RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
DDX42-210ENST00000579539 NUBP1P53384 320 aa11.41□□□□□ -0.58
DDX42-210ENST00000579539 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
DDX42-210ENST00000579539 GALR2O43603 387 aaPredicted RBP11.35□□□□□ -0.59
DDX42-210ENST00000579539 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
DDX42-210ENST00000579539 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
DDX42-210ENST00000579539 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
DDX42-210ENST00000579539 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
DDX42-210ENST00000579539 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
DDX42-210ENST00000579539 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.61
DDX42-210ENST00000579539 DCBLD2Q96PD2 775 aa11.26□□□□□ -0.61
DDX42-210ENST00000579539 MAP3K13O43283 966 aa11.24□□□□□ -0.61
DDX42-210ENST00000579539 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
DDX42-210ENST00000579539 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
DDX42-210ENST00000579539 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
DDX42-210ENST00000579539 TRPC6Q9Y210 931 aa11.16□□□□□ -0.62
DDX42-210ENST00000579539 GSE1Q14687 1217 aa11.15□□□□□ -0.62
DDX42-210ENST00000579539 PYGBP11216 843 aa11.14□□□□□ -0.63
DDX42-210ENST00000579539 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
DDX42-210ENST00000579539 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
DDX42-210ENST00000579539 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
DDX42-210ENST00000579539 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
DDX42-210ENST00000579539 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
DDX42-210ENST00000579539 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
DDX42-210ENST00000579539 BMP2KQ9NSY1 1161 aaPredicted RBP11.09□□□□□ -0.63
DDX42-210ENST00000579539 TIE1P35590 1138 aa11.08□□□□□ -0.64
DDX42-210ENST00000579539 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
DDX42-210ENST00000579539 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
DDX42-210ENST00000579539 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
DDX42-210ENST00000579539 LHX8Q68G74 356 aa11.05□□□□□ -0.64
DDX42-210ENST00000579539 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
DDX42-210ENST00000579539 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
DDX42-210ENST00000579539 C7P10643 843 aa10.99□□□□□ -0.65
DDX42-210ENST00000579539 SLC39A7Q92504 469 aa10.99□□□□□ -0.65
DDX42-210ENST00000579539 TMEM106CQ9BVX2 250 aa10.98□□□□□ -0.65
DDX42-210ENST00000579539 METRNQ9UJH8 293 aa10.98□□□□□ -0.65
DDX42-210ENST00000579539 POTEB2H3BUK9 544 aa10.96□□□□□ -0.65
DDX42-210ENST00000579539 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
DDX42-210ENST00000579539 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
DDX42-210ENST00000579539 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
DDX42-210ENST00000579539 POTEFA5A3E0 1075 aa10.92□□□□□ -0.66
DDX42-210ENST00000579539 PRKCSHP14314 528 aaPredicted RBP10.92□□□□□ -0.66
DDX42-210ENST00000579539 TRIM41Q8WV44 630 aa10.92□□□□□ -0.66
DDX42-210ENST00000579539 BCANQ96GW7 911 aa10.9□□□□□ -0.66
DDX42-210ENST00000579539 PSEN1P49768 467 aa10.88□□□□□ -0.67
DDX42-210ENST00000579539 IER5LQ5T953 404 aa10.88□□□□□ -0.67
DDX42-210ENST00000579539 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
DDX42-210ENST00000579539 POTEJP0CG39 1038 aa10.87□□□□□ -0.67
DDX42-210ENST00000579539 PDAP1Q13442 181 aaKnown RBP10.85□□□□□ -0.67
DDX42-210ENST00000579539 RNF25Q96BH1 459 aaPredicted RBP10.84□□□□□ -0.67
DDX42-210ENST00000579539 OTUD5Q96G74 571 aa10.84□□□□□ -0.67
DDX42-210ENST00000579539 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
DDX42-210ENST00000579539 SEC24BO95487 1268 aa10.83□□□□□ -0.68
DDX42-210ENST00000579539 DCAF8L2P0C7V8 631 aa10.83□□□□□ -0.68
DDX42-210ENST00000579539 IRX5P78411 483 aaPredicted RBP10.81□□□□□ -0.68
DDX42-210ENST00000579539 PKD2Q13563 968 aa10.81□□□□□ -0.68
DDX42-210ENST00000579539 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
DDX42-210ENST00000579539 VSIG10Q8N0Z9 540 aa10.79□□□□□ -0.68
DDX42-210ENST00000579539 ECM2O94769 699 aaPredicted RBP10.76□□□□□ -0.69
DDX42-210ENST00000579539 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
DDX42-210ENST00000579539 PLCG2P16885 1265 aa10.75□□□□□ -0.69
DDX42-210ENST00000579539 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
DDX42-210ENST00000579539 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
DDX42-210ENST00000579539 CABP2Q9NPB3 220 aa10.74□□□□□ -0.69
DDX42-210ENST00000579539 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
DDX42-210ENST00000579539 VGFO15240 615 aaPredicted RBP10.72□□□□□ -0.69
DDX42-210ENST00000579539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.71□□□□□ -0.69
DDX42-210ENST00000579539 PDCD7Q8N8D1 485 aaKnown RBP10.71□□□□□ -0.69
DDX42-210ENST00000579539 ZFP91Q96JP5 570 aaPredicted RBP10.71□□□□□ -0.69
DDX42-210ENST00000579539 ILDR1Q86SU0 546 aaPredicted RBP10.7□□□□□ -0.7
DDX42-210ENST00000579539 RGL2O15211 777 aa10.69□□□□□ -0.7
DDX42-210ENST00000579539 SCUBE2Q9NQ36 999 aa10.69□□□□□ -0.7
DDX42-210ENST00000579539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.69□□□□□ -0.71e-9■■■■■ 39.8
DDX42-210ENST00000579539 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
DDX42-210ENST00000579539 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
DDX42-210ENST00000579539 TPRNQ4KMQ1 711 aa10.66□□□□□ -0.7
DDX42-210ENST00000579539 DPY19L2Q6NUT2 758 aa10.62□□□□□ -0.71
DDX42-210ENST00000579539 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
DDX42-210ENST00000579539 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
DDX42-210ENST00000579539 SOX12O15370 315 aa10.58□□□□□ -0.72
DDX42-210ENST00000579539 L3MBTL3Q96JM7 780 aaPredicted RBP10.58□□□□□ -0.72
DDX42-210ENST00000579539 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
DDX42-210ENST00000579539 STK25O00506 426 aa10.57□□□□□ -0.72
DDX42-210ENST00000579539 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
DDX42-210ENST00000579539 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
DDX42-210ENST00000579539 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
DDX42-210ENST00000579539 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
DDX42-210ENST00000579539 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
DDX42-210ENST00000579539 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.53□□□□□ -0.72
DDX42-210ENST00000579539 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
DDX42-210ENST00000579539 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
DDX42-210ENST00000579539 C3orf67Q6ZVT6 689 aa10.49□□□□□ -0.73
DDX42-210ENST00000579539 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
DDX42-210ENST00000579539 TMEM121BQ9BXQ6 578 aaPredicted RBP10.49□□□□□ -0.73
DDX42-210ENST00000579539 MFRPQ9BY79 579 aa10.49□□□□□ -0.73
DDX42-210ENST00000579539 NLRP6P59044 892 aa10.48□□□□□ -0.73
DDX42-210ENST00000579539 LCE2DQ5TA82 110 aaPredicted RBP10.47□□□□□ -0.73
DDX42-210ENST00000579539 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
DDX42-210ENST00000579539 G3V3G9 751 aa10.45□□□□□ -0.74
DDX42-210ENST00000579539 HS6ST3Q8IZP7 471 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms