKnown RBP eCLIP9.21□□□□□ -0.94
BPTF-213ENST00000580465 DEKP35659 375 aaKnown RBP9.19□□□□□ -0.94
BPTF-213ENST00000580465 NAP1L5Q96NT1 182 aaPredicted RBP9.19□□□□□ -0.94
BPTF-213ENST00000580465 CCDC180Q9P1Z9 1646 aa9.19□□□□□ -0.94
BPTF-213ENST00000580465 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
BPTF-213ENST00000580465 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.95
BPTF-213ENST00000580465 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.95
BPTF-213ENST00000580465 SHROOM4Q9ULL8 1493 aa9.11□□□□□ -0.95
BPTF-213ENST00000580465 HMGB1P09429 215 aaKnown RBP9.1□□□□□ -0.95
BPTF-213ENST00000580465 FKBP8Q14318 412 aa9.1□□□□□ -0.95
BPTF-213ENST00000580465 DCAF1Q9Y4B6 1507 aa9.09□□□□□ -0.95
BPTF-213ENST00000580465 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
BPTF-213ENST00000580465 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
BPTF-213ENST00000580465 NAP1L2Q9ULW6 460 aaPredicted RBP9.03□□□□□ -0.96
BPTF-213ENST00000580465 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
BPTF-213ENST00000580465 IPO4Q8TEX9 1081 aaKnown RBP9□□□□□ -0.97
BPTF-213ENST00000580465 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
BPTF-213ENST00000580465 TEX2Q8IWB9 1127 aa8.97□□□□□ -0.97
BPTF-213ENST00000580465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.97□□□□□ -0.97
BPTF-213ENST00000580465 HNRNPUL2Q1KMD3 747 aaKnown RBP8.97□□□□□ -0.97
BPTF-213ENST00000580465 POLR3GLQ9BT43 218 aa8.97□□□□□ -0.97
BPTF-213ENST00000580465 CHRM1P11229 460 aaPredicted RBP8.96□□□□□ -0.98
BPTF-213ENST00000580465 UBTFP17480 764 aaKnown RBP8.96□□□□□ -0.98
BPTF-213ENST00000580465 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
BPTF-213ENST00000580465 SUPT5HO00267 1087 aaKnown RBP8.95□□□□□ -0.98
BPTF-213ENST00000580465 SUPT16HQ9Y5B9 1047 aaKnown RBP8.95□□□□□ -0.98
BPTF-213ENST00000580465 FANCIQ9NVI1 1328 aa8.93□□□□□ -0.98
BPTF-213ENST00000580465 NCLP19338 710 aaKnown RBP8.93□□□□□ -0.98
BPTF-213ENST00000580465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.93□□□□□ -0.981e-7■■■□□ 15.8
BPTF-213ENST00000580465 IGSF3O75054 1194 aa8.92□□□□□ -0.98
BPTF-213ENST00000580465 ZFP91Q96JP5 570 aaPredicted RBP8.92□□□□□ -0.98
BPTF-213ENST00000580465 ATF5Q9Y2D1 282 aaPredicted RBP8.92□□□□□ -0.98
BPTF-213ENST00000580465 TICAM2Q86XR7 235 aa8.91□□□□□ -0.98
BPTF-213ENST00000580465 IL27Q8NEV9 243 aa8.91□□□□□ -0.98
BPTF-213ENST00000580465 PUS7Q96PZ0 661 aaKnown RBP8.9□□□□□ -0.98
BPTF-213ENST00000580465 ARID3AQ99856 593 aa8.9□□□□□ -0.98
BPTF-213ENST00000580465 IRX6P78412 446 aaPredicted RBP8.9□□□□□ -0.99
BPTF-213ENST00000580465 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.99
BPTF-213ENST00000580465 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.99
BPTF-213ENST00000580465 YTHDC1Q96MU7 727 aaKnown RBP8.89□□□□□ -0.99
BPTF-213ENST00000580465 DCAF8L1A6NGE4 600 aa8.88□□□□□ -0.99
BPTF-213ENST00000580465 RBM19Q9Y4C8 960 aaKnown RBP8.88□□□□□ -0.99
BPTF-213ENST00000580465 CLSTN1O94985 981 aa8.88□□□□□ -0.99
BPTF-213ENST00000580465 FTSJ3Q8IY81 847 aaKnown RBP8.88□□□□□ -0.99
BPTF-213ENST00000580465 BBXQ8WY36 941 aaPredicted RBP8.87□□□□□ -0.99
BPTF-213ENST00000580465 CHMP4BQ9H444 224 aaKnown RBP8.87□□□□□ -0.99
BPTF-213ENST00000580465 C11orf95C9JLR9 678 aaPredicted RBP8.86□□□□□ -0.99
BPTF-213ENST00000580465 U3KPZ7 1027 aaPredicted RBP8.86□□□□□ -0.99
BPTF-213ENST00000580465 ARID4BQ4LE39 1312 aaPredicted RBP8.85□□□□□ -0.99
BPTF-213ENST00000580465 RRP9O43818 475 aaKnown RBP8.84□□□□□ -0.99
BPTF-213ENST00000580465 CNPY4Q8N129 248 aa8.84□□□□□ -0.99
BPTF-213ENST00000580465 SECISBP2LQ93073 1101 aaKnown RBP8.84□□□□□ -0.99
BPTF-213ENST00000580465 CANXP27824 592 aaKnown RBP8.83□□□□□ -1
BPTF-213ENST00000580465 GTF2E1P29083 439 aaPredicted RBP8.83□□□□□ -1
BPTF-213ENST00000580465 CNGB1Q14028 1251 aaPredicted RBP8.82□□□□□ -1
BPTF-213ENST00000580465 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
BPTF-213ENST00000580465 BRPF3Q9ULD4 1205 aa8.81□□□□□ -1
BPTF-213ENST00000580465 RTL5Q5HYW3 569 aaPredicted RBP8.78□□□□□ -1
BPTF-213ENST00000580465 GRIPAP1Q4V328 841 aa8.77□□□□□ -1
BPTF-213ENST00000580465 ZNF592Q92610 1267 aa8.77□□□□□ -1
BPTF-213ENST00000580465 CALD1Q05682 793 aaKnown RBP8.77□□□□□ -1.01
BPTF-213ENST00000580465 STAC3Q96MF2 364 aa8.77□□□□□ -1.01
BPTF-213ENST00000580465 CFAP44Q96MT7 982 aa8.77□□□□□ -1.01
BPTF-213ENST00000580465 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
BPTF-213ENST00000580465 HSP90AA2PQ14568 343 aaPredicted RBP8.75□□□□□ -1.01
BPTF-213ENST00000580465 ZNF219Q9P2Y4 722 aaPredicted RBP8.75□□□□□ -1.01
BPTF-213ENST00000580465 PTMAP06454 111 aaKnown RBP8.74□□□□□ -1.01
BPTF-213ENST00000580465 WWC1Q8IX03 1113 aa8.74□□□□□ -1.01
BPTF-213ENST00000580465 PSMD1Q99460 953 aa8.74□□□□□ -1.01
BPTF-213ENST00000580465 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
BPTF-213ENST00000580465 PRDM4Q9UKN5 801 aa8.74□□□□□ -1.01
BPTF-213ENST00000580465 PLCD4Q9BRC7 762 aa8.73□□□□□ -1.01
BPTF-213ENST00000580465 NPM1P06748 294 aaKnown RBP eCLIP8.73□□□□□ -1.01
BPTF-213ENST00000580465 NEFMP07197 916 aa8.73□□□□□ -1.01
BPTF-213ENST00000580465 MCCP23508 829 aa8.73□□□□□ -1.01
BPTF-213ENST00000580465 CENPJQ9HC77 1338 aaPredicted RBP8.72□□□□□ -1.01
BPTF-213ENST00000580465 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
BPTF-213ENST00000580465 PTMSP20962 102 aa8.7□□□□□ -1.02
BPTF-213ENST00000580465 TMED8Q6PL24 325 aaPredicted RBP8.7□□□□□ -1.02
BPTF-213ENST00000580465 SETQ01105 290 aaPredicted RBP8.69□□□□□ -1.02
BPTF-213ENST00000580465 KCNG1Q9UIX4 513 aa8.69□□□□□ -1.02
BPTF-213ENST00000580465 FAM43AQ8N2R8 423 aa8.67□□□□□ -1.02
BPTF-213ENST00000580465 TRIM41Q8WV44 630 aa8.67□□□□□ -1.02
BPTF-213ENST00000580465 WASHC2CQ9Y4E1 1318 aa8.67□□□□□ -1.02
BPTF-213ENST00000580465 CLGNO14967 610 aa8.66□□□□□ -1.02
BPTF-213ENST00000580465 FAM193AP78312 1265 aa8.65□□□□□ -1.02
BPTF-213ENST00000580465 CC2D2BQ6DHV5 1058 aa8.65□□□□□ -1.02
BPTF-213ENST00000580465 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
BPTF-213ENST00000580465 SPDYE4A6NLX3 237 aa8.63□□□□□ -1.03
BPTF-213ENST00000580465 CERS3Q8IU89 383 aa8.63□□□□□ -1.03
BPTF-213ENST00000580465 ANP32BQ92688 251 aaKnown RBP8.63□□□□□ -1.03
BPTF-213ENST00000580465 ZNF622Q969S3 477 aaKnown RBP eCLIP8.63□□□□□ -1.031e-6■■■□□ 15.2
BPTF-213ENST00000580465 PROM2Q8N271 834 aa8.62□□□□□ -1.03
BPTF-213ENST00000580465 MMP14P50281 582 aa8.62□□□□□ -1.03
BPTF-213ENST00000580465 PHF14O94880 888 aa8.61□□□□□ -1.03
BPTF-213ENST00000580465 HSP90AA1P07900 732 aaKnown RBP8.61□□□□□ -1.03
BPTF-213ENST00000580465 AXDND1Q5T1B0 1012 aaPredicted RBP8.61□□□□□ -1.03
BPTF-213ENST00000580465 KDM2AQ9Y2K7 1162 aa8.61□□□□□ -1.03
BPTF-213ENST00000580465 WASHC2AQ641Q2 1341 aa8.6□□□□□ -1.03
BPTF-213ENST00000580465 PRDM16Q9HAZ2 1276 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms